RNA–Protein interactions for RNA: ENST00000592083.5

ERCC1-214, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-214ENST00000592083 ACTN1P12814 892 aa17.38■□□□□ 0.37
ERCC1-214ENST00000592083 RXRAP19793 462 aa17.38■□□□□ 0.37
ERCC1-214ENST00000592083 HSD17B4P51659 736 aa17.38■□□□□ 0.37
ERCC1-214ENST00000592083 TMCO2Q7Z6W1 182 aaPredicted RBP17.38■□□□□ 0.37
ERCC1-214ENST00000592083 SLC9A7Q96T83 725 aa17.38■□□□□ 0.37
ERCC1-214ENST00000592083 MAF1Q9H063 256 aa17.38■□□□□ 0.37
ERCC1-214ENST00000592083 PXMP2Q9NR77 195 aa17.38■□□□□ 0.37
ERCC1-214ENST00000592083 PNMA6FA0A0J9YX94 578 aa17.37■□□□□ 0.37
ERCC1-214ENST00000592083 NKRFO15226 690 aaKnown RBP eCLIP17.37■□□□□ 0.37
ERCC1-214ENST00000592083 CDC45O75419 566 aa17.37■□□□□ 0.37
ERCC1-214ENST00000592083 NR3C2P08235 984 aa17.37■□□□□ 0.37
ERCC1-214ENST00000592083 CPT1AP50416 773 aa17.37■□□□□ 0.37
ERCC1-214ENST00000592083 STXBP2Q15833 593 aa17.37■□□□□ 0.37
ERCC1-214ENST00000592083 LY6KQ17RY6 165 aa17.37■□□□□ 0.37
ERCC1-214ENST00000592083 CCDC62Q6P9F0 684 aa17.37■□□□□ 0.37
ERCC1-214ENST00000592083 RETREG2Q8NC44 543 aa17.37■□□□□ 0.37
ERCC1-214ENST00000592083 CTCFLQ8NI51 663 aaPredicted RBP17.37■□□□□ 0.37
ERCC1-214ENST00000592083 PHOSPHO2Q8TCD6 241 aa17.37■□□□□ 0.37
ERCC1-214ENST00000592083 ZFP91Q96JP5 570 aaPredicted RBP17.37■□□□□ 0.37
ERCC1-214ENST00000592083 IWS1Q96ST2 819 aa17.37■□□□□ 0.37
ERCC1-214ENST00000592083 POLR3EQ9NVU0 708 aa17.37■□□□□ 0.37
ERCC1-214ENST00000592083 BRWD1Q9NSI6 2320 aa17.36■□□□□ 0.37
ERCC1-214ENST00000592083 LCHNA4D1U4 455 aa17.36■□□□□ 0.37
ERCC1-214ENST00000592083 CCDC69A6NI79 296 aa17.36■□□□□ 0.37
ERCC1-214ENST00000592083 KIF28PB7ZC32 967 aa17.36■□□□□ 0.37
ERCC1-214ENST00000592083 DDAH1O94760 285 aa17.36■□□□□ 0.37
ERCC1-214ENST00000592083 MYCLP12524 364 aaPredicted RBP17.36■□□□□ 0.37
ERCC1-214ENST00000592083 ALYREFQ86V81 257 aaKnown RBP17.36■□□□□ 0.37
ERCC1-214ENST00000592083 FCHSD1Q86WN1 690 aa17.36■□□□□ 0.37
ERCC1-214ENST00000592083 CMTR1Q8N1G2 835 aaKnown RBP17.36■□□□□ 0.37
ERCC1-214ENST00000592083 TMEM87BQ96K49 555 aa17.36■□□□□ 0.37
ERCC1-214ENST00000592083 MTG1Q9BT17 334 aaPredicted RBP17.36■□□□□ 0.37
ERCC1-214ENST00000592083 KIAA1217Q5T5P2 1943 aa17.36■□□□□ 0.37
ERCC1-214ENST00000592083 SCN10AQ9Y5Y9 1956 aa17.35■□□□□ 0.37
ERCC1-214ENST00000592083 A6NJR5 290 aa17.35■□□□□ 0.37
ERCC1-214ENST00000592083 PI4K2BG5E9Z4 385 aa17.35■□□□□ 0.37
ERCC1-214ENST00000592083 GCOM1H8Y6P7 765 aaPredicted RBP17.35■□□□□ 0.37
ERCC1-214ENST00000592083 EIF3JO75822 258 aaKnown RBP17.35■□□□□ 0.37
ERCC1-214ENST00000592083 PLEKHA8P1O95397 391 aa17.35■□□□□ 0.37
ERCC1-214ENST00000592083 POLR2MP0CAP2 368 aa17.35■□□□□ 0.37
ERCC1-214ENST00000592083 CHMP4BP1P59074 171 aa17.35■□□□□ 0.37
ERCC1-214ENST00000592083 GHRHRQ02643 423 aa17.35■□□□□ 0.37
ERCC1-214ENST00000592083 BRDTQ58F21 947 aaPredicted RBP17.35■□□□□ 0.37
ERCC1-214ENST00000592083 IL31RAQ8NI17 732 aa17.35■□□□□ 0.37
ERCC1-214ENST00000592083 AFG1LQ8WV93 481 aa17.35■□□□□ 0.37
ERCC1-214ENST00000592083 TCEANC2Q96MN5 208 aa17.35■□□□□ 0.37
ERCC1-214ENST00000592083 PDCD2LQ9BRP1 358 aa17.35■□□□□ 0.37
ERCC1-214ENST00000592083 SORBS3O60504 671 aa17.34■□□□□ 0.37
ERCC1-214ENST00000592083 GH1P01241 217 aa17.34■□□□□ 0.37
ERCC1-214ENST00000592083 KIF5BP33176 963 aa17.34■□□□□ 0.37
ERCC1-214ENST00000592083 RFC2P35250 354 aa17.34■□□□□ 0.37
ERCC1-214ENST00000592083 ARHGAP1Q07960 439 aa17.34■□□□□ 0.37
ERCC1-214ENST00000592083 GPNMBQ14956 572 aa17.34■□□□□ 0.37
ERCC1-214ENST00000592083 RASEFQ8IZ41 740 aa17.34■□□□□ 0.37
ERCC1-214ENST00000592083 TMTC2Q8N394 836 aa17.34■□□□□ 0.37
ERCC1-214ENST00000592083 SRBD1Q8N5C6 995 aaKnown RBP17.34■□□□□ 0.37
ERCC1-214ENST00000592083 RRP36Q96EU6 259 aaKnown RBP17.34■□□□□ 0.37
ERCC1-214ENST00000592083 MAP3K14Q99558 947 aa17.34■□□□□ 0.37
ERCC1-214ENST00000592083 MTA3Q9BTC8 594 aa17.34■□□□□ 0.37
ERCC1-214ENST00000592083 hCG_1642624A0A1W2PR95 340 aa17.33■□□□□ 0.36
ERCC1-214ENST00000592083 LIFRP42702 1097 aa17.33■□□□□ 0.36
ERCC1-214ENST00000592083 TRAF1Q13077 416 aa17.33■□□□□ 0.36
ERCC1-214ENST00000592083 PGM5Q15124 567 aa17.33■□□□□ 0.36
ERCC1-214ENST00000592083 RNF20Q5VTR2 975 aa17.33■□□□□ 0.36
ERCC1-214ENST00000592083 CCDC82Q8N4S0 544 aa17.33■□□□□ 0.36
ERCC1-214ENST00000592083 GDPD5Q8WTR4 605 aa17.33■□□□□ 0.36
ERCC1-214ENST00000592083 NEK1Q96PY6 1258 aa17.33■□□□□ 0.36
ERCC1-214ENST00000592083 SPZ1Q9BXG8 430 aa17.33■□□□□ 0.36
ERCC1-214ENST00000592083 MAP3K20Q9NYL2 800 aaKnown RBP17.33■□□□□ 0.36
ERCC1-214ENST00000592083 DDX41Q9UJV9 622 aaKnown RBP17.33■□□□□ 0.36
ERCC1-214ENST00000592083 MTUS1Q9ULD2 1270 aa17.33■□□□□ 0.36
ERCC1-214ENST00000592083 SLC12A7Q9Y666 1083 aa17.33■□□□□ 0.36
ERCC1-214ENST00000592083 MRVI1Q9Y6F6 885 aa17.33■□□□□ 0.36
ERCC1-214ENST00000592083 COL4A4P53420 1690 aaPredicted RBP17.32■□□□□ 0.36
ERCC1-214ENST00000592083 PITPNM1O00562 1244 aa17.32■□□□□ 0.36
ERCC1-214ENST00000592083 KPNA6O60684 536 aa17.32■□□□□ 0.36
ERCC1-214ENST00000592083 RGS20O76081 388 aa17.32■□□□□ 0.36
ERCC1-214ENST00000592083 MMP3P08254 477 aa17.32■□□□□ 0.36
ERCC1-214ENST00000592083 ADCK5Q3MIX3 580 aa17.32■□□□□ 0.36
ERCC1-214ENST00000592083 VSIG10LQ86VR7 867 aa17.32■□□□□ 0.36
ERCC1-214ENST00000592083 ZBED2Q9BTP6 218 aa17.32■□□□□ 0.36
ERCC1-214ENST00000592083 MUC6Q6W4X9 2439 aa17.32■□□□□ 0.36
ERCC1-214ENST00000592083 MYH7BA7E2Y1 1941 aa17.31■□□□□ 0.36
ERCC1-214ENST00000592083 KCNJ6P48051 423 aa17.31■□□□□ 0.36
ERCC1-214ENST00000592083 GNAQP50148 359 aa17.31■□□□□ 0.36
ERCC1-214ENST00000592083 WDR5P61964 334 aaKnown RBP17.31■□□□□ 0.36
ERCC1-214ENST00000592083 DEFB103AP81534 67 aa17.31■□□□□ 0.36
ERCC1-214ENST00000592083 TCTN1Q2MV58 587 aa17.31■□□□□ 0.36
ERCC1-214ENST00000592083 NFRKBQ6P4R8 1299 aa17.31■□□□□ 0.36
ERCC1-214ENST00000592083 MICU3Q86XE3 530 aa17.31■□□□□ 0.36
ERCC1-214ENST00000592083 SAMD3Q8N6K7 520 aa17.31■□□□□ 0.36
ERCC1-214ENST00000592083 GPKOWQ92917 476 aaPredicted RBP eCLIP17.31■□□□□ 0.36
ERCC1-214ENST00000592083 LZTS2Q9BRK4 669 aa17.31■□□□□ 0.36
ERCC1-214ENST00000592083 SUGCTQ9HAC7 445 aa17.31■□□□□ 0.36
ERCC1-214ENST00000592083 SEC63Q9UGP8 760 aaKnown RBP17.31■□□□□ 0.36
ERCC1-214ENST00000592083 TANC1Q9C0D5 1861 aa17.31■□□□□ 0.36
ERCC1-214ENST00000592083 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.3■□□□□ 0.36
ERCC1-214ENST00000592083 CALM1P0DP23 149 aa17.3■□□□□ 0.36
ERCC1-214ENST00000592083 CALM2P0DP24 149 aa17.3■□□□□ 0.36
ERCC1-214ENST00000592083 CALM3P0DP25 149 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms