RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-240ENST00000592815 MLXIPQ9HAP2 919 aa18.58■□□□□ 0.56
CIRBP-240ENST00000592815 ANO2Q9NQ90 1003 aa18.58■□□□□ 0.56
CIRBP-240ENST00000592815 GTF2IRD1Q9UHL9 959 aa18.58■□□□□ 0.56
CIRBP-240ENST00000592815 UBA1P22314 1058 aaKnown RBP18.57■□□□□ 0.56
CIRBP-240ENST00000592815 SMARCA1P28370 1054 aa18.57■□□□□ 0.56
CIRBP-240ENST00000592815 GNAQP50148 359 aa18.57■□□□□ 0.56
CIRBP-240ENST00000592815 HSDL1Q3SXM5 330 aa18.57■□□□□ 0.56
CIRBP-240ENST00000592815 CAGE1Q8TC20 777 aa18.57■□□□□ 0.56
CIRBP-240ENST00000592815 COL25A1Q9BXS0 654 aaPredicted RBP18.57■□□□□ 0.56
CIRBP-240ENST00000592815 SEC63Q9UGP8 760 aaKnown RBP18.57■□□□□ 0.56
CIRBP-240ENST00000592815 PCDHA11Q9Y5I1 949 aa18.57■□□□□ 0.56
CIRBP-240ENST00000592815 HAS3O00219 553 aa18.56■□□□□ 0.56
CIRBP-240ENST00000592815 PLEKHA8P1O95397 391 aa18.56■□□□□ 0.56
CIRBP-240ENST00000592815 F2P00734 622 aa18.56■□□□□ 0.56
CIRBP-240ENST00000592815 HOXD8P13378 290 aaPredicted RBP18.56■□□□□ 0.56
CIRBP-240ENST00000592815 SELPP16109 830 aa18.56■□□□□ 0.56
CIRBP-240ENST00000592815 RXRAP19793 462 aa18.56■□□□□ 0.56
CIRBP-240ENST00000592815 LIFRP42702 1097 aa18.56■□□□□ 0.56
CIRBP-240ENST00000592815 MRPS9P82933 396 aaKnown RBP18.56■□□□□ 0.56
CIRBP-240ENST00000592815 USP17L6PQ6QN14 398 aa18.56■□□□□ 0.56
CIRBP-240ENST00000592815 RAB11FIP4Q86YS3 637 aa18.56■□□□□ 0.56
CIRBP-240ENST00000592815 CMTR1Q8N1G2 835 aaKnown RBP18.56■□□□□ 0.56
CIRBP-240ENST00000592815 SRBD1Q8N5C6 995 aaKnown RBP18.56■□□□□ 0.56
CIRBP-240ENST00000592815 SMARCC2Q8TAQ2 1214 aa18.56■□□□□ 0.56
CIRBP-240ENST00000592815 AFAP1L1Q8TED9 768 aa18.56■□□□□ 0.56
CIRBP-240ENST00000592815 PPM1EQ8WY54 764 aa18.56■□□□□ 0.56
CIRBP-240ENST00000592815 DHX38Q92620 1227 aaKnown RBP18.56■□□□□ 0.56
CIRBP-240ENST00000592815 CUL5Q93034 780 aa18.56■□□□□ 0.56
CIRBP-240ENST00000592815 LRRC2Q9BYS8 371 aa18.56■□□□□ 0.56
CIRBP-240ENST00000592815 BCAS3Q9H6U6 928 aa18.56■□□□□ 0.56
CIRBP-240ENST00000592815 RTEL1Q9NZ71 1219 aa18.56■□□□□ 0.56
CIRBP-240ENST00000592815 EYSQ5T1H1 3165 aa18.56■□□□□ 0.56
CIRBP-240ENST00000592815 ZNF200P98182 395 aaPredicted RBP18.55■□□□□ 0.56
CIRBP-240ENST00000592815 GNPTABQ3T906 1256 aa18.55■□□□□ 0.56
CIRBP-240ENST00000592815 BMP2KLQ5H9B9 411 aa18.55■□□□□ 0.56
CIRBP-240ENST00000592815 CENPQQ7L2Z9 268 aaPredicted RBP18.55■□□□□ 0.56
CIRBP-240ENST00000592815 USP38Q8NB14 1042 aa18.55■□□□□ 0.56
CIRBP-240ENST00000592815 SLC12A7Q9Y666 1083 aa18.55■□□□□ 0.56
CIRBP-240ENST00000592815 KIAA1217Q5T5P2 1943 aa18.55■□□□□ 0.56
CIRBP-240ENST00000592815 PRUNE2Q8WUY3 3088 aa18.54■□□□□ 0.56
CIRBP-240ENST00000592815 CHD9Q3L8U1 2897 aa18.54■□□□□ 0.56
CIRBP-240ENST00000592815 SPATA31C2B4DYI2 1134 aa18.54■□□□□ 0.56
CIRBP-240ENST00000592815 STAM2O75886 525 aa18.54■□□□□ 0.56
CIRBP-240ENST00000592815 CALM1P0DP23 149 aa18.54■□□□□ 0.56
CIRBP-240ENST00000592815 CALM2P0DP24 149 aa18.54■□□□□ 0.56
CIRBP-240ENST00000592815 CALM3P0DP25 149 aa18.54■□□□□ 0.56
CIRBP-240ENST00000592815 CKBP12277 381 aa18.54■□□□□ 0.56
CIRBP-240ENST00000592815 IGFBP4P22692 258 aa18.54■□□□□ 0.56
CIRBP-240ENST00000592815 ADGRE1Q14246 886 aa18.54■□□□□ 0.56
CIRBP-240ENST00000592815 GPNMBQ14956 572 aa18.54■□□□□ 0.56
CIRBP-240ENST00000592815 PPP2R2DQ66LE6 453 aa18.54■□□□□ 0.56
CIRBP-240ENST00000592815 LRRC8DQ7L1W4 858 aa18.54■□□□□ 0.56
CIRBP-240ENST00000592815 CCDC82Q8N4S0 544 aa18.54■□□□□ 0.56
CIRBP-240ENST00000592815 C16orf70Q9BSU1 422 aa18.54■□□□□ 0.56
CIRBP-240ENST00000592815 FRMPD4Q14CM0 1322 aa18.53■□□□□ 0.56
CIRBP-240ENST00000592815 hCG_1642624A0A1W2PR95 340 aa18.53■□□□□ 0.56
CIRBP-240ENST00000592815 MEIS2O14770 477 aa18.53■□□□□ 0.56
CIRBP-240ENST00000592815 ICAM3P32942 547 aa18.53■□□□□ 0.56
CIRBP-240ENST00000592815 PTK7Q13308 1070 aa18.53■□□□□ 0.56
CIRBP-240ENST00000592815 MYO9BQ13459 2157 aa18.53■□□□□ 0.56
CIRBP-240ENST00000592815 NEDD9Q14511 834 aa18.53■□□□□ 0.56
CIRBP-240ENST00000592815 RNF20Q5VTR2 975 aa18.53■□□□□ 0.56
CIRBP-240ENST00000592815 CYFIP1Q7L576 1253 aa18.53■□□□□ 0.56
CIRBP-240ENST00000592815 FANCBQ8NB91 859 aa18.53■□□□□ 0.56
CIRBP-240ENST00000592815 PHOSPHO2Q8TCD6 241 aa18.53■□□□□ 0.56
CIRBP-240ENST00000592815 INPP4AQ96PE3 977 aaPredicted RBP18.53■□□□□ 0.56
CIRBP-240ENST00000592815 SLC9A7Q96T83 725 aa18.53■□□□□ 0.56
CIRBP-240ENST00000592815 PSTPIP2Q9H939 334 aa18.53■□□□□ 0.56
CIRBP-240ENST00000592815 H3BRB1 525 aa18.52■□□□□ 0.56
CIRBP-240ENST00000592815 PIK3CDO00329 1044 aa18.52■□□□□ 0.56
CIRBP-240ENST00000592815 NOP56O00567 594 aaKnown RBP18.52■□□□□ 0.56
CIRBP-240ENST00000592815 RBL2Q08999 1139 aa18.52■□□□□ 0.56
CIRBP-240ENST00000592815 SEMA3FQ13275 785 aa18.52■□□□□ 0.56
CIRBP-240ENST00000592815 HIC1Q14526 733 aa18.52■□□□□ 0.56
CIRBP-240ENST00000592815 CCDC85BQ15834 202 aaPredicted RBP18.52■□□□□ 0.56
CIRBP-240ENST00000592815 TUT1Q9H6E5 874 aaKnown RBP18.52■□□□□ 0.56
CIRBP-240ENST00000592815 SCN5AQ14524 2016 aa18.52■□□□□ 0.55
CIRBP-240ENST00000592815 KIF28PB7ZC32 967 aa18.51■□□□□ 0.55
CIRBP-240ENST00000592815 FIBPO43427 364 aa18.51■□□□□ 0.55
CIRBP-240ENST00000592815 NBNO60934 754 aa18.51■□□□□ 0.55
CIRBP-240ENST00000592815 BAIAP3O94812 1187 aa18.51■□□□□ 0.55
CIRBP-240ENST00000592815 PARNO95453 639 aaKnown RBP18.51■□□□□ 0.55
CIRBP-240ENST00000592815 CA3P07451 260 aa18.51■□□□□ 0.55
CIRBP-240ENST00000592815 TRIM71Q2Q1W2 868 aaKnown RBP18.51■□□□□ 0.55
CIRBP-240ENST00000592815 ZNF618Q5T7W0 954 aa18.51■□□□□ 0.55
CIRBP-240ENST00000592815 PCNX4Q63HM2 1172 aa18.51■□□□□ 0.55
CIRBP-240ENST00000592815 XRRA1Q6P2D8 792 aa18.51■□□□□ 0.55
CIRBP-240ENST00000592815 SYNE3Q6ZMZ3 975 aa18.51■□□□□ 0.55
CIRBP-240ENST00000592815 HERC6Q8IVU3 1022 aa18.51■□□□□ 0.55
CIRBP-240ENST00000592815 WNT8BQ93098 351 aa18.51■□□□□ 0.55
CIRBP-240ENST00000592815 NEK1Q96PY6 1258 aa18.51■□□□□ 0.55
CIRBP-240ENST00000592815 PRDM6Q9NQX0 595 aa18.51■□□□□ 0.55
CIRBP-240ENST00000592815 C17orf102A2RUQ5 167 aa18.5■□□□□ 0.55
CIRBP-240ENST00000592815 CXCL10P02778 98 aa18.5■□□□□ 0.55
CIRBP-240ENST00000592815 LGALS2P05162 132 aa18.5■□□□□ 0.55
CIRBP-240ENST00000592815 KCNJ6P48051 423 aa18.5■□□□□ 0.55
CIRBP-240ENST00000592815 METTL7BQ6UX53 244 aa18.5■□□□□ 0.55
CIRBP-240ENST00000592815 TMTC3Q6ZXV5 915 aa18.5■□□□□ 0.55
CIRBP-240ENST00000592815 NLRX1Q86UT6 975 aa18.5■□□□□ 0.55
CIRBP-240ENST00000592815 SGMS1Q86VZ5 419 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms