RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 MYSM1Q5VVJ2 828 aa20.69■□□□□ 0.9
HOMER3-208ENST00000595756 SLC9A7Q96T83 725 aa20.69■□□□□ 0.9
HOMER3-208ENST00000595756 COL25A1Q9BXS0 654 aaPredicted RBP20.69■□□□□ 0.9
HOMER3-208ENST00000595756 SLC28A3Q9HAS3 691 aa20.69■□□□□ 0.9
HOMER3-208ENST00000595756 MYO9BQ13459 2157 aa20.68■□□□□ 0.9
HOMER3-208ENST00000595756 HAS3O00219 553 aa20.68■□□□□ 0.9
HOMER3-208ENST00000595756 PRC1O43663 620 aa20.68■□□□□ 0.9
HOMER3-208ENST00000595756 STAM2O75886 525 aa20.68■□□□□ 0.9
HOMER3-208ENST00000595756 GGPS1O95749 300 aa20.68■□□□□ 0.9
HOMER3-208ENST00000595756 ZNF286BP0CG31 522 aa20.68■□□□□ 0.9
HOMER3-208ENST00000595756 SMARCA1P28370 1054 aa20.68■□□□□ 0.9
HOMER3-208ENST00000595756 MCM5P33992 734 aa20.68■□□□□ 0.9
HOMER3-208ENST00000595756 MFSD10Q14728 455 aa20.68■□□□□ 0.9
HOMER3-208ENST00000595756 CELF3Q5SZQ8 465 aaKnown RBP20.68■□□□□ 0.9
HOMER3-208ENST00000595756 C7orf31Q8N865 590 aa20.68■□□□□ 0.9
HOMER3-208ENST00000595756 TMEM87BQ96K49 555 aa20.68■□□□□ 0.9
HOMER3-208ENST00000595756 PRDM12Q9H4Q4 367 aa20.68■□□□□ 0.9
HOMER3-208ENST00000595756 ANO2Q9NQ90 1003 aa20.68■□□□□ 0.9
HOMER3-208ENST00000595756 DOCK5Q9H7D0 1870 aa20.67■□□□□ 0.9
HOMER3-208ENST00000595756 SH2B2O14492 632 aaPredicted RBP20.67■□□□□ 0.9
HOMER3-208ENST00000595756 BAIAP3O94812 1187 aa20.67■□□□□ 0.9
HOMER3-208ENST00000595756 PARNO95453 639 aaKnown RBP20.67■□□□□ 0.9
HOMER3-208ENST00000595756 GNPTABQ3T906 1256 aa20.67■□□□□ 0.9
HOMER3-208ENST00000595756 PPP2R2DQ66LE6 453 aa20.67■□□□□ 0.9
HOMER3-208ENST00000595756 FCHSD1Q86WN1 690 aa20.67■□□□□ 0.9
HOMER3-208ENST00000595756 DHX38Q92620 1227 aaKnown RBP20.67■□□□□ 0.9
HOMER3-208ENST00000595756 RRP36Q96EU6 259 aaKnown RBP20.67■□□□□ 0.9
HOMER3-208ENST00000595756 LZTS2Q9BRK4 669 aa20.67■□□□□ 0.9
HOMER3-208ENST00000595756 HDAC6Q9UBN7 1215 aa20.67■□□□□ 0.9
HOMER3-208ENST00000595756 XIRP2A4UGR9 3374 aa20.66■□□□□ 0.9
HOMER3-208ENST00000595756 SLC27A2O14975 620 aa20.66■□□□□ 0.9
HOMER3-208ENST00000595756 PPFIA4O75335 1185 aa20.66■□□□□ 0.9
HOMER3-208ENST00000595756 REC8O95072 547 aa20.66■□□□□ 0.9
HOMER3-208ENST00000595756 SELPP16109 830 aa20.66■□□□□ 0.9
HOMER3-208ENST00000595756 GNAQP50148 359 aa20.66■□□□□ 0.9
HOMER3-208ENST00000595756 RABGGTBP53611 331 aa20.66■□□□□ 0.9
HOMER3-208ENST00000595756 KIAA0753Q2KHM9 967 aa20.66■□□□□ 0.9
HOMER3-208ENST00000595756 HSDL1Q3SXM5 330 aa20.66■□□□□ 0.9
HOMER3-208ENST00000595756 TMTC2Q8N394 836 aa20.66■□□□□ 0.9
HOMER3-208ENST00000595756 USP38Q8NB14 1042 aa20.66■□□□□ 0.9
HOMER3-208ENST00000595756 PHOSPHO2Q8TCD6 241 aa20.66■□□□□ 0.9
HOMER3-208ENST00000595756 SPATA33Q96N06 139 aa20.66■□□□□ 0.9
HOMER3-208ENST00000595756 INPP4AQ96PE3 977 aaPredicted RBP20.66■□□□□ 0.9
HOMER3-208ENST00000595756 MYL10Q9BUA6 226 aa20.66■□□□□ 0.9
HOMER3-208ENST00000595756 SEC63Q9UGP8 760 aaKnown RBP20.66■□□□□ 0.9
HOMER3-208ENST00000595756 CCDC69A6NI79 296 aa20.65■□□□□ 0.9
HOMER3-208ENST00000595756 PIK3CDO00329 1044 aa20.65■□□□□ 0.9
HOMER3-208ENST00000595756 EPB41L2O43491 1005 aaKnown RBP20.65■□□□□ 0.9
HOMER3-208ENST00000595756 CALM1P0DP23 149 aa20.65■□□□□ 0.9
HOMER3-208ENST00000595756 CALM2P0DP24 149 aa20.65■□□□□ 0.9
HOMER3-208ENST00000595756 CALM3P0DP25 149 aa20.65■□□□□ 0.9
HOMER3-208ENST00000595756 ICAM3P32942 547 aa20.65■□□□□ 0.9
HOMER3-208ENST00000595756 LIFRP42702 1097 aa20.65■□□□□ 0.9
HOMER3-208ENST00000595756 SP2Q02086 613 aa20.65■□□□□ 0.9
HOMER3-208ENST00000595756 RNF20Q5VTR2 975 aa20.65■□□□□ 0.9
HOMER3-208ENST00000595756 LRRC8DQ7L1W4 858 aa20.65■□□□□ 0.9
HOMER3-208ENST00000595756 ALG1Q9BT22 464 aa20.65■□□□□ 0.9
HOMER3-208ENST00000595756 FTOQ9C0B1 505 aaKnown RBP eCLIP20.65■□□□□ 0.9
HOMER3-208ENST00000595756 MRPS9P82933 396 aaKnown RBP20.64■□□□□ 0.89
HOMER3-208ENST00000595756 PTK7Q13308 1070 aa20.64■□□□□ 0.89
HOMER3-208ENST00000595756 NECTIN1Q15223 517 aa20.64■□□□□ 0.89
HOMER3-208ENST00000595756 CREB3L3Q68CJ9 461 aa20.64■□□□□ 0.89
HOMER3-208ENST00000595756 NFXL1Q6ZNB6 911 aa20.64■□□□□ 0.89
HOMER3-208ENST00000595756 PIBF1Q8WXW3 757 aa20.64■□□□□ 0.89
HOMER3-208ENST00000595756 GPKOWQ92917 476 aaPredicted RBP eCLIP20.64■□□□□ 0.89
HOMER3-208ENST00000595756 PLEKHA8P1O95397 391 aa20.63■□□□□ 0.89
HOMER3-208ENST00000595756 CXCL10P02778 98 aa20.63■□□□□ 0.89
HOMER3-208ENST00000595756 CKBP12277 381 aa20.63■□□□□ 0.89
HOMER3-208ENST00000595756 MYOGP15173 224 aa20.63■□□□□ 0.89
HOMER3-208ENST00000595756 ADGRE1Q14246 886 aa20.63■□□□□ 0.89
HOMER3-208ENST00000595756 XRRA1Q6P2D8 792 aa20.63■□□□□ 0.89
HOMER3-208ENST00000595756 CUL5Q93034 780 aa20.63■□□□□ 0.89
HOMER3-208ENST00000595756 C16orf70Q9BSU1 422 aa20.63■□□□□ 0.89
HOMER3-208ENST00000595756 MLXIPQ9HAP2 919 aa20.63■□□□□ 0.89
HOMER3-208ENST00000595756 COL4A4P53420 1690 aaPredicted RBP20.62■□□□□ 0.89
HOMER3-208ENST00000595756 FIBPO43427 364 aa20.62■□□□□ 0.89
HOMER3-208ENST00000595756 CA3P07451 260 aa20.62■□□□□ 0.89
HOMER3-208ENST00000595756 NEDD9Q14511 834 aa20.62■□□□□ 0.89
HOMER3-208ENST00000595756 GPNMBQ14956 572 aa20.62■□□□□ 0.89
HOMER3-208ENST00000595756 TRIM71Q2Q1W2 868 aaKnown RBP20.62■□□□□ 0.89
HOMER3-208ENST00000595756 PCNX4Q63HM2 1172 aa20.62■□□□□ 0.89
HOMER3-208ENST00000595756 CNKSR3Q6P9H4 555 aa20.62■□□□□ 0.89
HOMER3-208ENST00000595756 METTL7BQ6UX53 244 aa20.62■□□□□ 0.89
HOMER3-208ENST00000595756 HERC6Q8IVU3 1022 aa20.62■□□□□ 0.89
HOMER3-208ENST00000595756 SRBD1Q8N5C6 995 aaKnown RBP20.62■□□□□ 0.89
HOMER3-208ENST00000595756 SMARCC2Q8TAQ2 1214 aa20.62■□□□□ 0.89
HOMER3-208ENST00000595756 TTC28Q96AY4 2481 aa20.62■□□□□ 0.89
HOMER3-208ENST00000595756 MEIS2O14770 477 aa20.61■□□□□ 0.89
HOMER3-208ENST00000595756 SORBS3O60504 671 aa20.61■□□□□ 0.89
HOMER3-208ENST00000595756 LGALS2P05162 132 aa20.61■□□□□ 0.89
HOMER3-208ENST00000595756 HOXC8P31273 242 aa20.61■□□□□ 0.89
HOMER3-208ENST00000595756 KCNJ6P48051 423 aa20.61■□□□□ 0.89
HOMER3-208ENST00000595756 SEMA3FQ13275 785 aa20.61■□□□□ 0.89
HOMER3-208ENST00000595756 COL9A3Q14050 684 aaPredicted RBP20.61■□□□□ 0.89
HOMER3-208ENST00000595756 SGMS1Q86VZ5 419 aa20.61■□□□□ 0.89
HOMER3-208ENST00000595756 ZFP91Q96JP5 570 aaPredicted RBP20.61■□□□□ 0.89
HOMER3-208ENST00000595756 SLC12A7Q9Y666 1083 aa20.61■□□□□ 0.89
HOMER3-208ENST00000595756 MICAL3Q7RTP6 2002 aa20.61■□□□□ 0.89
HOMER3-208ENST00000595756 SPATA31C2B4DYI2 1134 aa20.6■□□□□ 0.89
HOMER3-208ENST00000595756 NOP56O00567 594 aaKnown RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms