RNA–Protein interactions for RNA: ENST00000591475.5

VPS4B-206, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 1 (best)

Gene VPS4B, Length 2,008 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-206ENST00000591475 FCER1AP12319 257 aa12.01□□□□□ -0.49
VPS4B-206ENST00000591475 KIF11P52732 1056 aa12.01□□□□□ -0.49
VPS4B-206ENST00000591475 MAPK8IP2Q13387 824 aaPredicted RBP12.01□□□□□ -0.49
VPS4B-206ENST00000591475 GRIK5Q16478 980 aa12.01□□□□□ -0.49
VPS4B-206ENST00000591475 CCDC181Q5TID7 509 aa12.01□□□□□ -0.49
VPS4B-206ENST00000591475 C12orf60Q5U649 245 aa12.01□□□□□ -0.49
VPS4B-206ENST00000591475 GBP6Q6ZN66 633 aa12.01□□□□□ -0.49
VPS4B-206ENST00000591475 CERS3Q8IU89 383 aa12.01□□□□□ -0.49
VPS4B-206ENST00000591475 EFCAB13Q8IY85 973 aa12.01□□□□□ -0.49
VPS4B-206ENST00000591475 SMCR8Q8TEV9 937 aaPredicted RBP12.01□□□□□ -0.49
VPS4B-206ENST00000591475 SYT17Q9BSW7 474 aa12.01□□□□□ -0.49
VPS4B-206ENST00000591475 LRRC1Q9BTT6 524 aa12.01□□□□□ -0.49
VPS4B-206ENST00000591475 DEF6Q9H4E7 631 aa12.01□□□□□ -0.49
VPS4B-206ENST00000591475 ARHGAP20Q9P2F6 1191 aa12.01□□□□□ -0.49
VPS4B-206ENST00000591475 CAPN6Q9Y6Q1 641 aa12.01□□□□□ -0.49
VPS4B-206ENST00000591475 NFKBIEO00221 500 aa12.01□□□□□ -0.49
VPS4B-206ENST00000591475 CCNT1O60563 726 aaKnown RBP12.01□□□□□ -0.49
VPS4B-206ENST00000591475 MOCS3O95396 460 aa12.01□□□□□ -0.49
VPS4B-206ENST00000591475 FGFR1OPO95684 399 aaKnown RBP12.01□□□□□ -0.49
VPS4B-206ENST00000591475 PLEKP08567 350 aaPredicted RBP12.01□□□□□ -0.49
VPS4B-206ENST00000591475 EIF4A3P38919 411 aaKnown RBP12.01□□□□□ -0.49
VPS4B-206ENST00000591475 NOP2P46087 812 aaKnown RBP12.01□□□□□ -0.49
VPS4B-206ENST00000591475 EPHB4P54760 987 aa12.01□□□□□ -0.49
VPS4B-206ENST00000591475 NONOQ15233 471 aaKnown RBP eCLIP12.01□□□□□ -0.49
VPS4B-206ENST00000591475 SLC4A8Q2Y0W8 1093 aa12.01□□□□□ -0.49
VPS4B-206ENST00000591475 DACT2Q5SW24 774 aa12.01□□□□□ -0.49
VPS4B-206ENST00000591475 CENPPQ6IPU0 288 aa12.01□□□□□ -0.49
VPS4B-206ENST00000591475 CERS5Q8N5B7 392 aa12.01□□□□□ -0.49
VPS4B-206ENST00000591475 SPATA4Q8NEY3 305 aa12.01□□□□□ -0.49
VPS4B-206ENST00000591475 CALML4Q96GE6 196 aa12.01□□□□□ -0.49
VPS4B-206ENST00000591475 FAM163AQ96GL9 167 aaPredicted RBP12.01□□□□□ -0.49
VPS4B-206ENST00000591475 OSBPL9Q96SU4 736 aa12.01□□□□□ -0.49
VPS4B-206ENST00000591475 SEMA6BQ9H3T3 888 aa12.01□□□□□ -0.49
VPS4B-206ENST00000591475 MLXIPQ9HAP2 919 aa12.01□□□□□ -0.49
VPS4B-206ENST00000591475 MKNK2Q9HBH9 465 aa12.01□□□□□ -0.49
VPS4B-206ENST00000591475 KCNQ5Q9NR82 932 aa12.01□□□□□ -0.49
VPS4B-206ENST00000591475 SIK3Q9Y2K2 1263 aa12.01□□□□□ -0.49
VPS4B-206ENST00000591475 ABCB11O95342 1321 aa12□□□□□ -0.49
VPS4B-206ENST00000591475 PALM3A6NDB9 673 aaPredicted RBP12□□□□□ -0.49
VPS4B-206ENST00000591475 CYTH3O43739 400 aa12□□□□□ -0.49
VPS4B-206ENST00000591475 AKR1B10O60218 316 aa12□□□□□ -0.49
VPS4B-206ENST00000591475 TSPY3P0CV98 308 aa12□□□□□ -0.49
VPS4B-206ENST00000591475 TSPY8P0CW00 308 aa12□□□□□ -0.49
VPS4B-206ENST00000591475 IRAK1P51617 712 aa12□□□□□ -0.49
VPS4B-206ENST00000591475 DIXDC1Q155Q3 683 aa12□□□□□ -0.49
VPS4B-206ENST00000591475 MAN2A1Q16706 1144 aa12□□□□□ -0.49
VPS4B-206ENST00000591475 SLC35G1Q2M3R5 365 aa12□□□□□ -0.49
VPS4B-206ENST00000591475 LETM2Q2VYF4 491 aa12□□□□□ -0.49
VPS4B-206ENST00000591475 CCDC84Q86UT8 332 aaPredicted RBP12□□□□□ -0.49
VPS4B-206ENST00000591475 NIM1KQ8IY84 436 aa12□□□□□ -0.49
VPS4B-206ENST00000591475 KIAA0895Q8NCT3 520 aa12□□□□□ -0.49
VPS4B-206ENST00000591475 JDP2Q8WYK2 163 aa12□□□□□ -0.49
VPS4B-206ENST00000591475 DRC1Q96MC2 740 aa12□□□□□ -0.49
VPS4B-206ENST00000591475 SH3GL2Q99962 352 aa12□□□□□ -0.49
VPS4B-206ENST00000591475 ZMYND12Q9H0C1 365 aa12□□□□□ -0.49
VPS4B-206ENST00000591475 NDST4Q9H3R1 872 aa12□□□□□ -0.49
VPS4B-206ENST00000591475 ZNRF3Q9ULT6 936 aa12□□□□□ -0.49
VPS4B-206ENST00000591475 ROBO3Q96MS0 1386 aa12□□□□□ -0.49
VPS4B-206ENST00000591475 YDJCA8MPS7 323 aa11.99□□□□□ -0.49
VPS4B-206ENST00000591475 PJA2O43164 708 aa11.99□□□□□ -0.49
VPS4B-206ENST00000591475 PAFAH1B1P43034 410 aa11.99□□□□□ -0.49
VPS4B-206ENST00000591475 NAPAP54920 295 aa11.99□□□□□ -0.49
VPS4B-206ENST00000591475 PPP4CP60510 307 aa11.99□□□□□ -0.49
VPS4B-206ENST00000591475 ORC2Q13416 577 aaPredicted RBP11.99□□□□□ -0.49
VPS4B-206ENST00000591475 ALS2CLQ60I27 953 aa11.99□□□□□ -0.49
VPS4B-206ENST00000591475 NFRKBQ6P4R8 1299 aa11.99□□□□□ -0.49
VPS4B-206ENST00000591475 EMBQ6PCB8 327 aa11.99□□□□□ -0.49
VPS4B-206ENST00000591475 SV2BQ7L1I2 683 aa11.99□□□□□ -0.49
VPS4B-206ENST00000591475 NEK8Q86SG6 692 aa11.99□□□□□ -0.49
VPS4B-206ENST00000591475 CCDC155Q8N6L0 562 aa11.99□□□□□ -0.49
VPS4B-206ENST00000591475 HDAC7Q8WUI4 952 aa11.99□□□□□ -0.49
VPS4B-206ENST00000591475 CAPS2Q9BXY5 557 aa11.99□□□□□ -0.49
VPS4B-206ENST00000591475 MMRN2Q9H8L6 949 aa11.99□□□□□ -0.49
VPS4B-206ENST00000591475 C6orf50Q9HD87 102 aa11.99□□□□□ -0.49
VPS4B-206ENST00000591475 FAM207AQ9NSI2 230 aaPredicted RBP11.99□□□□□ -0.49
VPS4B-206ENST00000591475 DMGDHQ9UI17 866 aaKnown RBP11.99□□□□□ -0.49
VPS4B-206ENST00000591475 MYO3BQ8WXR4 1341 aa11.99□□□□□ -0.49
VPS4B-206ENST00000591475 A0A087WUV0 522 aaPredicted RBP11.99□□□□□ -0.49
VPS4B-206ENST00000591475 HSF2BPO75031 334 aa11.99□□□□□ -0.49
VPS4B-206ENST00000591475 TNFRSF8P28908 595 aa11.99□□□□□ -0.49
VPS4B-206ENST00000591475 TECP42680 631 aa11.99□□□□□ -0.49
VPS4B-206ENST00000591475 MAGEA1P43355 309 aa11.99□□□□□ -0.49
VPS4B-206ENST00000591475 PACS2Q86VP3 889 aa11.99□□□□□ -0.49
VPS4B-206ENST00000591475 ZNF444Q8N0Y2 327 aaPredicted RBP11.99□□□□□ -0.49
VPS4B-206ENST00000591475 RRP36Q96EU6 259 aaKnown RBP11.99□□□□□ -0.49
VPS4B-206ENST00000591475 DYNLL2Q96FJ2 89 aa11.99□□□□□ -0.49
VPS4B-206ENST00000591475 RUFY1Q96T51 708 aa11.99□□□□□ -0.49
VPS4B-206ENST00000591475 MRIQ9BWK5 157 aa11.99□□□□□ -0.49
VPS4B-206ENST00000591475 SPZ1Q9BXG8 430 aa11.99□□□□□ -0.49
VPS4B-206ENST00000591475 SLC39A2Q9NP94 309 aa11.99□□□□□ -0.49
VPS4B-206ENST00000591475 STIM2Q9P246 746 aa11.99□□□□□ -0.49
VPS4B-206ENST00000591475 MTMR7Q9Y216 660 aa11.99□□□□□ -0.49
VPS4B-206ENST00000591475 GAKO14976 1311 aa11.98□□□□□ -0.49
VPS4B-206ENST00000591475 GPR75-ASB3A0A0A6YYF3 556 aa11.98□□□□□ -0.49
VPS4B-206ENST00000591475 PVALEFA0A1B0GWK0 134 aa11.98□□□□□ -0.49
VPS4B-206ENST00000591475 SHTN1A0MZ66 631 aa11.98□□□□□ -0.49
VPS4B-206ENST00000591475 ANKRD65E5RJM6 399 aa11.98□□□□□ -0.49
VPS4B-206ENST00000591475 CPP00450 1065 aa11.98□□□□□ -0.49
VPS4B-206ENST00000591475 EPB41P11171 864 aaKnown RBP11.98□□□□□ -0.49
VPS4B-206ENST00000591475 GNA11P29992 359 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms