RNA–Protein interactions for RNA: ENST00000590550.6

MBD3-207, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2 BASIC

Gene MBD3, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-207ENST00000590550 GNGT1P63211 74 aa21.23■□□□□ 0.99
MBD3-207ENST00000590550 ZSCAN29Q8IWY8 852 aaPredicted RBP21.23■□□□□ 0.99
MBD3-207ENST00000590550 NDST4Q9H3R1 872 aa21.23■□□□□ 0.99
MBD3-207ENST00000590550 BTAF1O14981 1849 aa21.23■□□□□ 0.99
MBD3-207ENST00000590550 RGL2O15211 777 aa21.23■□□□□ 0.99
MBD3-207ENST00000590550 RAD21O60216 631 aa21.23■□□□□ 0.99
MBD3-207ENST00000590550 SSBP05455 408 aaKnown RBP eCLIP21.23■□□□□ 0.99
MBD3-207ENST00000590550 MYBL2P10244 700 aa21.23■□□□□ 0.99
MBD3-207ENST00000590550 ADCY7P51828 1080 aa21.23■□□□□ 0.99
MBD3-207ENST00000590550 KIF5AQ12840 1032 aa21.23■□□□□ 0.99
MBD3-207ENST00000590550 CENPPQ6IPU0 288 aa21.23■□□□□ 0.99
MBD3-207ENST00000590550 ERGIC2Q96RQ1 377 aa21.23■□□□□ 0.99
MBD3-207ENST00000590550 CDK5RAP2Q96SN8 1893 aa21.22■□□□□ 0.99
MBD3-207ENST00000590550 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.22■□□□□ 0.99
MBD3-207ENST00000590550 CXCR5P32302 372 aa21.22■□□□□ 0.99
MBD3-207ENST00000590550 VWA3BQ502W6 1294 aa21.22■□□□□ 0.99
MBD3-207ENST00000590550 DDX12PQ92771 950 aa21.22■□□□□ 0.99
MBD3-207ENST00000590550 CAPS2Q9BXY5 557 aa21.22■□□□□ 0.99
MBD3-207ENST00000590550 RIOX1Q9H6W3 641 aa21.22■□□□□ 0.99
MBD3-207ENST00000590550 LRRC4BQ9NT99 713 aa21.22■□□□□ 0.99
MBD3-207ENST00000590550 MTMR4Q9NYA4 1195 aa21.22■□□□□ 0.99
MBD3-207ENST00000590550 SHOX2O60902 331 aaPredicted RBP21.22■□□□□ 0.99
MBD3-207ENST00000590550 PPP1R11O60927 126 aaPredicted RBP21.22■□□□□ 0.99
MBD3-207ENST00000590550 MOCS3O95396 460 aa21.22■□□□□ 0.99
MBD3-207ENST00000590550 CACNB1Q02641 598 aaPredicted RBP21.22■□□□□ 0.99
MBD3-207ENST00000590550 WDR93Q6P2C0 686 aa21.22■□□□□ 0.99
MBD3-207ENST00000590550 RRAGAQ7L523 313 aa21.22■□□□□ 0.99
MBD3-207ENST00000590550 VIPAS39Q9H9C1 493 aa21.22■□□□□ 0.99
MBD3-207ENST00000590550 DDX4Q9NQI0 724 aaKnown RBP21.22■□□□□ 0.99
MBD3-207ENST00000590550 DAGLAQ9Y4D2 1042 aa21.22■□□□□ 0.99
MBD3-207ENST00000590550 EIF4A3P38919 411 aaKnown RBP21.21■□□□□ 0.99
MBD3-207ENST00000590550 VPS72Q15906 364 aa21.21■□□□□ 0.99
MBD3-207ENST00000590550 LRCH2Q5VUJ6 765 aa21.21■□□□□ 0.99
MBD3-207ENST00000590550 PRPF38AQ8NAV1 312 aaKnown RBP21.21■□□□□ 0.99
MBD3-207ENST00000590550 RETREG2Q8NC44 543 aa21.21■□□□□ 0.99
MBD3-207ENST00000590550 N4BP2L2Q92802 583 aaPredicted RBP21.21■□□□□ 0.99
MBD3-207ENST00000590550 FGFBP2Q9BYJ0 223 aa21.21■□□□□ 0.99
MBD3-207ENST00000590550 IFIH1Q9BYX4 1025 aaKnown RBP21.21■□□□□ 0.99
MBD3-207ENST00000590550 EHD2Q9NZN4 543 aa21.21■□□□□ 0.99
MBD3-207ENST00000590550 SIK3Q9Y2K2 1263 aa21.21■□□□□ 0.99
MBD3-207ENST00000590550 LRRC53A6NM62 1247 aa21.21■□□□□ 0.99
MBD3-207ENST00000590550 RDXP35241 583 aaKnown RBP21.21■□□□□ 0.99
MBD3-207ENST00000590550 APBA1Q02410 837 aa21.21■□□□□ 0.99
MBD3-207ENST00000590550 SPA17Q15506 151 aa21.21■□□□□ 0.99
MBD3-207ENST00000590550 COG1Q8WTW3 980 aa21.21■□□□□ 0.99
MBD3-207ENST00000590550 TANGO6Q9C0B7 1094 aa21.21■□□□□ 0.99
MBD3-207ENST00000590550 ZC3H4Q9UPT8 1303 aaKnown RBP21.2■□□□□ 0.98
MBD3-207ENST00000590550 IL1R1P14778 569 aa21.2■□□□□ 0.98
MBD3-207ENST00000590550 MATR3P43243 847 aaKnown RBP eCLIP21.2■□□□□ 0.98
MBD3-207ENST00000590550 VAV2P52735 878 aa21.2■□□□□ 0.98
MBD3-207ENST00000590550 TUBB4BP68371 445 aa21.2■□□□□ 0.98
MBD3-207ENST00000590550 EZH2Q15910 746 aaKnown RBP21.2■□□□□ 0.98
MBD3-207ENST00000590550 UNC13DQ70J99 1090 aa21.2■□□□□ 0.98
MBD3-207ENST00000590550 CCDC170Q8IYT3 715 aa21.2■□□□□ 0.98
MBD3-207ENST00000590550 CENPHQ9H3R5 247 aa21.2■□□□□ 0.98
MBD3-207ENST00000590550 SLC24A3Q9HC58 644 aa21.2■□□□□ 0.98
MBD3-207ENST00000590550 MYH10P35580 1976 aa21.2■□□□□ 0.98
MBD3-207ENST00000590550 KIF11P52732 1056 aa21.2■□□□□ 0.98
MBD3-207ENST00000590550 KCTD1Q719H9 257 aa21.2■□□□□ 0.98
MBD3-207ENST00000590550 TBC1D16Q8TBP0 767 aa21.2■□□□□ 0.98
MBD3-207ENST00000590550 AGPSO00116 658 aa21.19■□□□□ 0.98
MBD3-207ENST00000590550 TMEM266Q2M3C6 531 aa21.19■□□□□ 0.98
MBD3-207ENST00000590550 RAD54LQ92698 747 aa21.19■□□□□ 0.98
MBD3-207ENST00000590550 PLAGL2Q9UPG8 496 aa21.19■□□□□ 0.98
MBD3-207ENST00000590550 PCDHA13Q9Y5I0 950 aa21.19■□□□□ 0.98
MBD3-207ENST00000590550 ELF1P32519 619 aa21.19■□□□□ 0.98
MBD3-207ENST00000590550 SCNN1DP51172 638 aa21.19■□□□□ 0.98
MBD3-207ENST00000590550 ADGRF4Q8IZF3 695 aa21.19■□□□□ 0.98
MBD3-207ENST00000590550 OTUD6BQ8N6M0 293 aa21.19■□□□□ 0.98
MBD3-207ENST00000590550 EHBP1Q8NDI1 1231 aa21.19■□□□□ 0.98
MBD3-207ENST00000590550 HDAC7Q8WUI4 952 aa21.19■□□□□ 0.98
MBD3-207ENST00000590550 JMJD4Q9H9V9 463 aa21.19■□□□□ 0.98
MBD3-207ENST00000590550 POLD4Q9HCU8 107 aa21.19■□□□□ 0.98
MBD3-207ENST00000590550 NLRC4Q9NPP4 1024 aa21.19■□□□□ 0.98
MBD3-207ENST00000590550 SALL4Q9UJQ4 1053 aa21.19■□□□□ 0.98
MBD3-207ENST00000590550 NCK2O43639 380 aa21.19■□□□□ 0.98
MBD3-207ENST00000590550 AKR1B10O60218 316 aa21.19■□□□□ 0.98
MBD3-207ENST00000590550 TUBBP07437 444 aa21.19■□□□□ 0.98
MBD3-207ENST00000590550 MAP9Q49MG5 647 aa21.19■□□□□ 0.98
MBD3-207ENST00000590550 KRT79Q5XKE5 535 aa21.19■□□□□ 0.98
MBD3-207ENST00000590550 TMC4Q7Z404 712 aa21.19■□□□□ 0.98
MBD3-207ENST00000590550 ZKSCAN4Q969J2 545 aaPredicted RBP21.19■□□□□ 0.98
MBD3-207ENST00000590550 ZNF831Q5JPB2 1677 aa21.18■□□□□ 0.98
MBD3-207ENST00000590550 KIAA0754O94854 1291 aa21.18■□□□□ 0.98
MBD3-207ENST00000590550 PLCG2P16885 1265 aa21.18■□□□□ 0.98
MBD3-207ENST00000590550 ATP2B4P23634 1241 aa21.18■□□□□ 0.98
MBD3-207ENST00000590550 FXR2P51116 673 aaKnown RBP eCLIP21.18■□□□□ 0.98
MBD3-207ENST00000590550 GFPT1Q06210 699 aaPredicted RBP21.18■□□□□ 0.98
MBD3-207ENST00000590550 SHROOM1Q2M3G4 852 aaPredicted RBP21.18■□□□□ 0.98
MBD3-207ENST00000590550 NFRKBQ6P4R8 1299 aa21.18■□□□□ 0.98
MBD3-207ENST00000590550 LRRC55Q6ZSA7 311 aa21.18■□□□□ 0.98
MBD3-207ENST00000590550 NPHP3-ACAD11A0A0J9YXS1 232 aa21.18■□□□□ 0.98
MBD3-207ENST00000590550 MPHOSPH10O00566 681 aaKnown RBP21.18■□□□□ 0.98
MBD3-207ENST00000590550 EIF3HO15372 352 aaKnown RBP eCLIP21.18■□□□□ 0.98
MBD3-207ENST00000590550 MARCH6O60337 910 aa21.18■□□□□ 0.98
MBD3-207ENST00000590550 NEBLO76041 1014 aa21.18■□□□□ 0.98
MBD3-207ENST00000590550 SERPINB2P05120 415 aa21.18■□□□□ 0.98
MBD3-207ENST00000590550 NEDD9Q14511 834 aa21.18■□□□□ 0.98
MBD3-207ENST00000590550 NELFCDQ8IXH7 590 aa21.18■□□□□ 0.98
MBD3-207ENST00000590550 PURBQ96QR8 312 aaKnown RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms