RNA–Protein interactions for RNA: ENST00000590431.6

TM6SF2-204, Transcript of transmembrane 6 superfamily member 2, humanhuman

TSL 3

Gene TM6SF2, Length 737 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF2-204ENST00000590431 CTCFLQ8NI51 663 aaPredicted RBP12.56□□□□□ -0.4
TM6SF2-204ENST00000590431 EMID1Q96A84 441 aaPredicted RBP12.56□□□□□ -0.4
TM6SF2-204ENST00000590431 ANO2Q9NQ90 1003 aa12.56□□□□□ -0.4
TM6SF2-204ENST00000590431 RTEL1Q9NZ71 1219 aa12.56□□□□□ -0.4
TM6SF2-204ENST00000590431 hCG_1642624A0A1W2PR95 340 aa12.55□□□□□ -0.4
TM6SF2-204ENST00000590431 CCDC69A6NI79 296 aa12.55□□□□□ -0.4
TM6SF2-204ENST00000590431 PITPNM1O00562 1244 aa12.55□□□□□ -0.4
TM6SF2-204ENST00000590431 ATP2A2P16615 1042 aaKnown RBP12.55□□□□□ -0.4
TM6SF2-204ENST00000590431 UBA1P22314 1058 aaKnown RBP12.55□□□□□ -0.4
TM6SF2-204ENST00000590431 IGFBP4P22692 258 aa12.55□□□□□ -0.4
TM6SF2-204ENST00000590431 MCM5P33992 734 aa12.55□□□□□ -0.4
TM6SF2-204ENST00000590431 MRPS9P82933 396 aaKnown RBP12.55□□□□□ -0.4
TM6SF2-204ENST00000590431 BFSP2Q13515 415 aa12.55□□□□□ -0.4
TM6SF2-204ENST00000590431 MFSD10Q14728 455 aa12.55□□□□□ -0.4
TM6SF2-204ENST00000590431 NECTIN1Q15223 517 aa12.55□□□□□ -0.4
TM6SF2-204ENST00000590431 CELF3Q5SZQ8 465 aaKnown RBP12.55□□□□□ -0.4
TM6SF2-204ENST00000590431 USP17L6PQ6QN14 398 aa12.55□□□□□ -0.4
TM6SF2-204ENST00000590431 CCDC82Q8N4S0 544 aa12.55□□□□□ -0.4
TM6SF2-204ENST00000590431 SAMD3Q8N6K7 520 aa12.55□□□□□ -0.4
TM6SF2-204ENST00000590431 C7orf31Q8N865 590 aa12.55□□□□□ -0.4
TM6SF2-204ENST00000590431 DHX38Q92620 1227 aaKnown RBP12.55□□□□□ -0.4
TM6SF2-204ENST00000590431 SPATA33Q96N06 139 aa12.55□□□□□ -0.4
TM6SF2-204ENST00000590431 GAS2L1Q99501 681 aaPredicted RBP12.55□□□□□ -0.4
TM6SF2-204ENST00000590431 MLXIPQ9HAP2 919 aa12.55□□□□□ -0.4
TM6SF2-204ENST00000590431 SLC28A3Q9HAS3 691 aa12.55□□□□□ -0.4
TM6SF2-204ENST00000590431 PRDM6Q9NQX0 595 aa12.55□□□□□ -0.4
TM6SF2-204ENST00000590431 GTF2IRD1Q9UHL9 959 aa12.55□□□□□ -0.4
TM6SF2-204ENST00000590431 SH2B2O14492 632 aaPredicted RBP12.54□□□□□ -0.4
TM6SF2-204ENST00000590431 DDAH1O94760 285 aa12.54□□□□□ -0.4
TM6SF2-204ENST00000590431 F2P00734 622 aa12.54□□□□□ -0.4
TM6SF2-204ENST00000590431 PFKMP08237 780 aa12.54□□□□□ -0.4
TM6SF2-204ENST00000590431 ACTN1P12814 892 aa12.54□□□□□ -0.4
TM6SF2-204ENST00000590431 KIF5BP33176 963 aa12.54□□□□□ -0.4
TM6SF2-204ENST00000590431 RFC2P35250 354 aa12.54□□□□□ -0.4
TM6SF2-204ENST00000590431 TRAF1Q13077 416 aa12.54□□□□□ -0.4
TM6SF2-204ENST00000590431 ADGRE1Q14246 886 aa12.54□□□□□ -0.4
TM6SF2-204ENST00000590431 HIC1Q14526 733 aa12.54□□□□□ -0.4
TM6SF2-204ENST00000590431 CCDC85BQ15834 202 aaPredicted RBP12.54□□□□□ -0.4
TM6SF2-204ENST00000590431 KCNV1Q6PIU1 500 aa12.54□□□□□ -0.4
TM6SF2-204ENST00000590431 SESTD1Q86VW0 696 aa12.54□□□□□ -0.4
TM6SF2-204ENST00000590431 SMARCC2Q8TAQ2 1214 aa12.54□□□□□ -0.4
TM6SF2-204ENST00000590431 RRP36Q96EU6 259 aaKnown RBP12.54□□□□□ -0.4
TM6SF2-204ENST00000590431 MAP3K14Q99558 947 aa12.54□□□□□ -0.4
TM6SF2-204ENST00000590431 KATNAL1Q9BW62 490 aa12.54□□□□□ -0.4
TM6SF2-204ENST00000590431 SPZ1Q9BXG8 430 aa12.54□□□□□ -0.4
TM6SF2-204ENST00000590431 CERS4Q9HA82 394 aa12.54□□□□□ -0.4
TM6SF2-204ENST00000590431 TELO2Q9Y4R8 837 aa12.54□□□□□ -0.4
TM6SF2-204ENST00000590431 HAS3O00219 553 aa12.53□□□□□ -0.4
TM6SF2-204ENST00000590431 PPFIA4O75335 1185 aa12.53□□□□□ -0.4
TM6SF2-204ENST00000590431 TGFB3P10600 412 aa12.53□□□□□ -0.4
TM6SF2-204ENST00000590431 CKBP12277 381 aa12.53□□□□□ -0.4
TM6SF2-204ENST00000590431 SEMA3FQ13275 785 aa12.53□□□□□ -0.4
TM6SF2-204ENST00000590431 GPNMBQ14956 572 aa12.53□□□□□ -0.4
TM6SF2-204ENST00000590431 PPP2R2DQ66LE6 453 aa12.53□□□□□ -0.4
TM6SF2-204ENST00000590431 TMCO2Q7Z6W1 182 aaPredicted RBP12.53□□□□□ -0.4
TM6SF2-204ENST00000590431 TMTC2Q8N394 836 aa12.53□□□□□ -0.4
TM6SF2-204ENST00000590431 CAGE1Q8TC20 777 aa12.53□□□□□ -0.4
TM6SF2-204ENST00000590431 WNT8BQ93098 351 aa12.53□□□□□ -0.4
TM6SF2-204ENST00000590431 TMEM87BQ96K49 555 aa12.53□□□□□ -0.4
TM6SF2-204ENST00000590431 TCEANC2Q96MN5 208 aa12.53□□□□□ -0.4
TM6SF2-204ENST00000590431 SEC63Q9UGP8 760 aaKnown RBP12.53□□□□□ -0.4
TM6SF2-204ENST00000590431 PCDHA11Q9Y5I1 949 aa12.53□□□□□ -0.4
TM6SF2-204ENST00000590431 TCF20Q9UGU0 1960 aaKnown RBP12.52□□□□□ -0.4
TM6SF2-204ENST00000590431 MICAL3Q7RTP6 2002 aa12.52□□□□□ -0.4
TM6SF2-204ENST00000590431 RFXAPO00287 272 aa12.52□□□□□ -0.41
TM6SF2-204ENST00000590431 MEIS2O14770 477 aa12.52□□□□□ -0.41
TM6SF2-204ENST00000590431 NBNO60934 754 aa12.52□□□□□ -0.41
TM6SF2-204ENST00000590431 CA3P07451 260 aa12.52□□□□□ -0.41
TM6SF2-204ENST00000590431 SELPP16109 830 aa12.52□□□□□ -0.41
TM6SF2-204ENST00000590431 TCTN1Q2MV58 587 aa12.52□□□□□ -0.41
TM6SF2-204ENST00000590431 LRRC8DQ7L1W4 858 aa12.52□□□□□ -0.41
TM6SF2-204ENST00000590431 CENPQQ7L2Z9 268 aaPredicted RBP12.52□□□□□ -0.41
TM6SF2-204ENST00000590431 CYFIP1Q7L576 1253 aa12.52□□□□□ -0.41
TM6SF2-204ENST00000590431 CCDC155Q8N6L0 562 aa12.52□□□□□ -0.41
TM6SF2-204ENST00000590431 AFAP1L1Q8TED9 768 aa12.52□□□□□ -0.41
TM6SF2-204ENST00000590431 CUL5Q93034 780 aa12.52□□□□□ -0.41
TM6SF2-204ENST00000590431 C16orf70Q9BSU1 422 aa12.52□□□□□ -0.41
TM6SF2-204ENST00000590431 SLC12A7Q9Y666 1083 aa12.52□□□□□ -0.41
TM6SF2-204ENST00000590431 FRMPD4Q14CM0 1322 aa12.52□□□□□ -0.41
TM6SF2-204ENST00000590431 LOXHD1Q8IVV2 1947 aa12.51□□□□□ -0.41
TM6SF2-204ENST00000590431 SPATA31C2B4DYI2 1134 aa12.51□□□□□ -0.41
TM6SF2-204ENST00000590431 H3BRB1 525 aa12.51□□□□□ -0.41
TM6SF2-204ENST00000590431 ARHGEF15O94989 841 aa12.51□□□□□ -0.41
TM6SF2-204ENST00000590431 HOXD8P13378 290 aaPredicted RBP12.51□□□□□ -0.41
TM6SF2-204ENST00000590431 SMARCA1P28370 1054 aa12.51□□□□□ -0.41
TM6SF2-204ENST00000590431 LIFRP42702 1097 aa12.51□□□□□ -0.41
TM6SF2-204ENST00000590431 GNAQP50148 359 aa12.51□□□□□ -0.41
TM6SF2-204ENST00000590431 SP4Q02446 784 aa12.51□□□□□ -0.41
TM6SF2-204ENST00000590431 UBE2SQ16763 222 aa12.51□□□□□ -0.41
TM6SF2-204ENST00000590431 GNPTABQ3T906 1256 aa12.51□□□□□ -0.41
TM6SF2-204ENST00000590431 BMP2KLQ5H9B9 411 aa12.51□□□□□ -0.41
TM6SF2-204ENST00000590431 ZNF618Q5T7W0 954 aa12.51□□□□□ -0.41
TM6SF2-204ENST00000590431 MICU3Q86XE3 530 aa12.51□□□□□ -0.41
TM6SF2-204ENST00000590431 MICALL1Q8N3F8 863 aa12.51□□□□□ -0.41
TM6SF2-204ENST00000590431 LZTS2Q9BRK4 669 aa12.51□□□□□ -0.41
TM6SF2-204ENST00000590431 MTA3Q9BTC8 594 aa12.51□□□□□ -0.41
TM6SF2-204ENST00000590431 TUT1Q9H6E5 874 aaKnown RBP12.51□□□□□ -0.41
TM6SF2-204ENST00000590431 PRRC2BQ5JSZ5 2229 aaKnown RBP12.5□□□□□ -0.41
TM6SF2-204ENST00000590431 NOP56O00567 594 aaKnown RBP12.5□□□□□ -0.41
TM6SF2-204ENST00000590431 LGALS2P05162 132 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms