RNA–Protein interactions for RNA: ENST00000593742.1

SOD3-202, Transcript of superoxide dismutase 3, humanhuman

TSL 5

Gene SOD3, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD3-202ENST00000593742 GNPTABQ3T906 1256 aa13.81□□□□□ -0.2
SOD3-202ENST00000593742 FAM109BQ6ICB4 259 aaPredicted RBP13.81□□□□□ -0.2
SOD3-202ENST00000593742 NFRKBQ6P4R8 1299 aa13.81□□□□□ -0.2
SOD3-202ENST00000593742 DEFB128Q7Z7B8 93 aa13.81□□□□□ -0.2
SOD3-202ENST00000593742 SGMS1Q86VZ5 419 aa13.81□□□□□ -0.2
SOD3-202ENST00000593742 JAKMIP1Q96N16 626 aaKnown RBP13.81□□□□□ -0.2
SOD3-202ENST00000593742 MLXIPQ9HAP2 919 aa13.81□□□□□ -0.2
SOD3-202ENST00000593742 BRPF3Q9ULD4 1205 aa13.81□□□□□ -0.2
SOD3-202ENST00000593742 MYO9BQ13459 2157 aa13.81□□□□□ -0.2
SOD3-202ENST00000593742 KLF18A0A0U1RQI7 1052 aa13.8□□□□□ -0.2
SOD3-202ENST00000593742 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.8□□□□□ -0.2
SOD3-202ENST00000593742 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.8□□□□□ -0.2
SOD3-202ENST00000593742 GOLGA8AA7E2F4 631 aa13.8□□□□□ -0.2
SOD3-202ENST00000593742 GOLGA8BA8MQT2 603 aa13.8□□□□□ -0.2
SOD3-202ENST00000593742 ZBBXA8MT70 800 aa13.8□□□□□ -0.2
SOD3-202ENST00000593742 ZBTB43O43298 467 aa13.8□□□□□ -0.2
SOD3-202ENST00000593742 FGBP02675 491 aa13.8□□□□□ -0.2
SOD3-202ENST00000593742 CD44P16070 742 aaKnown RBP13.8□□□□□ -0.2
SOD3-202ENST00000593742 SMARCA1P28370 1054 aa13.8□□□□□ -0.2
SOD3-202ENST00000593742 PSEN2P49810 448 aa13.8□□□□□ -0.2
SOD3-202ENST00000593742 EXOSC10Q01780 885 aaKnown RBP13.8□□□□□ -0.2
SOD3-202ENST00000593742 SP2Q02086 613 aa13.8□□□□□ -0.2
SOD3-202ENST00000593742 SP4Q02446 784 aa13.8□□□□□ -0.2
SOD3-202ENST00000593742 CELF3Q5SZQ8 465 aaKnown RBP13.8□□□□□ -0.2
SOD3-202ENST00000593742 KCNV1Q6PIU1 500 aa13.8□□□□□ -0.2
SOD3-202ENST00000593742 APOA5Q6Q788 366 aa13.8□□□□□ -0.2
SOD3-202ENST00000593742 C7orf31Q8N865 590 aa13.8□□□□□ -0.2
SOD3-202ENST00000593742 PPTC7Q8NI37 304 aa13.8□□□□□ -0.2
SOD3-202ENST00000593742 KAT2BQ92831 832 aa13.8□□□□□ -0.2
SOD3-202ENST00000593742 GUCD1Q96NT3 240 aa13.8□□□□□ -0.2
SOD3-202ENST00000593742 PSTPIP2Q9H939 334 aa13.8□□□□□ -0.2
SOD3-202ENST00000593742 RBM28Q9NW13 759 aaKnown RBP13.8□□□□□ -0.2
SOD3-202ENST00000593742 NOP56O00567 594 aaKnown RBP13.79□□□□□ -0.2
SOD3-202ENST00000593742 MEIS2O14770 477 aa13.79□□□□□ -0.2
SOD3-202ENST00000593742 DNAJB2P25686 324 aa13.79□□□□□ -0.2
SOD3-202ENST00000593742 MRPS9P82933 396 aaKnown RBP13.79□□□□□ -0.2
SOD3-202ENST00000593742 MFSD10Q14728 455 aa13.79□□□□□ -0.2
SOD3-202ENST00000593742 KIAA0753Q2KHM9 967 aa13.79□□□□□ -0.2
SOD3-202ENST00000593742 HSDL1Q3SXM5 330 aa13.79□□□□□ -0.2
SOD3-202ENST00000593742 MYSM1Q5VVJ2 828 aa13.79□□□□□ -0.2
SOD3-202ENST00000593742 GDF6Q6KF10 455 aaPredicted RBP13.79□□□□□ -0.2
SOD3-202ENST00000593742 Q6ZUG5 572 aa13.79□□□□□ -0.2
SOD3-202ENST00000593742 RETREG2Q8NC44 543 aa13.79□□□□□ -0.2
SOD3-202ENST00000593742 EMID1Q96A84 441 aaPredicted RBP13.79□□□□□ -0.2
SOD3-202ENST00000593742 KATNAL1Q9BW62 490 aa13.79□□□□□ -0.2
SOD3-202ENST00000593742 MTIF3Q9H2K0 278 aaKnown RBP13.79□□□□□ -0.2
SOD3-202ENST00000593742 TTYH1Q9H313 450 aaPredicted RBP13.79□□□□□ -0.2
SOD3-202ENST00000593742 PKD2L1Q9P0L9 805 aa13.79□□□□□ -0.2
SOD3-202ENST00000593742 CXXC1Q9P0U4 656 aaPredicted RBP13.79□□□□□ -0.2
SOD3-202ENST00000593742 CNTNAP5Q8WYK1 1306 aa13.79□□□□□ -0.2
SOD3-202ENST00000593742 SCN5AQ14524 2016 aa13.79□□□□□ -0.2
SOD3-202ENST00000593742 DOCK5Q9H7D0 1870 aa13.78□□□□□ -0.2
SOD3-202ENST00000593742 SPDYE3A6NKU9 549 aa13.78□□□□□ -0.2
SOD3-202ENST00000593742 PBX2P40425 430 aa13.78□□□□□ -0.2
SOD3-202ENST00000593742 NAPAP54920 295 aa13.78□□□□□ -0.2
SOD3-202ENST00000593742 PTPN11Q06124 597 aaPredicted RBP13.78□□□□□ -0.2
SOD3-202ENST00000593742 APOBRQ0VD83 1088 aa13.78□□□□□ -0.2
SOD3-202ENST00000593742 TSGA10IPQ3SY00 556 aa13.78□□□□□ -0.2
SOD3-202ENST00000593742 WWC2Q6AWC2 1192 aa13.78□□□□□ -0.2
SOD3-202ENST00000593742 BLOC1S2Q6QNY1 142 aa13.78□□□□□ -0.2
SOD3-202ENST00000593742 CYFIP1Q7L576 1253 aa13.78□□□□□ -0.2
SOD3-202ENST00000593742 RPUSD2Q8IZ73 545 aaKnown RBP13.78□□□□□ -0.2
SOD3-202ENST00000593742 FTOQ9C0B1 505 aaKnown RBP eCLIP13.78□□□□□ -0.2
SOD3-202ENST00000593742 SEMA6BQ9H3T3 888 aa13.78□□□□□ -0.2
SOD3-202ENST00000593742 BCAS3Q9H6U6 928 aa13.78□□□□□ -0.2
SOD3-202ENST00000593742 HDAC6Q9UBN7 1215 aa13.78□□□□□ -0.2
SOD3-202ENST00000593742 STXBP5LQ9Y2K9 1186 aa13.78□□□□□ -0.2
SOD3-202ENST00000593742 SNX14Q9Y5W7 946 aa13.78□□□□□ -0.2
SOD3-202ENST00000593742 FRMPD4Q14CM0 1322 aa13.78□□□□□ -0.2
SOD3-202ENST00000593742 TRIP12Q14669 1992 aaPredicted RBP13.78□□□□□ -0.2
SOD3-202ENST00000593742 RBAK-RBAKDNI3L0D1 243 aa13.77□□□□□ -0.21
SOD3-202ENST00000593742 PIK3CDO00329 1044 aa13.77□□□□□ -0.21
SOD3-202ENST00000593742 FIBPO43427 364 aa13.77□□□□□ -0.21
SOD3-202ENST00000593742 REC8O95072 547 aa13.77□□□□□ -0.21
SOD3-202ENST00000593742 F2P00734 622 aa13.77□□□□□ -0.21
SOD3-202ENST00000593742 HMGB1P09429 215 aaKnown RBP13.77□□□□□ -0.21
SOD3-202ENST00000593742 HSPA4P34932 840 aa13.77□□□□□ -0.21
SOD3-202ENST00000593742 METAP2P50579 478 aaKnown RBP eCLIP13.77□□□□□ -0.21
SOD3-202ENST00000593742 SEMA3FQ13275 785 aa13.77□□□□□ -0.21
SOD3-202ENST00000593742 BFSP2Q13515 415 aa13.77□□□□□ -0.21
SOD3-202ENST00000593742 PCNX4Q63HM2 1172 aa13.77□□□□□ -0.21
SOD3-202ENST00000593742 SLC17A8Q8NDX2 589 aa13.77□□□□□ -0.21
SOD3-202ENST00000593742 MYLIPQ8WY64 445 aa13.77□□□□□ -0.21
SOD3-202ENST00000593742 HERVK_113Q902F9 699 aa13.77□□□□□ -0.21
SOD3-202ENST00000593742 BRF1Q92994 677 aa13.77□□□□□ -0.21
SOD3-202ENST00000593742 TIFAQ96CG3 184 aa13.77□□□□□ -0.21
SOD3-202ENST00000593742 PGBD1Q96JS3 809 aa13.77□□□□□ -0.21
SOD3-202ENST00000593742 CDX2Q99626 313 aaPredicted RBP13.77□□□□□ -0.21
SOD3-202ENST00000593742 PBX4Q9BYU1 374 aa13.77□□□□□ -0.21
SOD3-202ENST00000593742 V9GY48 417 aaPredicted RBP13.77□□□□□ -0.21
SOD3-202ENST00000593742 PPFIA3O75145 1194 aa13.76□□□□□ -0.21
SOD3-202ENST00000593742 STAM2O75886 525 aa13.76□□□□□ -0.21
SOD3-202ENST00000593742 TGFB3P10600 412 aa13.76□□□□□ -0.21
SOD3-202ENST00000593742 CDC27P30260 824 aa13.76□□□□□ -0.21
SOD3-202ENST00000593742 NUBP1P53384 320 aa13.76□□□□□ -0.21
SOD3-202ENST00000593742 ZNF200P98182 395 aaPredicted RBP13.76□□□□□ -0.21
SOD3-202ENST00000593742 NEDD9Q14511 834 aa13.76□□□□□ -0.21
SOD3-202ENST00000593742 UTP14CQ5TAP6 766 aaKnown RBP13.76□□□□□ -0.21
SOD3-202ENST00000593742 NLRX1Q86UT6 975 aa13.76□□□□□ -0.21
SOD3-202ENST00000593742 CCDC155Q8N6L0 562 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms