RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 PDE4AP27815 886 aa18.49■□□□□ 0.55
LINC02560-201ENST00000596379 ZNF200P98182 395 aaPredicted RBP18.49■□□□□ 0.55
LINC02560-201ENST00000596379 TRDNQ13061 729 aa18.49■□□□□ 0.55
LINC02560-201ENST00000596379 PTK7Q13308 1070 aa18.49■□□□□ 0.55
LINC02560-201ENST00000596379 PGM5Q15124 567 aa18.49■□□□□ 0.55
LINC02560-201ENST00000596379 SLC35G1Q2M3R5 365 aa18.49■□□□□ 0.55
LINC02560-201ENST00000596379 TCTN1Q2MV58 587 aa18.49■□□□□ 0.55
LINC02560-201ENST00000596379 CELF3Q5SZQ8 465 aaKnown RBP18.49■□□□□ 0.55
LINC02560-201ENST00000596379 CNKSR3Q6P9H4 555 aa18.49■□□□□ 0.55
LINC02560-201ENST00000596379 KCNV1Q6PIU1 500 aa18.49■□□□□ 0.55
LINC02560-201ENST00000596379 SPRED2Q7Z698 418 aa18.49■□□□□ 0.55
LINC02560-201ENST00000596379 HOMER1Q86YM7 354 aa18.49■□□□□ 0.55
LINC02560-201ENST00000596379 SAMD3Q8N6K7 520 aa18.49■□□□□ 0.55
LINC02560-201ENST00000596379 ZFP91Q96JP5 570 aaPredicted RBP18.49■□□□□ 0.55
LINC02560-201ENST00000596379 PIGSQ96S52 555 aa18.49■□□□□ 0.55
LINC02560-201ENST00000596379 MUC3AQ02505 3323 aa18.48■□□□□ 0.55
LINC02560-201ENST00000596379 LCHNA4D1U4 455 aa18.48■□□□□ 0.55
LINC02560-201ENST00000596379 GSPT1P15170 499 aaKnown RBP18.48■□□□□ 0.55
LINC02560-201ENST00000596379 DEFB103AP81534 67 aa18.48■□□□□ 0.55
LINC02560-201ENST00000596379 SP2Q02086 613 aa18.48■□□□□ 0.55
LINC02560-201ENST00000596379 GRM4Q14833 912 aa18.48■□□□□ 0.55
LINC02560-201ENST00000596379 HSDL1Q3SXM5 330 aa18.48■□□□□ 0.55
LINC02560-201ENST00000596379 IL31RAQ8NI17 732 aa18.48■□□□□ 0.55
LINC02560-201ENST00000596379 WNT8BQ93098 351 aa18.48■□□□□ 0.55
LINC02560-201ENST00000596379 SPATA33Q96N06 139 aa18.48■□□□□ 0.55
LINC02560-201ENST00000596379 NECAB3Q96P71 396 aaPredicted RBP18.48■□□□□ 0.55
LINC02560-201ENST00000596379 ZBED2Q9BTP6 218 aa18.48■□□□□ 0.55
LINC02560-201ENST00000596379 RIOX1Q9H6W3 641 aa18.48■□□□□ 0.55
LINC02560-201ENST00000596379 SENP2Q9HC62 589 aa18.48■□□□□ 0.55
LINC02560-201ENST00000596379 GCOM1H8Y6P7 765 aaPredicted RBP18.47■□□□□ 0.55
LINC02560-201ENST00000596379 IFIT3O14879 490 aaKnown RBP18.47■□□□□ 0.55
LINC02560-201ENST00000596379 GGPS1O95749 300 aa18.47■□□□□ 0.55
LINC02560-201ENST00000596379 CYP21A2P08686 494 aa18.47■□□□□ 0.55
LINC02560-201ENST00000596379 POLR2MP0CAP2 368 aa18.47■□□□□ 0.55
LINC02560-201ENST00000596379 HOXD8P13378 290 aaPredicted RBP18.47■□□□□ 0.55
LINC02560-201ENST00000596379 PTH1RQ03431 593 aa18.47■□□□□ 0.55
LINC02560-201ENST00000596379 GRB10Q13322 594 aa18.47■□□□□ 0.55
LINC02560-201ENST00000596379 HIC1Q14526 733 aa18.47■□□□□ 0.55
LINC02560-201ENST00000596379 AAK1Q2M2I8 961 aa18.47■□□□□ 0.55
LINC02560-201ENST00000596379 TRIM71Q2Q1W2 868 aaKnown RBP18.47■□□□□ 0.55
LINC02560-201ENST00000596379 ZNF618Q5T7W0 954 aa18.47■□□□□ 0.55
LINC02560-201ENST00000596379 TTC22Q5TAA0 569 aa18.47■□□□□ 0.55
LINC02560-201ENST00000596379 FCHSD1Q86WN1 690 aa18.47■□□□□ 0.55
LINC02560-201ENST00000596379 GPKOWQ92917 476 aaPredicted RBP eCLIP18.47■□□□□ 0.55
LINC02560-201ENST00000596379 U3KPZ7 1027 aaPredicted RBP18.47■□□□□ 0.55
LINC02560-201ENST00000596379 ABHD14A-ACY1A0A1B0GW23 586 aa18.46■□□□□ 0.55
LINC02560-201ENST00000596379 TGFB3P10600 412 aa18.46■□□□□ 0.55
LINC02560-201ENST00000596379 UBA1P22314 1058 aaKnown RBP18.46■□□□□ 0.55
LINC02560-201ENST00000596379 CCND2P30279 289 aa18.46■□□□□ 0.55
LINC02560-201ENST00000596379 KCNQ1P51787 676 aa18.46■□□□□ 0.55
LINC02560-201ENST00000596379 TRAF1Q13077 416 aa18.46■□□□□ 0.55
LINC02560-201ENST00000596379 TRAF7Q6Q0C0 670 aa18.46■□□□□ 0.55
LINC02560-201ENST00000596379 MLXIPQ9HAP2 919 aa18.46■□□□□ 0.55
LINC02560-201ENST00000596379 PNMA6FA0A0J9YX94 578 aa18.45■□□□□ 0.54
LINC02560-201ENST00000596379 ERICH2A1L162 156 aa18.45■□□□□ 0.54
LINC02560-201ENST00000596379 CYTH3O43739 400 aa18.45■□□□□ 0.54
LINC02560-201ENST00000596379 LPXNO60711 386 aa18.45■□□□□ 0.54
LINC02560-201ENST00000596379 COL9A1P20849 921 aa18.45■□□□□ 0.54
LINC02560-201ENST00000596379 IKBKEQ14164 716 aa18.45■□□□□ 0.54
LINC02560-201ENST00000596379 MBTPS1Q14703 1052 aa18.45■□□□□ 0.54
LINC02560-201ENST00000596379 RUFY2Q8WXA3 655 aa18.45■□□□□ 0.54
LINC02560-201ENST00000596379 C16orf70Q9BSU1 422 aa18.45■□□□□ 0.54
LINC02560-201ENST00000596379 BCAS3Q9H6U6 928 aa18.45■□□□□ 0.54
LINC02560-201ENST00000596379 REV3LO60673 3130 aa18.45■□□□□ 0.54
LINC02560-201ENST00000596379 TRANK1O15050 2925 aa18.44■□□□□ 0.54
LINC02560-201ENST00000596379 GJB5O95377 273 aa18.44■□□□□ 0.54
LINC02560-201ENST00000596379 CHMLP26374 656 aa18.44■□□□□ 0.54
LINC02560-201ENST00000596379 TROAPQ12815 778 aa18.44■□□□□ 0.54
LINC02560-201ENST00000596379 WTAPQ15007 396 aa18.44■□□□□ 0.54
LINC02560-201ENST00000596379 FAM117BQ6P1L5 589 aa18.44■□□□□ 0.54
LINC02560-201ENST00000596379 NCOA7Q8NI08 942 aa18.44■□□□□ 0.54
LINC02560-201ENST00000596379 RAD9AQ99638 391 aa18.44■□□□□ 0.54
LINC02560-201ENST00000596379 COG5Q9UP83 839 aa18.44■□□□□ 0.54
LINC02560-201ENST00000596379 TAF6LQ9Y6J9 622 aa18.44■□□□□ 0.54
LINC02560-201ENST00000596379 E7EWF7 191 aa18.43■□□□□ 0.54
LINC02560-201ENST00000596379 EFCAB14O75071 495 aa18.43■□□□□ 0.54
LINC02560-201ENST00000596379 LGR5O75473 907 aa18.43■□□□□ 0.54
LINC02560-201ENST00000596379 THPOP40225 353 aa18.43■□□□□ 0.54
LINC02560-201ENST00000596379 RALYLQ86SE5 291 aaKnown RBP18.43■□□□□ 0.54
LINC02560-201ENST00000596379 PIBF1Q8WXW3 757 aa18.43■□□□□ 0.54
LINC02560-201ENST00000596379 MTUS1Q9ULD2 1270 aa18.43■□□□□ 0.54
LINC02560-201ENST00000596379 C17orf102A2RUQ5 167 aa18.42■□□□□ 0.54
LINC02560-201ENST00000596379 RSPH10B2B2RC85 870 aa18.42■□□□□ 0.54
LINC02560-201ENST00000596379 H3BRB1 525 aa18.42■□□□□ 0.54
LINC02560-201ENST00000596379 RSPH10BP0C881 870 aa18.42■□□□□ 0.54
LINC02560-201ENST00000596379 MRPS9P82933 396 aaKnown RBP18.42■□□□□ 0.54
LINC02560-201ENST00000596379 SART3Q15020 963 aaKnown RBP18.42■□□□□ 0.54
LINC02560-201ENST00000596379 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.42■□□□□ 0.54
LINC02560-201ENST00000596379 CATIPQ7Z7H3 387 aa18.42■□□□□ 0.54
LINC02560-201ENST00000596379 SERINC5Q86VE9 423 aa18.42■□□□□ 0.54
LINC02560-201ENST00000596379 DBF4BQ8NFT6 615 aa18.42■□□□□ 0.54
LINC02560-201ENST00000596379 GDPD5Q8WTR4 605 aa18.42■□□□□ 0.54
LINC02560-201ENST00000596379 ATP6V0A1Q93050 837 aa18.42■□□□□ 0.54
LINC02560-201ENST00000596379 HLA-CQ95604 372 aa18.42■□□□□ 0.54
LINC02560-201ENST00000596379 TUT1Q9H6E5 874 aaKnown RBP18.42■□□□□ 0.54
LINC02560-201ENST00000596379 SUGCTQ9HAC7 445 aa18.42■□□□□ 0.54
LINC02560-201ENST00000596379 RTEL1Q9NZ71 1219 aa18.42■□□□□ 0.54
LINC02560-201ENST00000596379 DOCK5Q9H7D0 1870 aa18.41■□□□□ 0.54
LINC02560-201ENST00000596379 BDP1A6H8Y1 2624 aa18.41■□□□□ 0.54
LINC02560-201ENST00000596379 COL4A4P53420 1690 aaPredicted RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms