RNA–Protein interactions for RNA: ENST00000591327.2

GFAP-218, Transcript of glial fibrillary acidic protein, humanhuman

TSL 1 (best)

Gene GFAP, Length 3,255 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-218ENST00000591327 CDC23Q9UJX2 597 aa13.49□□□□□ -0.25
GFAP-218ENST00000591327 TTF2Q9UNY4 1162 aaKnown RBP13.49□□□□□ -0.25
GFAP-218ENST00000591327 SPATA31A6Q5VVP1 1343 aa13.49□□□□□ -0.25
GFAP-218ENST00000591327 CCNHP51946 323 aaPredicted RBP13.49□□□□□ -0.25
GFAP-218ENST00000591327 RBM5P52756 815 aaKnown RBP eCLIP13.49□□□□□ -0.25
GFAP-218ENST00000591327 UBE2SQ16763 222 aa13.49□□□□□ -0.25
GFAP-218ENST00000591327 SWT1Q5T5J6 900 aaKnown RBP13.49□□□□□ -0.25
GFAP-218ENST00000591327 P2RX5Q93086 422 aa13.49□□□□□ -0.25
GFAP-218ENST00000591327 GJA10Q969M2 543 aa13.49□□□□□ -0.25
GFAP-218ENST00000591327 CRAMP1Q96RY5 1269 aa13.49□□□□□ -0.25
GFAP-218ENST00000591327 C7orf25Q9BPX7 421 aa13.49□□□□□ -0.25
GFAP-218ENST00000591327 PPP1R11O60927 126 aaPredicted RBP13.49□□□□□ -0.25
GFAP-218ENST00000591327 GRB10Q13322 594 aa13.49□□□□□ -0.25
GFAP-218ENST00000591327 NEDD9Q14511 834 aa13.49□□□□□ -0.25
GFAP-218ENST00000591327 SH2D3CQ8N5H7 860 aa13.49□□□□□ -0.25
GFAP-218ENST00000591327 KIAA0895Q8NCT3 520 aa13.49□□□□□ -0.25
GFAP-218ENST00000591327 MTMR9Q96QG7 549 aa13.49□□□□□ -0.25
GFAP-218ENST00000591327 TUBGCP2Q9BSJ2 902 aa13.49□□□□□ -0.25
GFAP-218ENST00000591327 CUEDC2Q9H467 287 aa13.49□□□□□ -0.25
GFAP-218ENST00000591327 KIF9Q9HAQ2 790 aa13.49□□□□□ -0.25
GFAP-218ENST00000591327 SLC39A2Q9NP94 309 aa13.49□□□□□ -0.25
GFAP-218ENST00000591327 MAGEC2Q9UBF1 373 aaPredicted RBP13.49□□□□□ -0.25
GFAP-218ENST00000591327 GUCA1BQ9UMX6 200 aa13.49□□□□□ -0.25
GFAP-218ENST00000591327 POTEMA6NI47 508 aa13.48□□□□□ -0.25
GFAP-218ENST00000591327 CAND2O75155 1236 aa13.48□□□□□ -0.25
GFAP-218ENST00000591327 LGR5O75473 907 aa13.48□□□□□ -0.25
GFAP-218ENST00000591327 SMARCA1P28370 1054 aa13.48□□□□□ -0.25
GFAP-218ENST00000591327 SLC16A2P36021 539 aa13.48□□□□□ -0.25
GFAP-218ENST00000591327 ADCY7P51828 1080 aa13.48□□□□□ -0.25
GFAP-218ENST00000591327 NAP1L1P55209 391 aaKnown RBP13.48□□□□□ -0.25
GFAP-218ENST00000591327 CALCRLQ16602 461 aa13.48□□□□□ -0.25
GFAP-218ENST00000591327 WDR59Q6PJI9 974 aa13.48□□□□□ -0.25
GFAP-218ENST00000591327 DHTKD1Q96HY7 919 aaPredicted RBP13.48□□□□□ -0.25
GFAP-218ENST00000591327 PNMA5Q96PV4 448 aa13.48□□□□□ -0.25
GFAP-218ENST00000591327 NUDT12Q9BQG2 462 aa13.48□□□□□ -0.25
GFAP-218ENST00000591327 BLOC1S4Q9NUP1 217 aa13.48□□□□□ -0.25
GFAP-218ENST00000591327 AGPAT5Q9NUQ2 364 aa13.48□□□□□ -0.25
GFAP-218ENST00000591327 RASSF10A6NK89 507 aa13.48□□□□□ -0.25
GFAP-218ENST00000591327 PPP1R12AO14974 1030 aaPredicted RBP13.48□□□□□ -0.25
GFAP-218ENST00000591327 CCNE1P24864 410 aa13.48□□□□□ -0.25
GFAP-218ENST00000591327 IFT88Q13099 833 aa13.48□□□□□ -0.25
GFAP-218ENST00000591327 CNOT6LQ96LI5 555 aaKnown RBP13.48□□□□□ -0.25
GFAP-218ENST00000591327 UIMC1Q96RL1 719 aa13.48□□□□□ -0.25
GFAP-218ENST00000591327 USP40Q9NVE5 1235 aa13.48□□□□□ -0.25
GFAP-218ENST00000591327 LRWD1Q9UFC0 647 aa13.48□□□□□ -0.25
GFAP-218ENST00000591327 LUC7L2Q9Y383 392 aaKnown RBP13.48□□□□□ -0.25
GFAP-218ENST00000591327 IGKV6D-41A0A0C4DH26 115 aa13.47□□□□□ -0.25
GFAP-218ENST00000591327 ESYT2A0FGR8 921 aa13.47□□□□□ -0.25
GFAP-218ENST00000591327 ONECUT3O60422 494 aaPredicted RBP13.47□□□□□ -0.25
GFAP-218ENST00000591327 TRIM37O94972 964 aa13.47□□□□□ -0.25
GFAP-218ENST00000591327 NDUFA10O95299 355 aa13.47□□□□□ -0.25
GFAP-218ENST00000591327 TNNI2P48788 182 aa13.47□□□□□ -0.25
GFAP-218ENST00000591327 IRAK1P51617 712 aa13.47□□□□□ -0.25
GFAP-218ENST00000591327 CEP85LQ5SZL2 805 aa13.47□□□□□ -0.25
GFAP-218ENST00000591327 DYMQ7RTS9 669 aa13.47□□□□□ -0.25
GFAP-218ENST00000591327 OR8K1Q8NGG5 319 aa13.47□□□□□ -0.25
GFAP-218ENST00000591327 THOC1Q96FV9 657 aaKnown RBP13.47□□□□□ -0.25
GFAP-218ENST00000591327 JMJD4Q9H9V9 463 aa13.47□□□□□ -0.25
GFAP-218ENST00000591327 CPSF2Q9P2I0 782 aaKnown RBP13.47□□□□□ -0.25
GFAP-218ENST00000591327 EPN1Q9Y6I3 576 aaPredicted RBP13.47□□□□□ -0.25
GFAP-218ENST00000591327 A0A1W2PQC6 194 aa13.47□□□□□ -0.25
GFAP-218ENST00000591327 MYMKA6NI61 221 aa13.47□□□□□ -0.25
GFAP-218ENST00000591327 SNHG28P0DPA3 235 aa13.47□□□□□ -0.25
GFAP-218ENST00000591327 SP8Q8IXZ3 490 aa13.47□□□□□ -0.25
GFAP-218ENST00000591327 ADGRF4Q8IZF3 695 aa13.47□□□□□ -0.25
GFAP-218ENST00000591327 CALML4Q96GE6 196 aa13.47□□□□□ -0.25
GFAP-218ENST00000591327 DNAJC7Q99615 494 aa13.47□□□□□ -0.25
GFAP-218ENST00000591327 TRIM6Q9C030 488 aaPredicted RBP13.47□□□□□ -0.25
GFAP-218ENST00000591327 SEMA6BQ9H3T3 888 aa13.47□□□□□ -0.25
GFAP-218ENST00000591327 MAGEF1Q9HAY2 307 aa13.47□□□□□ -0.25
GFAP-218ENST00000591327 LTBP1Q14766 1721 aa13.47□□□□□ -0.25
GFAP-218ENST00000591327 PLIN4Q96Q06 1357 aa13.47□□□□□ -0.25
GFAP-218ENST00000591327 KLRG2A4D1S0 409 aaPredicted RBP13.47□□□□□ -0.25
GFAP-218ENST00000591327 SRGNP10124 158 aa13.47□□□□□ -0.25
GFAP-218ENST00000591327 SHMT1P34896 483 aa13.47□□□□□ -0.25
GFAP-218ENST00000591327 SHROOM1Q2M3G4 852 aaPredicted RBP13.47□□□□□ -0.25
GFAP-218ENST00000591327 ASPRV1Q53RT3 343 aa13.47□□□□□ -0.25
GFAP-218ENST00000591327 KCTD1Q719H9 257 aa13.47□□□□□ -0.25
GFAP-218ENST00000591327 ZKSCAN4Q969J2 545 aaPredicted RBP13.47□□□□□ -0.25
GFAP-218ENST00000591327 SERPINB13Q9UIV8 391 aa13.47□□□□□ -0.25
GFAP-218ENST00000591327 CAPN11Q9UMQ6 739 aa13.47□□□□□ -0.25
GFAP-218ENST00000591327 ADAMTSL1Q8N6G6 1762 aa13.47□□□□□ -0.25
GFAP-218ENST00000591327 NFIAQ12857 509 aa13.46□□□□□ -0.25
GFAP-218ENST00000591327 KCNK18Q7Z418 384 aa13.46□□□□□ -0.25
GFAP-218ENST00000591327 ZFPM1Q8IX07 1006 aa13.46□□□□□ -0.25
GFAP-218ENST00000591327 CCDC114Q96M63 670 aa13.46□□□□□ -0.25
GFAP-218ENST00000591327 NAPGQ99747 312 aaPredicted RBP13.46□□□□□ -0.25
GFAP-218ENST00000591327 CAPS2Q9BXY5 557 aa13.46□□□□□ -0.25
GFAP-218ENST00000591327 COA1Q9GZY4 146 aa13.46□□□□□ -0.25
GFAP-218ENST00000591327 ATP6V0A2Q9Y487 856 aa13.46□□□□□ -0.25
GFAP-218ENST00000591327 FOCADQ5VW36 1801 aa13.46□□□□□ -0.25
GFAP-218ENST00000591327 TTLL1O95922 423 aa13.46□□□□□ -0.25
GFAP-218ENST00000591327 MTIF2P46199 727 aaKnown RBP13.46□□□□□ -0.25
GFAP-218ENST00000591327 DNM2P50570 870 aa13.46□□□□□ -0.25
GFAP-218ENST00000591327 ZNF543Q08ER8 600 aa13.46□□□□□ -0.25
GFAP-218ENST00000591327 TBC1D8BQ0IIM8 1120 aa13.46□□□□□ -0.25
GFAP-218ENST00000591327 MIIPQ5JXC2 388 aa13.46□□□□□ -0.25
GFAP-218ENST00000591327 ZC3H12CQ9C0D7 883 aaKnown RBP13.46□□□□□ -0.25
GFAP-218ENST00000591327 ZCWPW1Q9H0M4 648 aa13.46□□□□□ -0.25
GFAP-218ENST00000591327 KCNQ5Q9NR82 932 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms