RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 JADE2Q9NQC1 790 aa22.01■■□□□ 1.11
PNKP-207ENST00000596014 MKI67P46013 3256 aaKnown RBP22■■□□□ 1.11
PNKP-207ENST00000596014 FIBPO43427 364 aa22■■□□□ 1.11
PNKP-207ENST00000596014 EDIL3O43854 480 aa22■■□□□ 1.11
PNKP-207ENST00000596014 USP11P51784 963 aa22■■□□□ 1.11
PNKP-207ENST00000596014 SP2Q02086 613 aa22■■□□□ 1.11
PNKP-207ENST00000596014 EARS2Q5JPH6 523 aaKnown RBP22■■□□□ 1.11
PNKP-207ENST00000596014 PIK3AP1Q6ZUJ8 805 aa22■■□□□ 1.11
PNKP-207ENST00000596014 TLK2Q86UE8 772 aa22■■□□□ 1.11
PNKP-207ENST00000596014 GPRASP2Q96D09 838 aa22■■□□□ 1.11
PNKP-207ENST00000596014 UPF3AQ9H1J1 476 aaKnown RBP22■■□□□ 1.11
PNKP-207ENST00000596014 FOXD4L1Q9NU39 408 aa22■■□□□ 1.11
PNKP-207ENST00000596014 FAM86B1E9PN63 330 aa21.99■■□□□ 1.11
PNKP-207ENST00000596014 MEIS1O00470 390 aa21.99■■□□□ 1.11
PNKP-207ENST00000596014 MYCNP04198 464 aaPredicted RBP21.99■■□□□ 1.11
PNKP-207ENST00000596014 FAM86B2P0C5J1 330 aa21.99■■□□□ 1.11
PNKP-207ENST00000596014 IRX5P78411 483 aaPredicted RBP21.99■■□□□ 1.11
PNKP-207ENST00000596014 LRRC41Q15345 812 aa21.99■■□□□ 1.11
PNKP-207ENST00000596014 INF2Q27J81 1249 aa21.99■■□□□ 1.11
PNKP-207ENST00000596014 ANKLE1Q8NAG6 615 aa21.99■■□□□ 1.11
PNKP-207ENST00000596014 AP5M1Q9H0R1 490 aa21.99■■□□□ 1.11
PNKP-207ENST00000596014 SPC25Q9HBM1 224 aa21.99■■□□□ 1.11
PNKP-207ENST00000596014 MAFGO15525 162 aa21.98■■□□□ 1.11
PNKP-207ENST00000596014 C6orf222P0C671 652 aaPredicted RBP21.98■■□□□ 1.11
PNKP-207ENST00000596014 CIITAP33076 1130 aa21.98■■□□□ 1.11
PNKP-207ENST00000596014 NKX3-2P78367 333 aa21.98■■□□□ 1.11
PNKP-207ENST00000596014 MTMR1Q13613 665 aa21.98■■□□□ 1.11
PNKP-207ENST00000596014 LARP1BQ659C4 914 aaKnown RBP21.98■■□□□ 1.11
PNKP-207ENST00000596014 RNF180Q86T96 592 aa21.98■■□□□ 1.11
PNKP-207ENST00000596014 KLHDC9Q8NEP7 349 aa21.98■■□□□ 1.11
PNKP-207ENST00000596014 CDHR1Q96JP9 859 aa21.98■■□□□ 1.11
PNKP-207ENST00000596014 DOCK5Q9H7D0 1870 aa21.98■■□□□ 1.11
PNKP-207ENST00000596014 MYADML2A6NDP7 307 aa21.98■■□□□ 1.11
PNKP-207ENST00000596014 CTAGE5O15320 804 aa21.98■■□□□ 1.11
PNKP-207ENST00000596014 MNX1P50219 401 aaPredicted RBP21.98■■□□□ 1.11
PNKP-207ENST00000596014 BECN1Q14457 450 aa21.98■■□□□ 1.11
PNKP-207ENST00000596014 OR6J1Q8NGC5 347 aa21.98■■□□□ 1.11
PNKP-207ENST00000596014 FOXP1Q9H334 677 aaPredicted RBP21.98■■□□□ 1.11
PNKP-207ENST00000596014 KCNH7Q9NS40 1196 aa21.98■■□□□ 1.11
PNKP-207ENST00000596014 IGLV3-22A0A075B6J6 115 aa21.97■■□□□ 1.11
PNKP-207ENST00000596014 FAM205CA6NFA0 338 aa21.97■■□□□ 1.11
PNKP-207ENST00000596014 GH1P01241 217 aa21.97■■□□□ 1.11
PNKP-207ENST00000596014 ARP10275 920 aa21.97■■□□□ 1.11
PNKP-207ENST00000596014 UBA1P22314 1058 aaKnown RBP21.97■■□□□ 1.11
PNKP-207ENST00000596014 ARHGAP1Q07960 439 aa21.97■■□□□ 1.11
PNKP-207ENST00000596014 NIPA1Q7RTP0 329 aa21.97■■□□□ 1.11
PNKP-207ENST00000596014 SENP7Q9BQF6 1050 aa21.97■■□□□ 1.11
PNKP-207ENST00000596014 DNAH12Q6ZR08 3092 aa21.96■■□□□ 1.11
PNKP-207ENST00000596014 H3BQV1 296 aa21.96■■□□□ 1.11
PNKP-207ENST00000596014 DNM1LO00429 736 aa21.96■■□□□ 1.11
PNKP-207ENST00000596014 ATP9AO75110 1047 aa21.96■■□□□ 1.11
PNKP-207ENST00000596014 CAPN15O75808 1086 aa21.96■■□□□ 1.11
PNKP-207ENST00000596014 GNASQ5JWF2 1037 aa21.96■■□□□ 1.11
PNKP-207ENST00000596014 IFFO2Q5TF58 517 aa21.96■■□□□ 1.11
PNKP-207ENST00000596014 MYSM1Q5VVJ2 828 aa21.96■■□□□ 1.11
PNKP-207ENST00000596014 PLA2G4DQ86XP0 818 aa21.96■■□□□ 1.11
PNKP-207ENST00000596014 BCAS3Q9H6U6 928 aa21.96■■□□□ 1.11
PNKP-207ENST00000596014 GGPS1O95749 300 aa21.95■■□□□ 1.1
PNKP-207ENST00000596014 HSP90AA1P07900 732 aaKnown RBP21.95■■□□□ 1.1
PNKP-207ENST00000596014 CST5P28325 142 aaPredicted RBP21.95■■□□□ 1.1
PNKP-207ENST00000596014 BEX3Q00994 111 aa21.95■■□□□ 1.1
PNKP-207ENST00000596014 LAMC2Q13753 1193 aa21.95■■□□□ 1.1
PNKP-207ENST00000596014 NEDD9Q14511 834 aa21.95■■□□□ 1.1
PNKP-207ENST00000596014 FSCN1Q16658 493 aaKnown RBP21.95■■□□□ 1.1
PNKP-207ENST00000596014 PRR16Q569H4 304 aa21.95■■□□□ 1.1
PNKP-207ENST00000596014 CELF3Q5SZQ8 465 aaKnown RBP21.95■■□□□ 1.1
PNKP-207ENST00000596014 CCSAPQ6IQ19 270 aaPredicted RBP21.95■■□□□ 1.1
PNKP-207ENST00000596014 NEK8Q86SG6 692 aa21.95■■□□□ 1.1
PNKP-207ENST00000596014 DHX37Q8IY37 1157 aaKnown RBP21.95■■□□□ 1.1
PNKP-207ENST00000596014 EMID1Q96A84 441 aaPredicted RBP21.95■■□□□ 1.1
PNKP-207ENST00000596014 CYP3A7-CYP3A51PA0A087WV96 503 aa21.95■■□□□ 1.1
PNKP-207ENST00000596014 KBTBD13C9JR72 458 aa21.95■■□□□ 1.1
PNKP-207ENST00000596014 KCNA2P16389 499 aa21.95■■□□□ 1.1
PNKP-207ENST00000596014 PDCP20941 246 aa21.95■■□□□ 1.1
PNKP-207ENST00000596014 CYP3A7P24462 503 aa21.95■■□□□ 1.1
PNKP-207ENST00000596014 LETM2Q2VYF4 491 aa21.95■■□□□ 1.1
PNKP-207ENST00000596014 DIS3LQ8TF46 1054 aaKnown RBP21.95■■□□□ 1.1
PNKP-207ENST00000596014 AGO4Q9HCK5 861 aaKnown RBP21.95■■□□□ 1.1
PNKP-207ENST00000596014 A6NJR5 290 aa21.94■■□□□ 1.1
PNKP-207ENST00000596014 KIF28PB7ZC32 967 aa21.94■■□□□ 1.1
PNKP-207ENST00000596014 SORBS3O60504 671 aa21.94■■□□□ 1.1
PNKP-207ENST00000596014 FARP2O94887 1054 aaPredicted RBP21.94■■□□□ 1.1
PNKP-207ENST00000596014 TDP2O95551 362 aa21.94■■□□□ 1.1
PNKP-207ENST00000596014 U2AF2P26368 475 aaKnown RBP eCLIP21.94■■□□□ 1.14e-8■□□□□ 9.6
PNKP-207ENST00000596014 GNL2Q13823 731 aaKnown RBP21.94■■□□□ 1.1
PNKP-207ENST00000596014 KCNA10Q16322 511 aa21.94■■□□□ 1.1
PNKP-207ENST00000596014 MOXD1Q6UVY6 613 aa21.94■■□□□ 1.1
PNKP-207ENST00000596014 UBE2Q1Q7Z7E8 422 aa21.94■■□□□ 1.1
PNKP-207ENST00000596014 GIMAP8Q8ND71 665 aaPredicted RBP21.94■■□□□ 1.1
PNKP-207ENST00000596014 LENG9Q96B70 501 aa21.94■■□□□ 1.1
PNKP-207ENST00000596014 PAWRQ96IZ0 340 aaKnown RBP21.94■■□□□ 1.1
PNKP-207ENST00000596014 TSEN34Q9BSV6 310 aaKnown RBP21.94■■□□□ 1.1
PNKP-207ENST00000596014 MLXIPQ9HAP2 919 aa21.94■■□□□ 1.1
PNKP-207ENST00000596014 PKD2L1Q9P0L9 805 aa21.94■■□□□ 1.1
PNKP-207ENST00000596014 CPT1AP50416 773 aa21.93■■□□□ 1.1
PNKP-207ENST00000596014 SETQ01105 290 aaPredicted RBP21.93■■□□□ 1.1
PNKP-207ENST00000596014 CYFIP1Q7L576 1253 aa21.93■■□□□ 1.1
PNKP-207ENST00000596014 NOSTRINQ8IVI9 506 aa21.93■■□□□ 1.1
PNKP-207ENST00000596014 PCSK9Q8NBP7 692 aaKnown RBP21.93■■□□□ 1.1
PNKP-207ENST00000596014 AFG1LQ8WV93 481 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms