RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 SLC5A5Q92911 643 aa17.09■□□□□ 0.33
VRK3-207ENST00000594092 PAGE5Q96GU1 130 aa17.09■□□□□ 0.33
VRK3-207ENST00000594092 CAVIN2O95810 425 aa17.08■□□□□ 0.33
VRK3-207ENST00000594092 NR3C2P08235 984 aa17.08■□□□□ 0.33
VRK3-207ENST00000594092 PRR29P0C7W0 189 aa17.08■□□□□ 0.33
VRK3-207ENST00000594092 MYCLP12524 364 aaPredicted RBP17.08■□□□□ 0.33
VRK3-207ENST00000594092 STAT6P42226 847 aa17.08■□□□□ 0.33
VRK3-207ENST00000594092 UVSSAQ2YD98 709 aa17.08■□□□□ 0.33
VRK3-207ENST00000594092 ANO6Q4KMQ2 910 aa17.08■□□□□ 0.33
VRK3-207ENST00000594092 KRT79Q5XKE5 535 aa17.08■□□□□ 0.33
VRK3-207ENST00000594092 XRRA1Q6P2D8 792 aa17.08■□□□□ 0.33
VRK3-207ENST00000594092 LRRC15Q8TF66 581 aa17.08■□□□□ 0.33
VRK3-207ENST00000594092 CCDC34Q96HJ3 373 aa17.08■□□□□ 0.33
VRK3-207ENST00000594092 PLIN2Q99541 437 aa17.08■□□□□ 0.33
VRK3-207ENST00000594092 NUDT12Q9BQG2 462 aa17.08■□□□□ 0.33
VRK3-207ENST00000594092 WDR11Q9BZH6 1224 aa17.08■□□□□ 0.33
VRK3-207ENST00000594092 JADE2Q9NQC1 790 aa17.08■□□□□ 0.33
VRK3-207ENST00000594092 TUBE1Q9UJT0 475 aa17.08■□□□□ 0.33
VRK3-207ENST00000594092 VAV3Q9UKW4 847 aa17.08■□□□□ 0.33
VRK3-207ENST00000594092 PSMD10O75832 226 aa17.07■□□□□ 0.32
VRK3-207ENST00000594092 SLC10A3P09131 477 aa17.07■□□□□ 0.32
VRK3-207ENST00000594092 PLCG1P19174 1290 aa17.07■□□□□ 0.32
VRK3-207ENST00000594092 CCND2P30279 289 aa17.07■□□□□ 0.32
VRK3-207ENST00000594092 GCLCP48506 637 aaPredicted RBP17.07■□□□□ 0.32
VRK3-207ENST00000594092 CNTN2Q02246 1040 aa17.07■□□□□ 0.32
VRK3-207ENST00000594092 GRB10Q13322 594 aa17.07■□□□□ 0.32
VRK3-207ENST00000594092 VSIG10LQ86VR7 867 aa17.07■□□□□ 0.32
VRK3-207ENST00000594092 SNX29Q8TEQ0 813 aa17.07■□□□□ 0.32
VRK3-207ENST00000594092 CALML4Q96GE6 196 aa17.07■□□□□ 0.32
VRK3-207ENST00000594092 MANSC4A6NHS7 340 aaPredicted RBP17.07■□□□□ 0.32
VRK3-207ENST00000594092 AFMP43652 599 aa17.07■□□□□ 0.32
VRK3-207ENST00000594092 LRCH2Q5VUJ6 765 aa17.07■□□□□ 0.32
VRK3-207ENST00000594092 SHCBP1Q8NEM2 672 aa17.07■□□□□ 0.32
VRK3-207ENST00000594092 GPRC5AQ8NFJ5 357 aa17.07■□□□□ 0.32
VRK3-207ENST00000594092 DNERQ8NFT8 737 aa17.07■□□□□ 0.32
VRK3-207ENST00000594092 FAM200AQ8TCP9 573 aa17.07■□□□□ 0.32
VRK3-207ENST00000594092 PNMA5Q96PV4 448 aa17.07■□□□□ 0.32
VRK3-207ENST00000594092 PARK7Q99497 189 aaKnown RBP17.07■□□□□ 0.32
VRK3-207ENST00000594092 MTRQ99707 1265 aa17.07■□□□□ 0.32
VRK3-207ENST00000594092 ZNF577Q9BSK1 485 aa17.07■□□□□ 0.32
VRK3-207ENST00000594092 MROH8Q9H579 483 aa17.07■□□□□ 0.32
VRK3-207ENST00000594092 KCNH7Q9NS40 1196 aa17.07■□□□□ 0.32
VRK3-207ENST00000594092 ANO10Q9NW15 660 aa17.07■□□□□ 0.32
VRK3-207ENST00000594092 PCDHA5Q9Y5H7 936 aa17.07■□□□□ 0.32
VRK3-207ENST00000594092 ASTN1O14525 1302 aa17.06■□□□□ 0.32
VRK3-207ENST00000594092 A0A087WWV3 80 aa17.06■□□□□ 0.32
VRK3-207ENST00000594092 IPO5O00410 1097 aaKnown RBP17.06■□□□□ 0.32
VRK3-207ENST00000594092 TOMM70O94826 608 aa17.06■□□□□ 0.32
VRK3-207ENST00000594092 ANKRD13CQ8N6S4 541 aa17.06■□□□□ 0.32
VRK3-207ENST00000594092 PORCNQ9H237 461 aa17.06■□□□□ 0.32
VRK3-207ENST00000594092 CUEDC2Q9H467 287 aa17.06■□□□□ 0.32
VRK3-207ENST00000594092 MORF4L1Q9UBU8 362 aa17.06■□□□□ 0.32
VRK3-207ENST00000594092 POTEB2H3BUK9 544 aa17.05■□□□□ 0.32
VRK3-207ENST00000594092 MTMR1Q13613 665 aa17.05■□□□□ 0.32
VRK3-207ENST00000594092 TMEM119Q4V9L6 283 aa17.05■□□□□ 0.32
VRK3-207ENST00000594092 NCAPH2Q6IBW4 605 aa17.05■□□□□ 0.32
VRK3-207ENST00000594092 OTOP1Q7RTM1 612 aa17.05■□□□□ 0.32
VRK3-207ENST00000594092 STAMQ92783 540 aa17.05■□□□□ 0.32
VRK3-207ENST00000594092 CDK5RAP3Q96JB5 506 aa17.05■□□□□ 0.32
VRK3-207ENST00000594092 DNAJC25Q9H1X3 360 aa17.05■□□□□ 0.32
VRK3-207ENST00000594092 SOWAHBA6NEL2 793 aa17.05■□□□□ 0.32
VRK3-207ENST00000594092 TMEM88BA6NKF7 163 aa17.05■□□□□ 0.32
VRK3-207ENST00000594092 FAM155AB1AL88 458 aaPredicted RBP17.05■□□□□ 0.32
VRK3-207ENST00000594092 IGF2BP3O00425 579 aaKnown RBP eCLIP17.05■□□□□ 0.32
VRK3-207ENST00000594092 BIN1O00499 593 aa17.05■□□□□ 0.32
VRK3-207ENST00000594092 SLC26A4O43511 780 aa17.05■□□□□ 0.32
VRK3-207ENST00000594092 GAS7O60861 476 aa17.05■□□□□ 0.32
VRK3-207ENST00000594092 CCT6AP40227 531 aaKnown RBP17.05■□□□□ 0.32
VRK3-207ENST00000594092 CCNA1P78396 465 aa17.05■□□□□ 0.32
VRK3-207ENST00000594092 PPP2R5CQ13362 524 aa17.05■□□□□ 0.32
VRK3-207ENST00000594092 ECM1Q16610 540 aa17.05■□□□□ 0.32
VRK3-207ENST00000594092 HYIQ5T013 277 aa17.05■□□□□ 0.32
VRK3-207ENST00000594092 FAM133AQ8N9E0 248 aa17.05■□□□□ 0.32
VRK3-207ENST00000594092 SPATA20Q8TB22 786 aa17.05■□□□□ 0.32
VRK3-207ENST00000594092 IWS1Q96ST2 819 aa17.05■□□□□ 0.32
VRK3-207ENST00000594092 MMP19Q99542 508 aa17.05■□□□□ 0.32
VRK3-207ENST00000594092 RIT2Q99578 217 aa17.05■□□□□ 0.32
VRK3-207ENST00000594092 EFCC1Q9HA90 598 aa17.05■□□□□ 0.32
VRK3-207ENST00000594092 AGO4Q9HCK5 861 aaKnown RBP17.05■□□□□ 0.32
VRK3-207ENST00000594092 ABT1Q9ULW3 272 aaKnown RBP17.05■□□□□ 0.32
VRK3-207ENST00000594092 EML1O00423 815 aa17.04■□□□□ 0.32
VRK3-207ENST00000594092 CASP1P29466 404 aa17.04■□□□□ 0.32
VRK3-207ENST00000594092 SARSP49591 514 aaKnown RBP17.04■□□□□ 0.32
VRK3-207ENST00000594092 ALDH5A1P51649 535 aaPredicted RBP17.04■□□□□ 0.32
VRK3-207ENST00000594092 DPYDQ12882 1025 aa17.04■□□□□ 0.32
VRK3-207ENST00000594092 NT5DC1Q5TFE4 455 aa17.04■□□□□ 0.32
VRK3-207ENST00000594092 WDR78Q5VTH9 848 aa17.04■□□□□ 0.32
VRK3-207ENST00000594092 SMARCE1Q969G3 411 aa17.04■□□□□ 0.32
VRK3-207ENST00000594092 CCDC102AQ96A19 550 aa17.04■□□□□ 0.32
VRK3-207ENST00000594092 INPP4AQ96PE3 977 aaPredicted RBP17.04■□□□□ 0.32
VRK3-207ENST00000594092 TEKT3Q9BXF9 490 aa17.04■□□□□ 0.32
VRK3-207ENST00000594092 MAGEF1Q9HAY2 307 aa17.04■□□□□ 0.32
VRK3-207ENST00000594092 BLOC1S4Q9NUP1 217 aa17.04■□□□□ 0.32
VRK3-207ENST00000594092 KBTBD4Q9NVX7 518 aa17.04■□□□□ 0.32
VRK3-207ENST00000594092 KDM3AQ9Y4C1 1321 aa17.04■□□□□ 0.32
VRK3-207ENST00000594092 DHX15O43143 795 aaKnown RBP17.03■□□□□ 0.32
VRK3-207ENST00000594092 GTPBP6O43824 516 aaPredicted RBP17.03■□□□□ 0.32
VRK3-207ENST00000594092 MED24O75448 989 aa17.03■□□□□ 0.32
VRK3-207ENST00000594092 STAM2O75886 525 aa17.03■□□□□ 0.32
VRK3-207ENST00000594092 ZNF165P49910 485 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms