RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 HERC6Q8IVU3 1022 aa14.06□□□□□ -0.16
SOX2-OT-228ENST00000597828 CAGE1Q8TC20 777 aa14.06□□□□□ -0.16
SOX2-OT-228ENST00000597828 AFAP1L1Q8TED9 768 aa14.06□□□□□ -0.16
SOX2-OT-228ENST00000597828 PIBF1Q8WXW3 757 aa14.06□□□□□ -0.16
SOX2-OT-228ENST00000597828 EMID1Q96A84 441 aaPredicted RBP14.06□□□□□ -0.16
SOX2-OT-228ENST00000597828 ASB2Q96Q27 587 aa14.06□□□□□ -0.16
SOX2-OT-228ENST00000597828 MAF1Q9H063 256 aa14.06□□□□□ -0.16
SOX2-OT-228ENST00000597828 SUPT16HQ9Y5B9 1047 aaKnown RBP14.06□□□□□ -0.16
SOX2-OT-228ENST00000597828 PCDHA1Q9Y5I3 950 aa14.06□□□□□ -0.16
SOX2-OT-228ENST00000597828 HAS3O00219 553 aa14.05□□□□□ -0.16
SOX2-OT-228ENST00000597828 IFIT3O14879 490 aaKnown RBP14.05□□□□□ -0.16
SOX2-OT-228ENST00000597828 NBNO60934 754 aa14.05□□□□□ -0.16
SOX2-OT-228ENST00000597828 GGPS1O95749 300 aa14.05□□□□□ -0.16
SOX2-OT-228ENST00000597828 CKBP12277 381 aa14.05□□□□□ -0.16
SOX2-OT-228ENST00000597828 SELPP16109 830 aa14.05□□□□□ -0.16
SOX2-OT-228ENST00000597828 UBA1P22314 1058 aaKnown RBP14.05□□□□□ -0.16
SOX2-OT-228ENST00000597828 CHMLP26374 656 aa14.05□□□□□ -0.16
SOX2-OT-228ENST00000597828 ANTXR2P58335 489 aa14.05□□□□□ -0.16
SOX2-OT-228ENST00000597828 WDR5P61964 334 aaKnown RBP14.05□□□□□ -0.16
SOX2-OT-228ENST00000597828 SP2Q02086 613 aa14.05□□□□□ -0.16
SOX2-OT-228ENST00000597828 TFF2Q03403 129 aa14.05□□□□□ -0.16
SOX2-OT-228ENST00000597828 HSDL1Q3SXM5 330 aa14.05□□□□□ -0.16
SOX2-OT-228ENST00000597828 FCHSD1Q86WN1 690 aa14.05□□□□□ -0.16
SOX2-OT-228ENST00000597828 DHX37Q8IY37 1157 aaKnown RBP14.05□□□□□ -0.16
SOX2-OT-228ENST00000597828 CCDC155Q8N6L0 562 aa14.05□□□□□ -0.16
SOX2-OT-228ENST00000597828 PPTC7Q8NI37 304 aa14.05□□□□□ -0.16
SOX2-OT-228ENST00000597828 ADAMTS19Q8TE59 1207 aa14.05□□□□□ -0.16
SOX2-OT-228ENST00000597828 ATXN2LQ8WWM7 1075 aaKnown RBP14.05□□□□□ -0.16
SOX2-OT-228ENST00000597828 ARNTL2Q8WYA1 636 aa14.05□□□□□ -0.16
SOX2-OT-228ENST00000597828 NECAB3Q96P71 396 aaPredicted RBP14.05□□□□□ -0.16
SOX2-OT-228ENST00000597828 BCAS3Q9H6U6 928 aa14.05□□□□□ -0.16
SOX2-OT-228ENST00000597828 E7EWF7 191 aa14.04□□□□□ -0.16
SOX2-OT-228ENST00000597828 TNFRSF10AO00220 468 aa14.04□□□□□ -0.16
SOX2-OT-228ENST00000597828 RBL2Q08999 1139 aa14.04□□□□□ -0.16
SOX2-OT-228ENST00000597828 TRDNQ13061 729 aa14.04□□□□□ -0.16
SOX2-OT-228ENST00000597828 COL9A3Q14050 684 aaPredicted RBP14.04□□□□□ -0.16
SOX2-OT-228ENST00000597828 MBTPS1Q14703 1052 aa14.04□□□□□ -0.16
SOX2-OT-228ENST00000597828 TRIM71Q2Q1W2 868 aaKnown RBP14.04□□□□□ -0.16
SOX2-OT-228ENST00000597828 MYSM1Q5VVJ2 828 aa14.04□□□□□ -0.16
SOX2-OT-228ENST00000597828 TRAF7Q6Q0C0 670 aa14.04□□□□□ -0.16
SOX2-OT-228ENST00000597828 C7orf31Q8N865 590 aa14.04□□□□□ -0.16
SOX2-OT-228ENST00000597828 RIOX1Q9H6W3 641 aa14.04□□□□□ -0.16
SOX2-OT-228ENST00000597828 MTCH2Q9Y6C9 303 aa14.04□□□□□ -0.16
SOX2-OT-228ENST00000597828 TLL1O43897 1013 aa14.03□□□□□ -0.16
SOX2-OT-228ENST00000597828 BAIAP3O94812 1187 aa14.03□□□□□ -0.16
SOX2-OT-228ENST00000597828 HOXD8P13378 290 aaPredicted RBP14.03□□□□□ -0.16
SOX2-OT-228ENST00000597828 KCNJ6P48051 423 aa14.03□□□□□ -0.16
SOX2-OT-228ENST00000597828 KCNQ1P51787 676 aa14.03□□□□□ -0.16
SOX2-OT-228ENST00000597828 MRPS5P82675 430 aaKnown RBP14.03□□□□□ -0.16
SOX2-OT-228ENST00000597828 TROAPQ12815 778 aa14.03□□□□□ -0.16
SOX2-OT-228ENST00000597828 LAMC2Q13753 1193 aa14.03□□□□□ -0.16
SOX2-OT-228ENST00000597828 WTAPQ15007 396 aa14.03□□□□□ -0.16
SOX2-OT-228ENST00000597828 CELF3Q5SZQ8 465 aaKnown RBP14.03□□□□□ -0.16
SOX2-OT-228ENST00000597828 ZNF618Q5T7W0 954 aa14.03□□□□□ -0.16
SOX2-OT-228ENST00000597828 RALYLQ86SE5 291 aaKnown RBP14.03□□□□□ -0.16
SOX2-OT-228ENST00000597828 VSIG10LQ86VR7 867 aa14.03□□□□□ -0.16
SOX2-OT-228ENST00000597828 PHOSPHO2Q8TCD6 241 aa14.03□□□□□ -0.16
SOX2-OT-228ENST00000597828 SPATA33Q96N06 139 aa14.03□□□□□ -0.16
SOX2-OT-228ENST00000597828 MYL10Q9BUA6 226 aa14.03□□□□□ -0.16
SOX2-OT-228ENST00000597828 KATNAL1Q9BW62 490 aa14.03□□□□□ -0.16
SOX2-OT-228ENST00000597828 TELO2Q9Y4R8 837 aa14.03□□□□□ -0.16
SOX2-OT-228ENST00000597828 MYO7AQ13402 2215 aa14.03□□□□□ -0.16
SOX2-OT-228ENST00000597828 PLXNA4Q9HCM2 1894 aa14.02□□□□□ -0.16
SOX2-OT-228ENST00000597828 FRMPD4Q14CM0 1322 aa14.02□□□□□ -0.17
SOX2-OT-228ENST00000597828 GCOM1H8Y6P7 765 aaPredicted RBP14.02□□□□□ -0.17
SOX2-OT-228ENST00000597828 SGSM2O43147 1006 aa14.02□□□□□ -0.17
SOX2-OT-228ENST00000597828 CXCL10P02778 98 aa14.02□□□□□ -0.17
SOX2-OT-228ENST00000597828 POLR2MP0CAP2 368 aa14.02□□□□□ -0.17
SOX2-OT-228ENST00000597828 CCND2P30279 289 aa14.02□□□□□ -0.17
SOX2-OT-228ENST00000597828 MRPS9P82933 396 aaKnown RBP14.02□□□□□ -0.17
SOX2-OT-228ENST00000597828 SEMA3FQ13275 785 aa14.02□□□□□ -0.17
SOX2-OT-228ENST00000597828 GRB10Q13322 594 aa14.02□□□□□ -0.17
SOX2-OT-228ENST00000597828 SKIV2LQ15477 1246 aaKnown RBP14.02□□□□□ -0.17
SOX2-OT-228ENST00000597828 CNKSR3Q6P9H4 555 aa14.02□□□□□ -0.17
SOX2-OT-228ENST00000597828 MB21D2Q8IYB1 491 aaPredicted RBP14.02□□□□□ -0.17
SOX2-OT-228ENST00000597828 NCOA7Q8NI08 942 aa14.02□□□□□ -0.17
SOX2-OT-228ENST00000597828 GDPD5Q8WTR4 605 aa14.02□□□□□ -0.17
SOX2-OT-228ENST00000597828 C16orf70Q9BSU1 422 aa14.02□□□□□ -0.17
SOX2-OT-228ENST00000597828 U3KPZ7 1027 aaPredicted RBP14.02□□□□□ -0.17
SOX2-OT-228ENST00000597828 PNMA6FA0A0J9YX94 578 aa14.01□□□□□ -0.17
SOX2-OT-228ENST00000597828 ERICH2A1L162 156 aa14.01□□□□□ -0.17
SOX2-OT-228ENST00000597828 LPXNO60711 386 aa14.01□□□□□ -0.17
SOX2-OT-228ENST00000597828 PTK7Q13308 1070 aa14.01□□□□□ -0.17
SOX2-OT-228ENST00000597828 FAM117BQ6P1L5 589 aa14.01□□□□□ -0.17
SOX2-OT-228ENST00000597828 RUFY2Q8WXA3 655 aa14.01□□□□□ -0.17
SOX2-OT-228ENST00000597828 UHRF1Q96T88 793 aaPredicted RBP14.01□□□□□ -0.17
SOX2-OT-228ENST00000597828 OSBPL7Q9BZF2 842 aa14.01□□□□□ -0.17
SOX2-OT-228ENST00000597828 MAP3K20Q9NYL2 800 aaKnown RBP14.01□□□□□ -0.17
SOX2-OT-228ENST00000597828 MTUS1Q9ULD2 1270 aa14.01□□□□□ -0.17
SOX2-OT-228ENST00000597828 RBM8AQ9Y5S9 174 aaKnown RBP14.01□□□□□ -0.17
SOX2-OT-228ENST00000597828 FNDC1Q4ZHG4 1894 aaPredicted RBP14.01□□□□□ -0.17
SOX2-OT-228ENST00000597828 TTC3P53804 2025 aa14□□□□□ -0.17
SOX2-OT-228ENST00000597828 KIF28PB7ZC32 967 aa14□□□□□ -0.17
SOX2-OT-228ENST00000597828 GTPBP6O43824 516 aaPredicted RBP14□□□□□ -0.17
SOX2-OT-228ENST00000597828 LGALS2P05162 132 aa14□□□□□ -0.17
SOX2-OT-228ENST00000597828 POU3F3P20264 500 aaPredicted RBP14□□□□□ -0.17
SOX2-OT-228ENST00000597828 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14□□□□□ -0.17
SOX2-OT-228ENST00000597828 TRIM50Q86XT4 487 aa14□□□□□ -0.17
SOX2-OT-228ENST00000597828 RAB11FIP4Q86YS3 637 aa14□□□□□ -0.17
SOX2-OT-228ENST00000597828 IGDCC4Q8TDY8 1250 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms