RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 MMTAG2Q9BU76 263 aaKnown RBP14.87□□□□□ -0.03
VRK3-205ENST00000593919 TRIM5Q9C035 493 aa14.87□□□□□ -0.03
VRK3-205ENST00000593919 ANO10Q9NW15 660 aa14.87□□□□□ -0.03
VRK3-205ENST00000593919 MRPS9P82933 396 aaKnown RBP14.86□□□□□ -0.03
VRK3-205ENST00000593919 MDM2Q00987 491 aaPredicted RBP14.86□□□□□ -0.03
VRK3-205ENST00000593919 SETQ01105 290 aaPredicted RBP14.86□□□□□ -0.03
VRK3-205ENST00000593919 POSTNQ15063 836 aa14.86□□□□□ -0.03
VRK3-205ENST00000593919 ZRSR1Q15695 479 aaKnown RBP14.86□□□□□ -0.03
VRK3-205ENST00000593919 ARHGEF16Q5VV41 709 aa14.86□□□□□ -0.03
VRK3-205ENST00000593919 NCAPG2Q86XI2 1143 aa14.86□□□□□ -0.03
VRK3-205ENST00000593919 RASAL3Q86YV0 1011 aa14.86□□□□□ -0.03
VRK3-205ENST00000593919 FAM20AQ96MK3 541 aa14.86□□□□□ -0.03
VRK3-205ENST00000593919 PDCD2LQ9BRP1 358 aa14.86□□□□□ -0.03
VRK3-205ENST00000593919 MAF1Q9H063 256 aa14.86□□□□□ -0.03
VRK3-205ENST00000593919 FBXO40Q9UH90 709 aa14.86□□□□□ -0.03
VRK3-205ENST00000593919 SLC45A1Q9Y2W3 748 aa14.86□□□□□ -0.03
VRK3-205ENST00000593919 GOLGA6L6A8MZA4 724 aa14.85□□□□□ -0.03
VRK3-205ENST00000593919 MEIS1O00470 390 aa14.85□□□□□ -0.03
VRK3-205ENST00000593919 ITGB5P18084 799 aa14.85□□□□□ -0.03
VRK3-205ENST00000593919 STAT6P42226 847 aa14.85□□□□□ -0.03
VRK3-205ENST00000593919 ZNF157P51786 506 aaPredicted RBP14.85□□□□□ -0.03
VRK3-205ENST00000593919 ZNF75DP51815 510 aa14.85□□□□□ -0.03
VRK3-205ENST00000593919 SPIRE1Q08AE8 756 aa14.85□□□□□ -0.03
VRK3-205ENST00000593919 Q3C1V9 767 aa14.85□□□□□ -0.03
VRK3-205ENST00000593919 NAALADL2Q58DX5 795 aa14.85□□□□□ -0.03
VRK3-205ENST00000593919 KANK3Q6NY19 840 aa14.85□□□□□ -0.03
VRK3-205ENST00000593919 PDXDC2PQ6P474 469 aa14.85□□□□□ -0.03
VRK3-205ENST00000593919 ANKRD23Q86SG2 305 aa14.85□□□□□ -0.03
VRK3-205ENST00000593919 SMCR8Q8TEV9 937 aaPredicted RBP14.85□□□□□ -0.03
VRK3-205ENST00000593919 PLIN2Q99541 437 aa14.85□□□□□ -0.03
VRK3-205ENST00000593919 PTPN18Q99952 460 aa14.85□□□□□ -0.03
VRK3-205ENST00000593919 MXRA8Q9BRK3 442 aa14.85□□□□□ -0.03
VRK3-205ENST00000593919 R3HDMLQ9H3Y0 253 aa14.85□□□□□ -0.03
VRK3-205ENST00000593919 HOOK1Q9UJC3 728 aaKnown RBP14.85□□□□□ -0.03
VRK3-205ENST00000593919 PRR29P0C7W0 189 aa14.85□□□□□ -0.03
VRK3-205ENST00000593919 PLCG1P19174 1290 aa14.85□□□□□ -0.03
VRK3-205ENST00000593919 ERCC3P19447 782 aa14.85□□□□□ -0.03
VRK3-205ENST00000593919 ERVK-9P63128 1117 aa14.85□□□□□ -0.03
VRK3-205ENST00000593919 ERVK-24P63145 666 aa14.85□□□□□ -0.03
VRK3-205ENST00000593919 RRAGBQ5VZM2 374 aa14.85□□□□□ -0.03
VRK3-205ENST00000593919 DRC7Q8IY82 874 aa14.85□□□□□ -0.03
VRK3-205ENST00000593919 ANKRD35Q8N283 1001 aa14.85□□□□□ -0.03
VRK3-205ENST00000593919 LRRC15Q8TF66 581 aa14.85□□□□□ -0.03
VRK3-205ENST00000593919 PFASO15067 1338 aa14.85□□□□□ -0.03
VRK3-205ENST00000593919 PCNTO95613 3336 aa14.85□□□□□ -0.03
VRK3-205ENST00000593919 BECN2A8MW95 431 aa14.84□□□□□ -0.03
VRK3-205ENST00000593919 SLC25A27O95847 323 aa14.84□□□□□ -0.03
VRK3-205ENST00000593919 ARP10275 920 aa14.84□□□□□ -0.03
VRK3-205ENST00000593919 MYCLP12524 364 aaPredicted RBP14.84□□□□□ -0.03
VRK3-205ENST00000593919 AFMP43652 599 aa14.84□□□□□ -0.03
VRK3-205ENST00000593919 SH3RF1Q7Z6J0 888 aa14.84□□□□□ -0.03
VRK3-205ENST00000593919 NSUN6Q8TEA1 469 aaKnown RBP14.84□□□□□ -0.03
VRK3-205ENST00000593919 SNX29Q8TEQ0 813 aa14.84□□□□□ -0.03
VRK3-205ENST00000593919 PAGE5Q96GU1 130 aa14.84□□□□□ -0.03
VRK3-205ENST00000593919 CCDC34Q96HJ3 373 aa14.84□□□□□ -0.03
VRK3-205ENST00000593919 NUDT12Q9BQG2 462 aa14.84□□□□□ -0.03
VRK3-205ENST00000593919 WDR11Q9BZH6 1224 aa14.84□□□□□ -0.03
VRK3-205ENST00000593919 TUBE1Q9UJT0 475 aa14.84□□□□□ -0.03
VRK3-205ENST00000593919 UBIAD1Q9Y5Z9 338 aa14.84□□□□□ -0.03
VRK3-205ENST00000593919 MCM3APO60318 1980 aa14.84□□□□□ -0.03
VRK3-205ENST00000593919 DOCK5Q9H7D0 1870 aa14.84□□□□□ -0.03
VRK3-205ENST00000593919 BCRP11274 1271 aa14.84□□□□□ -0.03
VRK3-205ENST00000593919 KRT79Q5XKE5 535 aa14.84□□□□□ -0.03
VRK3-205ENST00000593919 RGMBQ6NW40 437 aa14.84□□□□□ -0.03
VRK3-205ENST00000593919 AOPEPQ8N6M6 819 aa14.84□□□□□ -0.03
VRK3-205ENST00000593919 SMC1BQ8NDV3 1235 aa14.84□□□□□ -0.03
VRK3-205ENST00000593919 GTF3C2Q8WUA4 911 aaPredicted RBP14.84□□□□□ -0.03
VRK3-205ENST00000593919 STAMQ92783 540 aa14.84□□□□□ -0.03
VRK3-205ENST00000593919 CALML4Q96GE6 196 aa14.84□□□□□ -0.03
VRK3-205ENST00000593919 MTRQ99707 1265 aa14.84□□□□□ -0.03
VRK3-205ENST00000593919 KCNF1Q9H3M0 494 aa14.84□□□□□ -0.03
VRK3-205ENST00000593919 VAV3Q9UKW4 847 aa14.84□□□□□ -0.03
VRK3-205ENST00000593919 PCDHA5Q9Y5H7 936 aa14.84□□□□□ -0.03
VRK3-205ENST00000593919 PLXNB2O15031 1838 aa14.83□□□□□ -0.03
VRK3-205ENST00000593919 BIN1O00499 593 aa14.83□□□□□ -0.04
VRK3-205ENST00000593919 NR3C2P08235 984 aa14.83□□□□□ -0.04
VRK3-205ENST00000593919 CASP1P29466 404 aa14.83□□□□□ -0.04
VRK3-205ENST00000593919 CNTN2Q02246 1040 aa14.83□□□□□ -0.04
VRK3-205ENST00000593919 GRB10Q13322 594 aa14.83□□□□□ -0.04
VRK3-205ENST00000593919 LRCH2Q5VUJ6 765 aa14.83□□□□□ -0.04
VRK3-205ENST00000593919 NIPA1Q7RTP0 329 aa14.83□□□□□ -0.04
VRK3-205ENST00000593919 DHX40Q8IX18 779 aaKnown RBP14.83□□□□□ -0.04
VRK3-205ENST00000593919 C17orf53Q8N3J3 647 aaPredicted RBP14.83□□□□□ -0.04
VRK3-205ENST00000593919 SLC5A5Q92911 643 aa14.83□□□□□ -0.04
VRK3-205ENST00000593919 ZNF577Q9BSK1 485 aa14.83□□□□□ -0.04
VRK3-205ENST00000593919 KCNH7Q9NS40 1196 aa14.83□□□□□ -0.04
VRK3-205ENST00000593919 ASTN1O14525 1302 aa14.83□□□□□ -0.04
VRK3-205ENST00000593919 WDR81Q562E7 1941 aa14.82□□□□□ -0.04
VRK3-205ENST00000593919 IPO5O00410 1097 aaKnown RBP14.82□□□□□ -0.04
VRK3-205ENST00000593919 PSMD10O75832 226 aa14.82□□□□□ -0.04
VRK3-205ENST00000593919 TPM3P06753 285 aa14.82□□□□□ -0.04
VRK3-205ENST00000593919 PTGS1P23219 599 aa14.82□□□□□ -0.04
VRK3-205ENST00000593919 CCND2P30279 289 aa14.82□□□□□ -0.04
VRK3-205ENST00000593919 COPB2P35606 906 aa14.82□□□□□ -0.04
VRK3-205ENST00000593919 MTMR1Q13613 665 aa14.82□□□□□ -0.04
VRK3-205ENST00000593919 NCAPH2Q6IBW4 605 aa14.82□□□□□ -0.04
VRK3-205ENST00000593919 VSIG10LQ86VR7 867 aa14.82□□□□□ -0.04
VRK3-205ENST00000593919 ANKRD13CQ8N6S4 541 aa14.82□□□□□ -0.04
VRK3-205ENST00000593919 CDK5RAP3Q96JB5 506 aa14.82□□□□□ -0.04
VRK3-205ENST00000593919 PNMA5Q96PV4 448 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms