RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 PPTC7Q8NI37 304 aa19.03■□□□□ 0.64
LIG1-205ENST00000593425 KATNAL1Q9BW62 490 aa19.03■□□□□ 0.64
LIG1-205ENST00000593425 ZBTB5O15062 677 aa19.02■□□□□ 0.64
LIG1-205ENST00000593425 LPXNO60711 386 aa19.02■□□□□ 0.64
LIG1-205ENST00000593425 HOXD8P13378 290 aaPredicted RBP19.02■□□□□ 0.64
LIG1-205ENST00000593425 HOXA13P31271 388 aaPredicted RBP19.02■□□□□ 0.64
LIG1-205ENST00000593425 ZNF200P98182 395 aaPredicted RBP19.02■□□□□ 0.64
LIG1-205ENST00000593425 GRB10Q13322 594 aa19.02■□□□□ 0.64
LIG1-205ENST00000593425 HIC1Q14526 733 aa19.02■□□□□ 0.64
LIG1-205ENST00000593425 PGM5Q15124 567 aa19.02■□□□□ 0.64
LIG1-205ENST00000593425 TRIM71Q2Q1W2 868 aaKnown RBP19.02■□□□□ 0.64
LIG1-205ENST00000593425 PCDHA1Q9Y5I3 950 aa19.02■□□□□ 0.64
LIG1-205ENST00000593425 SIP14410 1827 aa19.02■□□□□ 0.63
LIG1-205ENST00000593425 XIRP2A4UGR9 3374 aa19.01■□□□□ 0.63
LIG1-205ENST00000593425 PALM3A6NDB9 673 aaPredicted RBP19.01■□□□□ 0.63
LIG1-205ENST00000593425 PTK7Q13308 1070 aa19.01■□□□□ 0.63
LIG1-205ENST00000593425 MBTPS1Q14703 1052 aa19.01■□□□□ 0.63
LIG1-205ENST00000593425 HSDL1Q3SXM5 330 aa19.01■□□□□ 0.63
LIG1-205ENST00000593425 MYSM1Q5VVJ2 828 aa19.01■□□□□ 0.63
LIG1-205ENST00000593425 STOX1Q6ZVD7 989 aa19.01■□□□□ 0.63
LIG1-205ENST00000593425 HOMER1Q86YM7 354 aa19.01■□□□□ 0.63
LIG1-205ENST00000593425 GPKOWQ92917 476 aaPredicted RBP eCLIP19.01■□□□□ 0.63
LIG1-205ENST00000593425 ZFP91Q96JP5 570 aaPredicted RBP19.01■□□□□ 0.63
LIG1-205ENST00000593425 RAPGEFL1Q9UHV5 662 aa19.01■□□□□ 0.63
LIG1-205ENST00000593425 DOCK5Q9H7D0 1870 aa19.01■□□□□ 0.63
LIG1-205ENST00000593425 PARNO95453 639 aaKnown RBP19■□□□□ 0.63
LIG1-205ENST00000593425 GGPS1O95749 300 aa19■□□□□ 0.63
LIG1-205ENST00000593425 GSPT1P15170 499 aaKnown RBP19■□□□□ 0.63
LIG1-205ENST00000593425 SP2Q02086 613 aa19■□□□□ 0.63
LIG1-205ENST00000593425 AAK1Q2M2I8 961 aa19■□□□□ 0.63
LIG1-205ENST00000593425 ZNF618Q5T7W0 954 aa19■□□□□ 0.63
LIG1-205ENST00000593425 VSIG10LQ86VR7 867 aa19■□□□□ 0.63
LIG1-205ENST00000593425 YTHDC1Q96MU7 727 aaKnown RBP19■□□□□ 0.63
LIG1-205ENST00000593425 PIGSQ96S52 555 aa19■□□□□ 0.63
LIG1-205ENST00000593425 SENP2Q9HC62 589 aa19■□□□□ 0.63
LIG1-205ENST00000593425 MAP3K20Q9NYL2 800 aaKnown RBP19■□□□□ 0.63
LIG1-205ENST00000593425 TRANK1O15050 2925 aa19■□□□□ 0.63
LIG1-205ENST00000593425 UBA1P22314 1058 aaKnown RBP18.99■□□□□ 0.63
LIG1-205ENST00000593425 PDE4AP27815 886 aa18.99■□□□□ 0.63
LIG1-205ENST00000593425 GRM4Q14833 912 aa18.99■□□□□ 0.63
LIG1-205ENST00000593425 CELF3Q5SZQ8 465 aaKnown RBP18.99■□□□□ 0.63
LIG1-205ENST00000593425 GDPD5Q8WTR4 605 aa18.99■□□□□ 0.63
LIG1-205ENST00000593425 SPATA33Q96N06 139 aa18.99■□□□□ 0.63
LIG1-205ENST00000593425 ZBED2Q9BTP6 218 aa18.99■□□□□ 0.63
LIG1-205ENST00000593425 RIOX1Q9H6W3 641 aa18.99■□□□□ 0.63
LIG1-205ENST00000593425 MICAL3Q7RTP6 2002 aa18.99■□□□□ 0.63
LIG1-205ENST00000593425 ABHD14A-ACY1A0A1B0GW23 586 aa18.98■□□□□ 0.63
LIG1-205ENST00000593425 CYTH3O43739 400 aa18.98■□□□□ 0.63
LIG1-205ENST00000593425 PPFIA4O75335 1185 aa18.98■□□□□ 0.63
LIG1-205ENST00000593425 GJB5O95377 273 aa18.98■□□□□ 0.63
LIG1-205ENST00000593425 CYP21A2P08686 494 aa18.98■□□□□ 0.63
LIG1-205ENST00000593425 C16orf70Q9BSU1 422 aa18.98■□□□□ 0.63
LIG1-205ENST00000593425 MTUS1Q9ULD2 1270 aa18.98■□□□□ 0.63
LIG1-205ENST00000593425 COG5Q9UP83 839 aa18.98■□□□□ 0.63
LIG1-205ENST00000593425 TAF6LQ9Y6J9 622 aa18.98■□□□□ 0.63
LIG1-205ENST00000593425 PTH1RQ03431 593 aa18.97■□□□□ 0.63
LIG1-205ENST00000593425 TTC22Q5TAA0 569 aa18.97■□□□□ 0.63
LIG1-205ENST00000593425 FAM117BQ6P1L5 589 aa18.97■□□□□ 0.63
LIG1-205ENST00000593425 KCNV1Q6PIU1 500 aa18.97■□□□□ 0.63
LIG1-205ENST00000593425 FCHSD1Q86WN1 690 aa18.97■□□□□ 0.63
LIG1-205ENST00000593425 SAMD3Q8N6K7 520 aa18.97■□□□□ 0.63
LIG1-205ENST00000593425 BCAS3Q9H6U6 928 aa18.97■□□□□ 0.63
LIG1-205ENST00000593425 BAZ2BQ9UIF8 2168 aaKnown RBP18.97■□□□□ 0.63
LIG1-205ENST00000593425 LINC01553A4QN01 128 aa18.96■□□□□ 0.63
LIG1-205ENST00000593425 GCOM1H8Y6P7 765 aaPredicted RBP18.96■□□□□ 0.63
LIG1-205ENST00000593425 POLR2MP0CAP2 368 aa18.96■□□□□ 0.63
LIG1-205ENST00000593425 CCND2P30279 289 aa18.96■□□□□ 0.63
LIG1-205ENST00000593425 TRDNQ13061 729 aa18.96■□□□□ 0.63
LIG1-205ENST00000593425 IKBKEQ14164 716 aa18.96■□□□□ 0.63
LIG1-205ENST00000593425 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.96■□□□□ 0.63
LIG1-205ENST00000593425 RAD9AQ99638 391 aa18.96■□□□□ 0.63
LIG1-205ENST00000593425 IFIT3O14879 490 aaKnown RBP18.95■□□□□ 0.62
LIG1-205ENST00000593425 LGR5O75473 907 aa18.95■□□□□ 0.62
LIG1-205ENST00000593425 TGFB3P10600 412 aa18.95■□□□□ 0.62
LIG1-205ENST00000593425 TROAPQ12815 778 aa18.95■□□□□ 0.62
LIG1-205ENST00000593425 MKRN4PQ13434 485 aaPredicted RBP18.95■□□□□ 0.62
LIG1-205ENST00000593425 SERINC5Q86VE9 423 aa18.95■□□□□ 0.62
LIG1-205ENST00000593425 HLA-CQ95604 372 aa18.95■□□□□ 0.62
LIG1-205ENST00000593425 SUGCTQ9HAC7 445 aa18.95■□□□□ 0.62
LIG1-205ENST00000593425 MLXIPQ9HAP2 919 aa18.95■□□□□ 0.62
LIG1-205ENST00000593425 FRMPD4Q14CM0 1322 aa18.95■□□□□ 0.62
LIG1-205ENST00000593425 EFCAB14O75071 495 aa18.94■□□□□ 0.62
LIG1-205ENST00000593425 LGALS2P05162 132 aa18.94■□□□□ 0.62
LIG1-205ENST00000593425 HOXC8P31273 242 aa18.94■□□□□ 0.62
LIG1-205ENST00000593425 THPOP40225 353 aa18.94■□□□□ 0.62
LIG1-205ENST00000593425 ERVK-21P61565 698 aa18.94■□□□□ 0.62
LIG1-205ENST00000593425 MRPS9P82933 396 aaKnown RBP18.94■□□□□ 0.62
LIG1-205ENST00000593425 WTAPQ15007 396 aa18.94■□□□□ 0.62
LIG1-205ENST00000593425 DBF4BQ8NFT6 615 aa18.94■□□□□ 0.62
LIG1-205ENST00000593425 TGS1Q96RS0 853 aaKnown RBP18.94■□□□□ 0.62
LIG1-205ENST00000593425 U3KPZ7 1027 aaPredicted RBP18.94■□□□□ 0.62
LIG1-205ENST00000593425 PNMA6FA0A0J9YX94 578 aa18.93■□□□□ 0.62
LIG1-205ENST00000593425 C17orf102A2RUQ5 167 aa18.93■□□□□ 0.62
LIG1-205ENST00000593425 RSPH10B2B2RC85 870 aa18.93■□□□□ 0.62
LIG1-205ENST00000593425 E7EWF7 191 aa18.93■□□□□ 0.62
LIG1-205ENST00000593425 H3BRB1 525 aa18.93■□□□□ 0.62
LIG1-205ENST00000593425 TREHO43280 583 aa18.93■□□□□ 0.62
LIG1-205ENST00000593425 RSPH10BP0C881 870 aa18.93■□□□□ 0.62
LIG1-205ENST00000593425 SMIM10L2AP0DMW4 78 aa18.93■□□□□ 0.62
LIG1-205ENST00000593425 SMIM10L2BP0DMW5 78 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms