RNA–Protein interactions for RNA: ENST00000599459.1

TRPM4-212, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 2

Gene TRPM4, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-212ENST00000599459 PBX4Q9BYU1 374 aa22.14■■□□□ 1.13
TRPM4-212ENST00000599459 MTIF3Q9H2K0 278 aaKnown RBP22.14■■□□□ 1.13
TRPM4-212ENST00000599459 SCN5AQ14524 2016 aa22.14■■□□□ 1.13
TRPM4-212ENST00000599459 TANC1Q9C0D5 1861 aa22.13■■□□□ 1.13
TRPM4-212ENST00000599459 PIK3CDO00329 1044 aa22.13■■□□□ 1.13
TRPM4-212ENST00000599459 PITPNM1O00562 1244 aa22.13■■□□□ 1.13
TRPM4-212ENST00000599459 F2P00734 622 aa22.13■■□□□ 1.13
TRPM4-212ENST00000599459 TGFB3P10600 412 aa22.13■■□□□ 1.13
TRPM4-212ENST00000599459 HOXD8P13378 290 aaPredicted RBP22.13■■□□□ 1.13
TRPM4-212ENST00000599459 PSEN2P49810 448 aa22.13■■□□□ 1.13
TRPM4-212ENST00000599459 EXOSC10Q01780 885 aaKnown RBP22.13■■□□□ 1.13
TRPM4-212ENST00000599459 TSGA10IPQ3SY00 556 aa22.13■■□□□ 1.13
TRPM4-212ENST00000599459 APOA5Q6Q788 366 aa22.13■■□□□ 1.13
TRPM4-212ENST00000599459 DEFB128Q7Z7B8 93 aa22.13■■□□□ 1.13
TRPM4-212ENST00000599459 ALG1Q9BT22 464 aa22.13■■□□□ 1.13
TRPM4-212ENST00000599459 UNC80Q8N2C7 3258 aa22.12■■□□□ 1.13
TRPM4-212ENST00000599459 MFSD10Q14728 455 aa22.12■■□□□ 1.13
TRPM4-212ENST00000599459 GNPTABQ3T906 1256 aa22.12■■□□□ 1.13
TRPM4-212ENST00000599459 SYNE3Q6ZMZ3 975 aa22.12■■□□□ 1.13
TRPM4-212ENST00000599459 DHX32Q7L7V1 743 aaKnown RBP22.12■■□□□ 1.13
TRPM4-212ENST00000599459 MYLIPQ8WY64 445 aa22.12■■□□□ 1.13
TRPM4-212ENST00000599459 INPP4AQ96PE3 977 aaPredicted RBP22.12■■□□□ 1.13
TRPM4-212ENST00000599459 KATNAL1Q9BW62 490 aa22.12■■□□□ 1.13
TRPM4-212ENST00000599459 BCAS3Q9H6U6 928 aa22.12■■□□□ 1.13
TRPM4-212ENST00000599459 RTEL1Q9NZ71 1219 aa22.12■■□□□ 1.13
TRPM4-212ENST00000599459 HDAC6Q9UBN7 1215 aa22.12■■□□□ 1.13
TRPM4-212ENST00000599459 GTF2IRD1Q9UHL9 959 aa22.12■■□□□ 1.13
TRPM4-212ENST00000599459 A0A0C4DFX4 3053 aa22.12■■□□□ 1.13
TRPM4-212ENST00000599459 STAM2O75886 525 aa22.11■■□□□ 1.13
TRPM4-212ENST00000599459 PFKMP08237 780 aa22.11■■□□□ 1.13
TRPM4-212ENST00000599459 IQCF3P0C7M6 154 aa22.11■■□□□ 1.13
TRPM4-212ENST00000599459 SEMA3FQ13275 785 aa22.11■■□□□ 1.13
TRPM4-212ENST00000599459 BFSP2Q13515 415 aa22.11■■□□□ 1.13
TRPM4-212ENST00000599459 KIAA0753Q2KHM9 967 aa22.11■■□□□ 1.13
TRPM4-212ENST00000599459 C7orf31Q8N865 590 aa22.11■■□□□ 1.13
TRPM4-212ENST00000599459 RETREG2Q8NC44 543 aa22.11■■□□□ 1.13
TRPM4-212ENST00000599459 PSTPIP2Q9H939 334 aa22.11■■□□□ 1.13
TRPM4-212ENST00000599459 MLXIPQ9HAP2 919 aa22.11■■□□□ 1.13
TRPM4-212ENST00000599459 BRPF3Q9ULD4 1205 aa22.11■■□□□ 1.13
TRPM4-212ENST00000599459 ZBBXA8MT70 800 aa22.1■■□□□ 1.13
TRPM4-212ENST00000599459 HAS3O00219 553 aa22.1■■□□□ 1.13
TRPM4-212ENST00000599459 PPFIA4O75335 1185 aa22.1■■□□□ 1.13
TRPM4-212ENST00000599459 KRT32Q14532 448 aa22.1■■□□□ 1.13
TRPM4-212ENST00000599459 GRIN2CQ14957 1233 aa22.1■■□□□ 1.13
TRPM4-212ENST00000599459 PCNX4Q63HM2 1172 aa22.1■■□□□ 1.13
TRPM4-212ENST00000599459 HEATR3Q7Z4Q2 680 aa22.1■■□□□ 1.13
TRPM4-212ENST00000599459 DHX38Q92620 1227 aaKnown RBP22.1■■□□□ 1.13
TRPM4-212ENST00000599459 ZNF576Q9H609 170 aa22.1■■□□□ 1.13
TRPM4-212ENST00000599459 CNTNAP5Q8WYK1 1306 aa22.09■■□□□ 1.13
TRPM4-212ENST00000599459 SPATA31C2B4DYI2 1134 aa22.09■■□□□ 1.13
TRPM4-212ENST00000599459 ICAM3P32942 547 aa22.09■■□□□ 1.13
TRPM4-212ENST00000599459 RFC2P35250 354 aa22.09■■□□□ 1.13
TRPM4-212ENST00000599459 UBE2SQ16763 222 aa22.09■■□□□ 1.13
TRPM4-212ENST00000599459 CCDC155Q8N6L0 562 aa22.09■■□□□ 1.13
TRPM4-212ENST00000599459 SLC4A7Q9Y6M7 1214 aa22.09■■□□□ 1.13
TRPM4-212ENST00000599459 CHD9Q3L8U1 2897 aa22.09■■□□□ 1.13
TRPM4-212ENST00000599459 GBF1Q92538 1859 aa22.09■■□□□ 1.13
TRPM4-212ENST00000599459 TRIP12Q14669 1992 aaPredicted RBP22.08■■□□□ 1.13
TRPM4-212ENST00000599459 PRUNE2Q8WUY3 3088 aa22.08■■□□□ 1.13
TRPM4-212ENST00000599459 ZBTB43O43298 467 aa22.08■■□□□ 1.13
TRPM4-212ENST00000599459 FIBPO43427 364 aa22.08■■□□□ 1.13
TRPM4-212ENST00000599459 CPA1P15085 419 aa22.08■■□□□ 1.13
TRPM4-212ENST00000599459 FOSL2P15408 326 aa22.08■■□□□ 1.13
TRPM4-212ENST00000599459 RTN1Q16799 776 aa22.08■■□□□ 1.13
TRPM4-212ENST00000599459 CAGE1Q8TC20 777 aa22.08■■□□□ 1.13
TRPM4-212ENST00000599459 C16orf70Q9BSU1 422 aa22.08■■□□□ 1.13
TRPM4-212ENST00000599459 RBM28Q9NW13 759 aaKnown RBP22.08■■□□□ 1.13
TRPM4-212ENST00000599459 DOCK5Q9H7D0 1870 aa22.08■■□□□ 1.13
TRPM4-212ENST00000599459 KLF18A0A0U1RQI7 1052 aa22.07■■□□□ 1.12
TRPM4-212ENST00000599459 NOP56O00567 594 aaKnown RBP22.07■■□□□ 1.12
TRPM4-212ENST00000599459 RAB30Q15771 203 aa22.07■■□□□ 1.12
TRPM4-212ENST00000599459 WWC2Q6AWC2 1192 aa22.07■■□□□ 1.12
TRPM4-212ENST00000599459 XRRA1Q6P2D8 792 aa22.07■■□□□ 1.12
TRPM4-212ENST00000599459 METTL7BQ6UX53 244 aa22.07■■□□□ 1.12
TRPM4-212ENST00000599459 CYFIP1Q7L576 1253 aa22.07■■□□□ 1.12
TRPM4-212ENST00000599459 MAFAQ8NHW3 353 aaPredicted RBP22.07■■□□□ 1.12
TRPM4-212ENST00000599459 AFAP1L1Q8TED9 768 aa22.07■■□□□ 1.12
TRPM4-212ENST00000599459 MSRAQ9UJ68 235 aa22.07■■□□□ 1.12
TRPM4-212ENST00000599459 YBX2Q9Y2T7 364 aaKnown RBP22.07■■□□□ 1.12
TRPM4-212ENST00000599459 LGALS2P05162 132 aa22.06■■□□□ 1.12
TRPM4-212ENST00000599459 HMGB1P09429 215 aaKnown RBP22.06■■□□□ 1.12
TRPM4-212ENST00000599459 RABGGTBP53611 331 aa22.06■■□□□ 1.12
TRPM4-212ENST00000599459 ZNF200P98182 395 aaPredicted RBP22.06■■□□□ 1.12
TRPM4-212ENST00000599459 FUT2Q10981 343 aa22.06■■□□□ 1.12
TRPM4-212ENST00000599459 NEDD9Q14511 834 aa22.06■■□□□ 1.12
TRPM4-212ENST00000599459 HIC1Q14526 733 aa22.06■■□□□ 1.12
TRPM4-212ENST00000599459 KCNB2Q92953 911 aa22.06■■□□□ 1.12
TRPM4-212ENST00000599459 FTOQ9C0B1 505 aaKnown RBP eCLIP22.06■■□□□ 1.12
TRPM4-212ENST00000599459 NKX2-4Q9H2Z4 354 aa22.06■■□□□ 1.12
TRPM4-212ENST00000599459 TELO2Q9Y4R8 837 aa22.06■■□□□ 1.12
TRPM4-212ENST00000599459 GOLGA8AA7E2F4 631 aa22.05■■□□□ 1.12
TRPM4-212ENST00000599459 GOLGA8BA8MQT2 603 aa22.05■■□□□ 1.12
TRPM4-212ENST00000599459 ACTN1P12814 892 aa22.05■■□□□ 1.12
TRPM4-212ENST00000599459 SELPP16109 830 aa22.05■■□□□ 1.12
TRPM4-212ENST00000599459 ATP2A2P16615 1042 aaKnown RBP22.05■■□□□ 1.12
TRPM4-212ENST00000599459 HSPA4P34932 840 aa22.05■■□□□ 1.12
TRPM4-212ENST00000599459 RBL2Q08999 1139 aa22.05■■□□□ 1.12
TRPM4-212ENST00000599459 LRRC8DQ7L1W4 858 aa22.05■■□□□ 1.12
TRPM4-212ENST00000599459 NLRX1Q86UT6 975 aa22.05■■□□□ 1.12
TRPM4-212ENST00000599459 TET1Q8NFU7 2136 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms