RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 CELF3Q5SZQ8 465 aaKnown RBP23.71■■□□□ 1.39
TRIM47-207ENST00000593089 CATIPQ7Z7H3 387 aa23.71■■□□□ 1.39
TRIM47-207ENST00000593089 HERC6Q8IVU3 1022 aa23.71■■□□□ 1.39
TRIM47-207ENST00000593089 SPATA33Q96N06 139 aa23.71■■□□□ 1.39
TRIM47-207ENST00000593089 PTPRSQ13332 1948 aa23.71■■□□□ 1.39
TRIM47-207ENST00000593089 HAS3O00219 553 aa23.7■■□□□ 1.38
TRIM47-207ENST00000593089 RFXAPO00287 272 aa23.7■■□□□ 1.38
TRIM47-207ENST00000593089 BAIAP3O94812 1187 aa23.7■■□□□ 1.38
TRIM47-207ENST00000593089 CKBP12277 381 aa23.7■■□□□ 1.38
TRIM47-207ENST00000593089 SP2Q02086 613 aa23.7■■□□□ 1.38
TRIM47-207ENST00000593089 GPNMBQ14956 572 aa23.7■■□□□ 1.38
TRIM47-207ENST00000593089 HSDL1Q3SXM5 330 aa23.7■■□□□ 1.38
TRIM47-207ENST00000593089 GPKOWQ92917 476 aaPredicted RBP eCLIP23.7■■□□□ 1.38
TRIM47-207ENST00000593089 MAP4K1Q92918 833 aa23.7■■□□□ 1.38
TRIM47-207ENST00000593089 KIF28PB7ZC32 967 aa23.69■■□□□ 1.38
TRIM47-207ENST00000593089 PPFIA4O75335 1185 aa23.69■■□□□ 1.38
TRIM47-207ENST00000593089 UBA1P22314 1058 aaKnown RBP23.69■■□□□ 1.38
TRIM47-207ENST00000593089 KCNJ6P48051 423 aa23.69■■□□□ 1.38
TRIM47-207ENST00000593089 ZNF200P98182 395 aaPredicted RBP23.69■■□□□ 1.38
TRIM47-207ENST00000593089 RBL2Q08999 1139 aa23.69■■□□□ 1.38
TRIM47-207ENST00000593089 MB21D2Q8IYB1 491 aaPredicted RBP23.69■■□□□ 1.38
TRIM47-207ENST00000593089 IGDCC4Q8TDY8 1250 aa23.69■■□□□ 1.38
TRIM47-207ENST00000593089 ATXN2LQ8WWM7 1075 aaKnown RBP23.69■■□□□ 1.38
TRIM47-207ENST00000593089 RBM8AQ9Y5S9 174 aaKnown RBP23.69■■□□□ 1.38
TRIM47-207ENST00000593089 CHD7Q9P2D1 2997 aa23.68■■□□□ 1.38
TRIM47-207ENST00000593089 HOXD8P13378 290 aaPredicted RBP23.68■■□□□ 1.38
TRIM47-207ENST00000593089 PTK7Q13308 1070 aa23.68■■□□□ 1.38
TRIM47-207ENST00000593089 MYL10Q9BUA6 226 aa23.68■■□□□ 1.38
TRIM47-207ENST00000593089 MLXIPQ9HAP2 919 aa23.68■■□□□ 1.38
TRIM47-207ENST00000593089 RBAK-RBAKDNI3L0D1 243 aa23.67■■□□□ 1.38
TRIM47-207ENST00000593089 NBNO60934 754 aa23.67■■□□□ 1.38
TRIM47-207ENST00000593089 ARHGEF15O94989 841 aa23.67■■□□□ 1.38
TRIM47-207ENST00000593089 TGFB3P10600 412 aa23.67■■□□□ 1.38
TRIM47-207ENST00000593089 WDR5P61964 334 aaKnown RBP23.67■■□□□ 1.38
TRIM47-207ENST00000593089 CNKSR3Q6P9H4 555 aa23.67■■□□□ 1.38
TRIM47-207ENST00000593089 TMCO2Q7Z6W1 182 aaPredicted RBP23.67■■□□□ 1.38
TRIM47-207ENST00000593089 WNT8BQ93098 351 aa23.67■■□□□ 1.38
TRIM47-207ENST00000593089 ASB2Q96Q27 587 aa23.67■■□□□ 1.38
TRIM47-207ENST00000593089 EPOPA6NHQ4 379 aa23.66■■□□□ 1.38
TRIM47-207ENST00000593089 TLL1O43897 1013 aa23.66■■□□□ 1.38
TRIM47-207ENST00000593089 PARNO95453 639 aaKnown RBP23.66■■□□□ 1.38
TRIM47-207ENST00000593089 TAP1Q03518 808 aa23.66■■□□□ 1.38
TRIM47-207ENST00000593089 HIC1Q14526 733 aa23.66■■□□□ 1.38
TRIM47-207ENST00000593089 ZNF618Q5T7W0 954 aa23.66■■□□□ 1.38
TRIM47-207ENST00000593089 ZNF654Q8IZM8 581 aa23.66■■□□□ 1.38
TRIM47-207ENST00000593089 CTCFLQ8NI51 663 aaPredicted RBP23.66■■□□□ 1.38
TRIM47-207ENST00000593089 ARNTL2Q8WYA1 636 aa23.66■■□□□ 1.38
TRIM47-207ENST00000593089 BCAS3Q9H6U6 928 aa23.66■■□□□ 1.38
TRIM47-207ENST00000593089 LY9Q9HBG7 655 aa23.66■■□□□ 1.38
TRIM47-207ENST00000593089 DOCK5Q9H7D0 1870 aa23.65■■□□□ 1.38
TRIM47-207ENST00000593089 CXCL10P02778 98 aa23.65■■□□□ 1.38
TRIM47-207ENST00000593089 DEFB103AP81534 67 aa23.65■■□□□ 1.38
TRIM47-207ENST00000593089 MRPS5P82675 430 aaKnown RBP23.65■■□□□ 1.38
TRIM47-207ENST00000593089 MRPS9P82933 396 aaKnown RBP23.65■■□□□ 1.38
TRIM47-207ENST00000593089 TCTN1Q2MV58 587 aa23.65■■□□□ 1.38
TRIM47-207ENST00000593089 TRIM71Q2Q1W2 868 aaKnown RBP23.65■■□□□ 1.38
TRIM47-207ENST00000593089 GNPTABQ3T906 1256 aa23.65■■□□□ 1.38
TRIM47-207ENST00000593089 CASC1Q6TDU7 716 aa23.65■■□□□ 1.38
TRIM47-207ENST00000593089 RRP36Q96EU6 259 aaKnown RBP23.65■■□□□ 1.38
TRIM47-207ENST00000593089 C16orf70Q9BSU1 422 aa23.65■■□□□ 1.38
TRIM47-207ENST00000593089 ZBED2Q9BTP6 218 aa23.65■■□□□ 1.38
TRIM47-207ENST00000593089 TSPYL2Q9H2G4 693 aaPredicted RBP23.65■■□□□ 1.38
TRIM47-207ENST00000593089 RTEL1Q9NZ71 1219 aa23.65■■□□□ 1.38
TRIM47-207ENST00000593089 PRC1O43663 620 aa23.64■■□□□ 1.37
TRIM47-207ENST00000593089 GTPBP6O43824 516 aaPredicted RBP23.64■■□□□ 1.37
TRIM47-207ENST00000593089 DDAH1O94760 285 aa23.64■■□□□ 1.37
TRIM47-207ENST00000593089 SMARCC2Q8TAQ2 1214 aa23.64■■□□□ 1.37
TRIM47-207ENST00000593089 MTCH2Q9Y6C9 303 aa23.64■■□□□ 1.37
TRIM47-207ENST00000593089 FRMPD4Q14CM0 1322 aa23.63■■□□□ 1.37
TRIM47-207ENST00000593089 NOP56O00567 594 aaKnown RBP23.63■■□□□ 1.37
TRIM47-207ENST00000593089 KIF5BP33176 963 aa23.63■■□□□ 1.37
TRIM47-207ENST00000593089 SKIV2LQ15477 1246 aaKnown RBP23.63■■□□□ 1.37
TRIM47-207ENST00000593089 TRAF7Q6Q0C0 670 aa23.63■■□□□ 1.37
TRIM47-207ENST00000593089 NFXL1Q6ZNB6 911 aa23.63■■□□□ 1.37
TRIM47-207ENST00000593089 SPRED2Q7Z698 418 aa23.63■■□□□ 1.37
TRIM47-207ENST00000593089 MAP3K14Q99558 947 aa23.63■■□□□ 1.37
TRIM47-207ENST00000593089 SPZ1Q9BXG8 430 aa23.63■■□□□ 1.37
TRIM47-207ENST00000593089 C17orf102A2RUQ5 167 aa23.62■■□□□ 1.37
TRIM47-207ENST00000593089 LCHNA4D1U4 455 aa23.62■■□□□ 1.37
TRIM47-207ENST00000593089 H3BRB1 525 aa23.62■■□□□ 1.37
TRIM47-207ENST00000593089 TNFRSF10AO00220 468 aa23.62■■□□□ 1.37
TRIM47-207ENST00000593089 STAM2O75886 525 aa23.62■■□□□ 1.37
TRIM47-207ENST00000593089 LGALS2P05162 132 aa23.62■■□□□ 1.37
TRIM47-207ENST00000593089 ICAM3P32942 547 aa23.62■■□□□ 1.37
TRIM47-207ENST00000593089 MBTPS1Q14703 1052 aa23.62■■□□□ 1.37
TRIM47-207ENST00000593089 KRT40Q6A162 431 aa23.62■■□□□ 1.37
TRIM47-207ENST00000593089 USP17L6PQ6QN14 398 aa23.62■■□□□ 1.37
TRIM47-207ENST00000593089 IL27Q8NEV9 243 aa23.62■■□□□ 1.37
TRIM47-207ENST00000593089 CUL5Q93034 780 aa23.62■■□□□ 1.37
TRIM47-207ENST00000593089 INPP4AQ96PE3 977 aaPredicted RBP23.62■■□□□ 1.37
TRIM47-207ENST00000593089 TUT1Q9H6E5 874 aaKnown RBP23.62■■□□□ 1.37
TRIM47-207ENST00000593089 SEC63Q9UGP8 760 aaKnown RBP23.62■■□□□ 1.37
TRIM47-207ENST00000593089 ABHD14A-ACY1A0A1B0GW23 586 aa23.61■■□□□ 1.37
TRIM47-207ENST00000593089 CCDC69A6NI79 296 aa23.61■■□□□ 1.37
TRIM47-207ENST00000593089 SPATA31C2B4DYI2 1134 aa23.61■■□□□ 1.37
TRIM47-207ENST00000593089 PLEKHA8P1O95397 391 aa23.61■■□□□ 1.37
TRIM47-207ENST00000593089 POU3F3P20264 500 aaPredicted RBP23.61■■□□□ 1.37
TRIM47-207ENST00000593089 THPOP40225 353 aa23.61■■□□□ 1.37
TRIM47-207ENST00000593089 SEMA3FQ13275 785 aa23.61■■□□□ 1.37
TRIM47-207ENST00000593089 IKBKEQ14164 716 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms