RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.73■■□□□ 1.23
DNMT1-216ENST00000588952 RBM47A0AV96 593 aaKnown RBP22.73■■□□□ 1.23
DNMT1-216ENST00000588952 SPATA31C2B4DYI2 1134 aa22.73■■□□□ 1.23
DNMT1-216ENST00000588952 ADCY6O43306 1168 aa22.73■■□□□ 1.23
DNMT1-216ENST00000588952 PRKAR2AP13861 404 aaKnown RBP22.73■■□□□ 1.23
DNMT1-216ENST00000588952 GCFC2P16383 781 aaKnown RBP22.73■■□□□ 1.23
DNMT1-216ENST00000588952 GJA10Q969M2 543 aa22.73■■□□□ 1.23
DNMT1-216ENST00000588952 GPRASP2Q96D09 838 aa22.73■■□□□ 1.23
DNMT1-216ENST00000588952 USP28Q96RU2 1077 aa22.73■■□□□ 1.23
DNMT1-216ENST00000588952 TMEM60Q9H2L4 133 aa22.73■■□□□ 1.23
DNMT1-216ENST00000588952 CLIC4Q9Y696 253 aa22.73■■□□□ 1.23
DNMT1-216ENST00000588952 MRVI1Q9Y6F6 885 aa22.73■■□□□ 1.23
DNMT1-216ENST00000588952 MSH4O15457 936 aa22.72■■□□□ 1.23
DNMT1-216ENST00000588952 CCND3P30281 292 aaPredicted RBP22.72■■□□□ 1.23
DNMT1-216ENST00000588952 ICAM3P32942 547 aa22.72■■□□□ 1.23
DNMT1-216ENST00000588952 ADCYAP1R1P41586 468 aa22.72■■□□□ 1.23
DNMT1-216ENST00000588952 SP2Q02086 613 aa22.72■■□□□ 1.23
DNMT1-216ENST00000588952 DNM1Q05193 864 aaKnown RBP22.72■■□□□ 1.23
DNMT1-216ENST00000588952 MTMR1Q13613 665 aa22.72■■□□□ 1.23
DNMT1-216ENST00000588952 FBXO46Q6PJ61 603 aaPredicted RBP22.72■■□□□ 1.23
DNMT1-216ENST00000588952 NLRX1Q86UT6 975 aa22.72■■□□□ 1.23
DNMT1-216ENST00000588952 C4orf32Q8N8J7 132 aa22.72■■□□□ 1.23
DNMT1-216ENST00000588952 BCAS3Q9H6U6 928 aa22.72■■□□□ 1.23
DNMT1-216ENST00000588952 AGO4Q9HCK5 861 aaKnown RBP22.72■■□□□ 1.23
DNMT1-216ENST00000588952 KCNH7Q9NS40 1196 aa22.72■■□□□ 1.23
DNMT1-216ENST00000588952 PKD2L1Q9P0L9 805 aa22.72■■□□□ 1.23
DNMT1-216ENST00000588952 FIBPO43427 364 aa22.71■■□□□ 1.23
DNMT1-216ENST00000588952 ATP9AO75110 1047 aa22.71■■□□□ 1.23
DNMT1-216ENST00000588952 CCDC144BQ3MJ40 725 aa22.71■■□□□ 1.23
DNMT1-216ENST00000588952 GNPTABQ3T906 1256 aa22.71■■□□□ 1.23
DNMT1-216ENST00000588952 GJC2Q5T442 439 aaPredicted RBP22.71■■□□□ 1.23
DNMT1-216ENST00000588952 CCDC62Q6P9F0 684 aa22.71■■□□□ 1.23
DNMT1-216ENST00000588952 ETNPPLQ8TBG4 499 aa22.71■■□□□ 1.23
DNMT1-216ENST00000588952 LENG1Q96BZ8 264 aaPredicted RBP22.71■■□□□ 1.23
DNMT1-216ENST00000588952 NAP1L4Q99733 375 aaKnown RBP22.71■■□□□ 1.23
DNMT1-216ENST00000588952 KCNMB3Q9NPA1 279 aa22.71■■□□□ 1.23
DNMT1-216ENST00000588952 TFIP11Q9UBB9 837 aaKnown RBP22.71■■□□□ 1.23
DNMT1-216ENST00000588952 NRBP1Q9UHY1 535 aa22.71■■□□□ 1.23
DNMT1-216ENST00000588952 NEMFO60524 1076 aa22.7■■□□□ 1.22
DNMT1-216ENST00000588952 KCNA2P16389 499 aa22.7■■□□□ 1.22
DNMT1-216ENST00000588952 SETQ01105 290 aaPredicted RBP22.7■■□□□ 1.22
DNMT1-216ENST00000588952 CEBPZQ03701 1054 aaKnown RBP22.7■■□□□ 1.22
DNMT1-216ENST00000588952 ITGB3BPQ13352 177 aaPredicted RBP22.7■■□□□ 1.22
DNMT1-216ENST00000588952 SF3A1Q15459 793 aaKnown RBP22.7■■□□□ 1.22
DNMT1-216ENST00000588952 LY6KQ17RY6 165 aa22.7■■□□□ 1.22
DNMT1-216ENST00000588952 SCFD2Q8WU76 684 aa22.7■■□□□ 1.22
DNMT1-216ENST00000588952 HAS1Q92839 578 aa22.7■■□□□ 1.22
DNMT1-216ENST00000588952 COPS5Q92905 334 aa22.7■■□□□ 1.22
DNMT1-216ENST00000588952 DDX41Q9UJV9 622 aaKnown RBP22.7■■□□□ 1.22
DNMT1-216ENST00000588952 CENPFP49454 3210 aa22.7■■□□□ 1.22
DNMT1-216ENST00000588952 SMPD1P17405 629 aa22.69■■□□□ 1.22
DNMT1-216ENST00000588952 UBA1P22314 1058 aaKnown RBP22.69■■□□□ 1.22
DNMT1-216ENST00000588952 PTPAQ15257 358 aa22.69■■□□□ 1.22
DNMT1-216ENST00000588952 PKN2Q16513 984 aaKnown RBP22.69■■□□□ 1.22
DNMT1-216ENST00000588952 SLC9C1Q4G0N8 1177 aa22.69■■□□□ 1.22
DNMT1-216ENST00000588952 ANO1Q5XXA6 986 aa22.69■■□□□ 1.22
DNMT1-216ENST00000588952 MTMR9Q96QG7 549 aa22.69■■□□□ 1.22
DNMT1-216ENST00000588952 DOCK5Q9H7D0 1870 aa22.68■■□□□ 1.22
DNMT1-216ENST00000588952 SORBS3O60504 671 aa22.68■■□□□ 1.22
DNMT1-216ENST00000588952 PTGDRQ13258 359 aa22.68■■□□□ 1.22
DNMT1-216ENST00000588952 ORC2Q13416 577 aaPredicted RBP22.68■■□□□ 1.22
DNMT1-216ENST00000588952 CALCRLQ16602 461 aa22.68■■□□□ 1.22
DNMT1-216ENST00000588952 SLC5A5Q92911 643 aa22.68■■□□□ 1.22
DNMT1-216ENST00000588952 ZNF396Q96N95 335 aaPredicted RBP22.68■■□□□ 1.22
DNMT1-216ENST00000588952 ZNF577Q9BSK1 485 aa22.68■■□□□ 1.22
DNMT1-216ENST00000588952 TELO2Q9Y4R8 837 aa22.68■■□□□ 1.22
DNMT1-216ENST00000588952 POTEFA5A3E0 1075 aa22.67■■□□□ 1.22
DNMT1-216ENST00000588952 IPO5O00410 1097 aaKnown RBP22.67■■□□□ 1.22
DNMT1-216ENST00000588952 DHX15O43143 795 aaKnown RBP22.67■■□□□ 1.22
DNMT1-216ENST00000588952 TXNP10599 105 aaKnown RBP22.67■■□□□ 1.22
DNMT1-216ENST00000588952 NASPP49321 788 aaPredicted RBP22.67■■□□□ 1.22
DNMT1-216ENST00000588952 TTLL4Q14679 1199 aa22.67■■□□□ 1.22
DNMT1-216ENST00000588952 IQSEC1Q6DN90 963 aa22.67■■□□□ 1.22
DNMT1-216ENST00000588952 TNPO1Q92973 898 aaKnown RBP22.67■■□□□ 1.22
DNMT1-216ENST00000588952 CDHR1Q96JP9 859 aa22.67■■□□□ 1.22
DNMT1-216ENST00000588952 MAFGO15525 162 aa22.66■■□□□ 1.22
DNMT1-216ENST00000588952 OR52Z1P0C646 297 aa22.66■■□□□ 1.22
DNMT1-216ENST00000588952 CNGA1P29973 690 aa22.66■■□□□ 1.22
DNMT1-216ENST00000588952 ATP2C1P98194 919 aaPredicted RBP22.66■■□□□ 1.22
DNMT1-216ENST00000588952 TNFAIP2Q03169 654 aa22.66■■□□□ 1.22
DNMT1-216ENST00000588952 MTFR1Q15390 333 aa22.66■■□□□ 1.22
DNMT1-216ENST00000588952 IL17AQ16552 155 aa22.66■■□□□ 1.22
DNMT1-216ENST00000588952 DUSP28Q4G0W2 176 aa22.66■■□□□ 1.22
DNMT1-216ENST00000588952 MCOLN1Q9GZU1 580 aa22.66■■□□□ 1.22
DNMT1-216ENST00000588952 UNC93B1Q9H1C4 597 aa22.66■■□□□ 1.22
DNMT1-216ENST00000588952 POLR3EQ9NVU0 708 aa22.66■■□□□ 1.22
DNMT1-216ENST00000588952 FAM184BQ9ULE4 1060 aa22.66■■□□□ 1.22
DNMT1-216ENST00000588952 GNEQ9Y223 722 aaKnown RBP22.66■■□□□ 1.22
DNMT1-216ENST00000588952 SEPT4O43236 478 aa22.65■■□□□ 1.22
DNMT1-216ENST00000588952 GGPS1O95749 300 aa22.65■■□□□ 1.22
DNMT1-216ENST00000588952 MYCP01106 439 aaPredicted RBP22.65■■□□□ 1.22
DNMT1-216ENST00000588952 TGFB3P10600 412 aa22.65■■□□□ 1.22
DNMT1-216ENST00000588952 AKR1A1P14550 325 aa22.65■■□□□ 1.22
DNMT1-216ENST00000588952 ARHGAP1Q07960 439 aa22.65■■□□□ 1.22
DNMT1-216ENST00000588952 KCNV1Q6PIU1 500 aa22.65■■□□□ 1.22
DNMT1-216ENST00000588952 SENP7Q9BQF6 1050 aa22.65■■□□□ 1.22
DNMT1-216ENST00000588952 ATP6V1DQ9Y5K8 247 aa22.65■■□□□ 1.22
DNMT1-216ENST00000588952 DDX39AO00148 427 aaKnown RBP22.64■■□□□ 1.21
DNMT1-216ENST00000588952 TBX3O15119 743 aa22.64■■□□□ 1.21
DNMT1-216ENST00000588952 PSMD10O75832 226 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms