RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 CREB3L3Q68CJ9 461 aa19.69■□□□□ 0.74
CCDC9-202ENST00000595659 RRP36Q96EU6 259 aaKnown RBP19.69■□□□□ 0.74
CCDC9-202ENST00000595659 MLXIPQ9HAP2 919 aa19.69■□□□□ 0.74
CCDC9-202ENST00000595659 GTF2IRD1Q9UHL9 959 aa19.69■□□□□ 0.74
CCDC9-202ENST00000595659 hCG_1642624A0A1W2PR95 340 aa19.68■□□□□ 0.74
CCDC9-202ENST00000595659 CCDC69A6NI79 296 aa19.68■□□□□ 0.74
CCDC9-202ENST00000595659 SH2B2O14492 632 aaPredicted RBP19.68■□□□□ 0.74
CCDC9-202ENST00000595659 DDAH1O94760 285 aa19.68■□□□□ 0.74
CCDC9-202ENST00000595659 F2P00734 622 aa19.68■□□□□ 0.74
CCDC9-202ENST00000595659 KIF5BP33176 963 aa19.68■□□□□ 0.74
CCDC9-202ENST00000595659 MRPS9P82933 396 aaKnown RBP19.68■□□□□ 0.74
CCDC9-202ENST00000595659 GPNMBQ14956 572 aa19.68■□□□□ 0.74
CCDC9-202ENST00000595659 KCNV1Q6PIU1 500 aa19.68■□□□□ 0.74
CCDC9-202ENST00000595659 USP17L6PQ6QN14 398 aa19.68■□□□□ 0.74
CCDC9-202ENST00000595659 SRBD1Q8N5C6 995 aaKnown RBP19.68■□□□□ 0.74
CCDC9-202ENST00000595659 KATNAL1Q9BW62 490 aa19.68■□□□□ 0.74
CCDC9-202ENST00000595659 SPZ1Q9BXG8 430 aa19.68■□□□□ 0.74
CCDC9-202ENST00000595659 CERS4Q9HA82 394 aa19.68■□□□□ 0.74
CCDC9-202ENST00000595659 PCDHA11Q9Y5I1 949 aa19.68■□□□□ 0.74
CCDC9-202ENST00000595659 HAS3O00219 553 aa19.67■□□□□ 0.74
CCDC9-202ENST00000595659 PPFIA4O75335 1185 aa19.67■□□□□ 0.74
CCDC9-202ENST00000595659 HIC1Q14526 733 aa19.67■□□□□ 0.74
CCDC9-202ENST00000595659 NECTIN1Q15223 517 aa19.67■□□□□ 0.74
CCDC9-202ENST00000595659 CCDC82Q8N4S0 544 aa19.67■□□□□ 0.74
CCDC9-202ENST00000595659 CCDC155Q8N6L0 562 aa19.67■□□□□ 0.74
CCDC9-202ENST00000595659 CAGE1Q8TC20 777 aa19.67■□□□□ 0.74
CCDC9-202ENST00000595659 WNT8BQ93098 351 aa19.67■□□□□ 0.74
CCDC9-202ENST00000595659 SCN10AQ9Y5Y9 1956 aa19.66■□□□□ 0.74
CCDC9-202ENST00000595659 PRUNE2Q8WUY3 3088 aa19.66■□□□□ 0.74
CCDC9-202ENST00000595659 CA3P07451 260 aa19.66■□□□□ 0.74
CCDC9-202ENST00000595659 CKBP12277 381 aa19.66■□□□□ 0.74
CCDC9-202ENST00000595659 SELPP16109 830 aa19.66■□□□□ 0.74
CCDC9-202ENST00000595659 LRRC8DQ7L1W4 858 aa19.66■□□□□ 0.74
CCDC9-202ENST00000595659 TMCO2Q7Z6W1 182 aaPredicted RBP19.66■□□□□ 0.74
CCDC9-202ENST00000595659 SMARCC2Q8TAQ2 1214 aa19.66■□□□□ 0.74
CCDC9-202ENST00000595659 AFAP1L1Q8TED9 768 aa19.66■□□□□ 0.74
CCDC9-202ENST00000595659 TMEM87BQ96K49 555 aa19.66■□□□□ 0.74
CCDC9-202ENST00000595659 MAP3K14Q99558 947 aa19.66■□□□□ 0.74
CCDC9-202ENST00000595659 SEC63Q9UGP8 760 aaKnown RBP19.66■□□□□ 0.74
CCDC9-202ENST00000595659 TELO2Q9Y4R8 837 aa19.66■□□□□ 0.74
CCDC9-202ENST00000595659 RFXAPO00287 272 aa19.65■□□□□ 0.74
CCDC9-202ENST00000595659 TGFB3P10600 412 aa19.65■□□□□ 0.74
CCDC9-202ENST00000595659 HOXD8P13378 290 aaPredicted RBP19.65■□□□□ 0.74
CCDC9-202ENST00000595659 TCTN1Q2MV58 587 aa19.65■□□□□ 0.74
CCDC9-202ENST00000595659 CYFIP1Q7L576 1253 aa19.65■□□□□ 0.74
CCDC9-202ENST00000595659 TMTC2Q8N394 836 aa19.65■□□□□ 0.74
CCDC9-202ENST00000595659 CUL5Q93034 780 aa19.65■□□□□ 0.74
CCDC9-202ENST00000595659 C16orf70Q9BSU1 422 aa19.65■□□□□ 0.74
CCDC9-202ENST00000595659 CHD9Q3L8U1 2897 aa19.64■□□□□ 0.73
CCDC9-202ENST00000595659 MEIS2O14770 477 aa19.64■□□□□ 0.73
CCDC9-202ENST00000595659 NBNO60934 754 aa19.64■□□□□ 0.73
CCDC9-202ENST00000595659 ARHGEF15O94989 841 aa19.64■□□□□ 0.73
CCDC9-202ENST00000595659 GNAQP50148 359 aa19.64■□□□□ 0.73
CCDC9-202ENST00000595659 SP4Q02446 784 aa19.64■□□□□ 0.73
CCDC9-202ENST00000595659 SEMA3FQ13275 785 aa19.64■□□□□ 0.73
CCDC9-202ENST00000595659 HERC6Q8IVU3 1022 aa19.64■□□□□ 0.73
CCDC9-202ENST00000595659 MICALL1Q8N3F8 863 aa19.64■□□□□ 0.73
CCDC9-202ENST00000595659 SLC9A7Q96T83 725 aa19.64■□□□□ 0.73
CCDC9-202ENST00000595659 LZTS2Q9BRK4 669 aa19.64■□□□□ 0.73
CCDC9-202ENST00000595659 MTA3Q9BTC8 594 aa19.64■□□□□ 0.73
CCDC9-202ENST00000595659 SLC12A7Q9Y666 1083 aa19.64■□□□□ 0.73
CCDC9-202ENST00000595659 FRMPD4Q14CM0 1322 aa19.63■□□□□ 0.73
CCDC9-202ENST00000595659 SPATA31C2B4DYI2 1134 aa19.63■□□□□ 0.73
CCDC9-202ENST00000595659 NOP56O00567 594 aaKnown RBP19.63■□□□□ 0.73
CCDC9-202ENST00000595659 PTK7Q13308 1070 aa19.63■□□□□ 0.73
CCDC9-202ENST00000595659 TRIM71Q2Q1W2 868 aaKnown RBP19.63■□□□□ 0.73
CCDC9-202ENST00000595659 GNPTABQ3T906 1256 aa19.63■□□□□ 0.73
CCDC9-202ENST00000595659 ZNF618Q5T7W0 954 aa19.63■□□□□ 0.73
CCDC9-202ENST00000595659 PHOSPHO2Q8TCD6 241 aa19.63■□□□□ 0.73
CCDC9-202ENST00000595659 TCEANC2Q96MN5 208 aa19.63■□□□□ 0.73
CCDC9-202ENST00000595659 INPP4AQ96PE3 977 aaPredicted RBP19.63■□□□□ 0.73
CCDC9-202ENST00000595659 H3BRB1 525 aa19.62■□□□□ 0.73
CCDC9-202ENST00000595659 LGALS2P05162 132 aa19.62■□□□□ 0.73
CCDC9-202ENST00000595659 SMARCA1P28370 1054 aa19.62■□□□□ 0.73
CCDC9-202ENST00000595659 ICAM3P32942 547 aa19.62■□□□□ 0.73
CCDC9-202ENST00000595659 LIFRP42702 1097 aa19.62■□□□□ 0.73
CCDC9-202ENST00000595659 KCNJ6P48051 423 aa19.62■□□□□ 0.73
CCDC9-202ENST00000595659 UBE2SQ16763 222 aa19.62■□□□□ 0.73
CCDC9-202ENST00000595659 BMP2KLQ5H9B9 411 aa19.62■□□□□ 0.73
CCDC9-202ENST00000595659 TRAF7Q6Q0C0 670 aa19.62■□□□□ 0.73
CCDC9-202ENST00000595659 CENPQQ7L2Z9 268 aaPredicted RBP19.62■□□□□ 0.73
CCDC9-202ENST00000595659 MICU3Q86XE3 530 aa19.62■□□□□ 0.73
CCDC9-202ENST00000595659 FANCBQ8NB91 859 aa19.62■□□□□ 0.73
CCDC9-202ENST00000595659 TUT1Q9H6E5 874 aaKnown RBP19.62■□□□□ 0.73
CCDC9-202ENST00000595659 PSTPIP2Q9H939 334 aa19.62■□□□□ 0.73
CCDC9-202ENST00000595659 EPOPA6NHQ4 379 aa19.61■□□□□ 0.73
CCDC9-202ENST00000595659 FIBPO43427 364 aa19.61■□□□□ 0.73
CCDC9-202ENST00000595659 BAIAP3O94812 1187 aa19.61■□□□□ 0.73
CCDC9-202ENST00000595659 SMIM10L2AP0DMW4 78 aa19.61■□□□□ 0.73
CCDC9-202ENST00000595659 SMIM10L2BP0DMW5 78 aa19.61■□□□□ 0.73
CCDC9-202ENST00000595659 CALM1P0DP23 149 aa19.61■□□□□ 0.73
CCDC9-202ENST00000595659 CALM2P0DP24 149 aa19.61■□□□□ 0.73
CCDC9-202ENST00000595659 CALM3P0DP25 149 aa19.61■□□□□ 0.73
CCDC9-202ENST00000595659 THPOP40225 353 aa19.61■□□□□ 0.73
CCDC9-202ENST00000595659 WDR5P61964 334 aaKnown RBP19.61■□□□□ 0.73
CCDC9-202ENST00000595659 DEFB103AP81534 67 aa19.61■□□□□ 0.73
CCDC9-202ENST00000595659 TAP1Q03518 808 aa19.61■□□□□ 0.73
CCDC9-202ENST00000595659 RBL2Q08999 1139 aa19.61■□□□□ 0.73
CCDC9-202ENST00000595659 NEDD9Q14511 834 aa19.61■□□□□ 0.73
CCDC9-202ENST00000595659 MBTPS1Q14703 1052 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms