RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 ZNF792Q3KQV3 632 aa13.58□□□□□ -0.24
DDX39A-219ENST00000592927 C1orf53Q5VUE5 145 aa13.58□□□□□ -0.24
DDX39A-219ENST00000592927 TYW1BQ6NUM6 668 aa13.58□□□□□ -0.24
DDX39A-219ENST00000592927 SLC30A10Q6XR72 485 aa13.58□□□□□ -0.24
DDX39A-219ENST00000592927 CCDC148Q8NFR7 591 aa13.58□□□□□ -0.24
DDX39A-219ENST00000592927 AIFM3Q96NN9 605 aa13.58□□□□□ -0.24
DDX39A-219ENST00000592927 GLT8D2Q9H1C3 349 aa13.58□□□□□ -0.24
DDX39A-219ENST00000592927 C6orf50Q9HD87 102 aa13.58□□□□□ -0.24
DDX39A-219ENST00000592927 VPS54Q9P1Q0 977 aa13.58□□□□□ -0.24
DDX39A-219ENST00000592927 DIS3Q9Y2L1 958 aaKnown RBP13.58□□□□□ -0.24
DDX39A-219ENST00000592927 XIRP2A4UGR9 3374 aa13.58□□□□□ -0.24
DDX39A-219ENST00000592927 PIK3CDO00329 1044 aa13.57□□□□□ -0.24
DDX39A-219ENST00000592927 KIAA0355O15063 1070 aa13.57□□□□□ -0.24
DDX39A-219ENST00000592927 GNA11P29992 359 aa13.57□□□□□ -0.24
DDX39A-219ENST00000592927 HOXA13P31271 388 aaPredicted RBP13.57□□□□□ -0.24
DDX39A-219ENST00000592927 HSD17B4P51659 736 aa13.57□□□□□ -0.24
DDX39A-219ENST00000592927 NLRP5P59047 1200 aa13.57□□□□□ -0.24
DDX39A-219ENST00000592927 CNTN2Q02246 1040 aa13.57□□□□□ -0.24
DDX39A-219ENST00000592927 GHRHRQ02643 423 aa13.57□□□□□ -0.24
DDX39A-219ENST00000592927 RESTQ13127 1097 aa13.57□□□□□ -0.24
DDX39A-219ENST00000592927 FOXD4L5Q5VV16 416 aaPredicted RBP13.57□□□□□ -0.24
DDX39A-219ENST00000592927 ATL3Q6DD88 541 aa13.57□□□□□ -0.24
DDX39A-219ENST00000592927 BRAPQ7Z569 592 aa13.57□□□□□ -0.24
DDX39A-219ENST00000592927 TEX2Q8IWB9 1127 aa13.57□□□□□ -0.24
DDX39A-219ENST00000592927 FAM133AQ8N9E0 248 aa13.57□□□□□ -0.24
DDX39A-219ENST00000592927 NPLOC4Q8TAT6 608 aa13.57□□□□□ -0.24
DDX39A-219ENST00000592927 SYTL5Q8TDW5 730 aaPredicted RBP13.57□□□□□ -0.24
DDX39A-219ENST00000592927 FOXD4L4Q8WXT5 416 aaPredicted RBP13.57□□□□□ -0.24
DDX39A-219ENST00000592927 KHSRPQ92945 711 aaKnown RBP eCLIP13.57□□□□□ -0.24
DDX39A-219ENST00000592927 RIC8AQ9NPQ8 531 aa13.57□□□□□ -0.24
DDX39A-219ENST00000592927 ADD3Q9UEY8 706 aaKnown RBP13.57□□□□□ -0.24
DDX39A-219ENST00000592927 ESYT2A0FGR8 921 aa13.56□□□□□ -0.24
DDX39A-219ENST00000592927 SAFBQ15424 915 aaKnown RBP eCLIP13.56□□□□□ -0.24
DDX39A-219ENST00000592927 CSPP1Q1MSJ5 1256 aa13.56□□□□□ -0.24
DDX39A-219ENST00000592927 KRT40Q6A162 431 aa13.56□□□□□ -0.24
DDX39A-219ENST00000592927 USP17L6PQ6QN14 398 aa13.56□□□□□ -0.24
DDX39A-219ENST00000592927 FCHSD1Q86WN1 690 aa13.56□□□□□ -0.24
DDX39A-219ENST00000592927 MICALL1Q8N3F8 863 aa13.56□□□□□ -0.24
DDX39A-219ENST00000592927 BICD2Q8TD16 824 aa13.56□□□□□ -0.24
DDX39A-219ENST00000592927 MAML3Q96JK9 1138 aa13.56□□□□□ -0.24
DDX39A-219ENST00000592927 PURBQ96QR8 312 aaKnown RBP13.56□□□□□ -0.24
DDX39A-219ENST00000592927 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.56□□□□□ -0.242e-12■■□□□ 11.7
DDX39A-219ENST00000592927 ZMYND12Q9H0C1 365 aa13.56□□□□□ -0.24
DDX39A-219ENST00000592927 SOWAHBA6NEL2 793 aa13.55□□□□□ -0.24
DDX39A-219ENST00000592927 B4DLN1 442 aa13.55□□□□□ -0.24
DDX39A-219ENST00000592927 MEIS2O14770 477 aa13.55□□□□□ -0.24
DDX39A-219ENST00000592927 CYBAP13498 195 aa13.55□□□□□ -0.24
DDX39A-219ENST00000592927 FOSBP53539 338 aa13.55□□□□□ -0.24
DDX39A-219ENST00000592927 UBE2SQ16763 222 aa13.55□□□□□ -0.24
DDX39A-219ENST00000592927 ARHGEF16Q5VV41 709 aa13.55□□□□□ -0.24
DDX39A-219ENST00000592927 OLFML2BQ68BL8 750 aa13.55□□□□□ -0.24
DDX39A-219ENST00000592927 MCTP1Q6DN14 999 aa13.55□□□□□ -0.24
DDX39A-219ENST00000592927 GALNT17Q6IS24 598 aa13.55□□□□□ -0.24
DDX39A-219ENST00000592927 ZNF467Q7Z7K2 595 aaPredicted RBP13.55□□□□□ -0.24
DDX39A-219ENST00000592927 DNERQ8NFT8 737 aa13.55□□□□□ -0.24
DDX39A-219ENST00000592927 NSUN6Q8TEA1 469 aaKnown RBP13.55□□□□□ -0.24
DDX39A-219ENST00000592927 TAAR1Q96RJ0 339 aa13.55□□□□□ -0.24
DDX39A-219ENST00000592927 RMDN3Q96TC7 470 aa13.55□□□□□ -0.24
DDX39A-219ENST00000592927 MPHOSPH6Q99547 160 aaKnown RBP13.55□□□□□ -0.24
DDX39A-219ENST00000592927 TMEM39AQ9NV64 488 aa13.55□□□□□ -0.24
DDX39A-219ENST00000592927 COL20A1Q9P218 1284 aa13.55□□□□□ -0.24
DDX39A-219ENST00000592927 NCOR1O75376 2440 aa13.55□□□□□ -0.24
DDX39A-219ENST00000592927 ZNF236Q9UL36 1845 aa13.55□□□□□ -0.24
DDX39A-219ENST00000592927 ASB14A6NK59 587 aa13.54□□□□□ -0.24
DDX39A-219ENST00000592927 SPDYE3A6NKU9 549 aa13.54□□□□□ -0.24
DDX39A-219ENST00000592927 MMP1P03956 469 aa13.54□□□□□ -0.24
DDX39A-219ENST00000592927 ALDH5A1P51649 535 aaPredicted RBP13.54□□□□□ -0.24
DDX39A-219ENST00000592927 KRT85P78386 507 aa13.54□□□□□ -0.24
DDX39A-219ENST00000592927 GUCY1B3Q02153 619 aa13.54□□□□□ -0.24
DDX39A-219ENST00000592927 LRRC41Q15345 812 aa13.54□□□□□ -0.24
DDX39A-219ENST00000592927 SKIV2LQ15477 1246 aaKnown RBP13.54□□□□□ -0.24
DDX39A-219ENST00000592927 FERMT3Q86UX7 667 aa13.54□□□□□ -0.24
DDX39A-219ENST00000592927 REXO1Q8N1G1 1221 aaKnown RBP13.54□□□□□ -0.24
DDX39A-219ENST00000592927 MSL3Q8N5Y2 521 aaKnown RBP13.54□□□□□ -0.24
DDX39A-219ENST00000592927 FGD4Q96M96 766 aa13.54□□□□□ -0.24
DDX39A-219ENST00000592927 ZNF396Q96N95 335 aaPredicted RBP13.54□□□□□ -0.24
DDX39A-219ENST00000592927 TINF2Q9BSI4 451 aa13.54□□□□□ -0.24
DDX39A-219ENST00000592927 BRMS1Q9HCU9 246 aa13.54□□□□□ -0.24
DDX39A-219ENST00000592927 PCDHA4Q9UN74 947 aa13.54□□□□□ -0.24
DDX39A-219ENST00000592927 KCNJ14Q9UNX9 436 aa13.54□□□□□ -0.24
DDX39A-219ENST00000592927 SMCHD1A6NHR9 2005 aa13.54□□□□□ -0.24
DDX39A-219ENST00000592927 LOC102724159A0A0B4J2E5 919 aa13.53□□□□□ -0.24
DDX39A-219ENST00000592927 PQBP1O60828 265 aaKnown RBP13.53□□□□□ -0.24
DDX39A-219ENST00000592927 FOSP01100 380 aaPredicted RBP13.53□□□□□ -0.24
DDX39A-219ENST00000592927 EIF2AK2P19525 551 aaKnown RBP13.53□□□□□ -0.24
DDX39A-219ENST00000592927 U2AF2P26368 475 aaKnown RBP eCLIP13.53□□□□□ -0.244e-9■□□□□ 9.1
DDX39A-219ENST00000592927 GNL2Q13823 731 aaKnown RBP13.53□□□□□ -0.24
DDX39A-219ENST00000592927 PWP2Q15269 919 aaKnown RBP13.53□□□□□ -0.24
DDX39A-219ENST00000592927 SKOR2Q2VWA4 1001 aaPredicted RBP13.53□□□□□ -0.24
DDX39A-219ENST00000592927 MCTP2Q6DN12 878 aa13.53□□□□□ -0.24
DDX39A-219ENST00000592927 MAMDC4Q6UXC1 1216 aa13.53□□□□□ -0.24
DDX39A-219ENST00000592927 BLIDQ8IZY5 108 aa13.53□□□□□ -0.24
DDX39A-219ENST00000592927 TMEM87AQ8NBN3 555 aa13.53□□□□□ -0.24
DDX39A-219ENST00000592927 PHF20Q9BVI0 1012 aa13.53□□□□□ -0.24
DDX39A-219ENST00000592927 FOXP1Q9H334 677 aaPredicted RBP13.53□□□□□ -0.24
DDX39A-219ENST00000592927 EHMT1Q9H9B1 1298 aa13.53□□□□□ -0.24
DDX39A-219ENST00000592927 PXMP2Q9NR77 195 aa13.53□□□□□ -0.24
DDX39A-219ENST00000592927 GJB4Q9NTQ9 266 aa13.53□□□□□ -0.24
DDX39A-219ENST00000592927 MSRAQ9UJ68 235 aa13.53□□□□□ -0.24
DDX39A-219ENST00000592927 CFAP45Q9UL16 551 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms