RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 USP26Q9BXU7 913 aa13.31□□□□□ -0.28
RFX1-204ENST00000588885 BCAS3Q9H6U6 928 aa13.31□□□□□ -0.28
RFX1-204ENST00000588885 SNX14Q9Y5W7 946 aa13.31□□□□□ -0.28
RFX1-204ENST00000588885 KLF18A0A0U1RQI7 1052 aa13.3□□□□□ -0.28
RFX1-204ENST00000588885 ZBTB43O43298 467 aa13.3□□□□□ -0.28
RFX1-204ENST00000588885 MMP3P08254 477 aa13.3□□□□□ -0.28
RFX1-204ENST00000588885 CASTP20810 708 aaKnown RBP13.3□□□□□ -0.28
RFX1-204ENST00000588885 SP2Q02086 613 aa13.3□□□□□ -0.28
RFX1-204ENST00000588885 PPIGQ13427 754 aaKnown RBP eCLIP13.3□□□□□ -0.28
RFX1-204ENST00000588885 LAMC2Q13753 1193 aa13.3□□□□□ -0.28
RFX1-204ENST00000588885 UBE2SQ16763 222 aa13.3□□□□□ -0.28
RFX1-204ENST00000588885 RTN1Q16799 776 aa13.3□□□□□ -0.28
RFX1-204ENST00000588885 Q6ZUG5 572 aa13.3□□□□□ -0.28
RFX1-204ENST00000588885 ZNF365Q70YC5 407 aa13.3□□□□□ -0.28
RFX1-204ENST00000588885 ALG1Q9BT22 464 aa13.3□□□□□ -0.28
RFX1-204ENST00000588885 NOC4LQ9BVI4 516 aaKnown RBP13.3□□□□□ -0.28
RFX1-204ENST00000588885 PSTPIP2Q9H939 334 aa13.3□□□□□ -0.28
RFX1-204ENST00000588885 V9GY48 417 aaPredicted RBP13.3□□□□□ -0.28
RFX1-204ENST00000588885 GOLGA8AA7E2F4 631 aa13.29□□□□□ -0.28
RFX1-204ENST00000588885 GOLGA8BA8MQT2 603 aa13.29□□□□□ -0.28
RFX1-204ENST00000588885 MEIS2O14770 477 aa13.29□□□□□ -0.28
RFX1-204ENST00000588885 GALR2O43603 387 aaPredicted RBP13.29□□□□□ -0.28
RFX1-204ENST00000588885 GGPS1O95749 300 aa13.29□□□□□ -0.28
RFX1-204ENST00000588885 ZNF286BP0CG31 522 aa13.29□□□□□ -0.28
RFX1-204ENST00000588885 HSPA4P34932 840 aa13.29□□□□□ -0.28
RFX1-204ENST00000588885 RBM25P49756 843 aaKnown RBP13.29□□□□□ -0.28
RFX1-204ENST00000588885 MRPS9P82933 396 aaKnown RBP13.29□□□□□ -0.28
RFX1-204ENST00000588885 APOBRQ0VD83 1088 aa13.29□□□□□ -0.28
RFX1-204ENST00000588885 DGKDQ16760 1214 aa13.29□□□□□ -0.28
RFX1-204ENST00000588885 TMEM240Q5SV17 173 aa13.29□□□□□ -0.28
RFX1-204ENST00000588885 KAT2BQ92831 832 aa13.29□□□□□ -0.28
RFX1-204ENST00000588885 SCLYQ96I15 445 aa13.29□□□□□ -0.28
RFX1-204ENST00000588885 SPATA33Q96N06 139 aa13.29□□□□□ -0.28
RFX1-204ENST00000588885 SEZ6LQ9BYH1 1024 aa13.29□□□□□ -0.28
RFX1-204ENST00000588885 WNT8AQ9H1J5 351 aa13.29□□□□□ -0.28
RFX1-204ENST00000588885 MLXIPQ9HAP2 919 aa13.29□□□□□ -0.28
RFX1-204ENST00000588885 GBF1Q92538 1859 aa13.29□□□□□ -0.28
RFX1-204ENST00000588885 RBAK-RBAKDNI3L0D1 243 aa13.28□□□□□ -0.28
RFX1-204ENST00000588885 HMGB1P09429 215 aaKnown RBP13.28□□□□□ -0.28
RFX1-204ENST00000588885 SUPT20HL2P0C7V6 817 aa13.28□□□□□ -0.28
RFX1-204ENST00000588885 UBA1P22314 1058 aaKnown RBP13.28□□□□□ -0.28
RFX1-204ENST00000588885 CDC27P30260 824 aa13.28□□□□□ -0.28
RFX1-204ENST00000588885 CELF3Q5SZQ8 465 aaKnown RBP13.28□□□□□ -0.28
RFX1-204ENST00000588885 MYSM1Q5VVJ2 828 aa13.28□□□□□ -0.28
RFX1-204ENST00000588885 FAM109BQ6ICB4 259 aaPredicted RBP13.28□□□□□ -0.28
RFX1-204ENST00000588885 NFRKBQ6P4R8 1299 aa13.28□□□□□ -0.28
RFX1-204ENST00000588885 BLOC1S2Q6QNY1 142 aa13.28□□□□□ -0.28
RFX1-204ENST00000588885 PPTC7Q8NI37 304 aa13.28□□□□□ -0.28
RFX1-204ENST00000588885 KCNB2Q92953 911 aa13.28□□□□□ -0.28
RFX1-204ENST00000588885 BRF1Q92994 677 aa13.28□□□□□ -0.28
RFX1-204ENST00000588885 IL23AQ9NPF7 189 aa13.28□□□□□ -0.28
RFX1-204ENST00000588885 NOD1Q9Y239 953 aa13.28□□□□□ -0.28
RFX1-204ENST00000588885 RBM19Q9Y4C8 960 aaKnown RBP13.28□□□□□ -0.28
RFX1-204ENST00000588885 GRXCR1A8MXD5 290 aa13.27□□□□□ -0.29
RFX1-204ENST00000588885 EPB41L2O43491 1005 aaKnown RBP13.27□□□□□ -0.29
RFX1-204ENST00000588885 PPFIA3O75145 1194 aa13.27□□□□□ -0.29
RFX1-204ENST00000588885 FGBP02675 491 aa13.27□□□□□ -0.29
RFX1-204ENST00000588885 ADD1P35611 737 aaKnown RBP13.27□□□□□ -0.29
RFX1-204ENST00000588885 PSEN2P49810 448 aa13.27□□□□□ -0.29
RFX1-204ENST00000588885 SP4Q02446 784 aa13.27□□□□□ -0.29
RFX1-204ENST00000588885 MFSD10Q14728 455 aa13.27□□□□□ -0.29
RFX1-204ENST00000588885 PTGISQ16647 500 aa13.27□□□□□ -0.29
RFX1-204ENST00000588885 HSDL1Q3SXM5 330 aa13.27□□□□□ -0.29
RFX1-204ENST00000588885 GNPTABQ3T906 1256 aa13.27□□□□□ -0.29
RFX1-204ENST00000588885 WWC2Q6AWC2 1192 aa13.27□□□□□ -0.29
RFX1-204ENST00000588885 GDF6Q6KF10 455 aaPredicted RBP13.27□□□□□ -0.29
RFX1-204ENST00000588885 KCNV1Q6PIU1 500 aa13.27□□□□□ -0.29
RFX1-204ENST00000588885 CYFIP1Q7L576 1253 aa13.27□□□□□ -0.29
RFX1-204ENST00000588885 OTOP2Q7RTS6 562 aa13.27□□□□□ -0.29
RFX1-204ENST00000588885 DEFB128Q7Z7B8 93 aa13.27□□□□□ -0.29
RFX1-204ENST00000588885 EMID1Q96A84 441 aaPredicted RBP13.27□□□□□ -0.29
RFX1-204ENST00000588885 FAM217BQ9NTX9 383 aaPredicted RBP13.27□□□□□ -0.29
RFX1-204ENST00000588885 RBM28Q9NW13 759 aaKnown RBP13.27□□□□□ -0.29
RFX1-204ENST00000588885 TELO2Q9Y4R8 837 aa13.27□□□□□ -0.29
RFX1-204ENST00000588885 MYH7BA7E2Y1 1941 aa13.26□□□□□ -0.29
RFX1-204ENST00000588885 SPATA31C2B4DYI2 1134 aa13.26□□□□□ -0.29
RFX1-204ENST00000588885 PIK3CDO00329 1044 aa13.26□□□□□ -0.29
RFX1-204ENST00000588885 TGFB3P10600 412 aa13.26□□□□□ -0.29
RFX1-204ENST00000588885 RPS6KB1P23443 525 aa13.26□□□□□ -0.29
RFX1-204ENST00000588885 NAPAP54920 295 aa13.26□□□□□ -0.29
RFX1-204ENST00000588885 SMAD3P84022 425 aaKnown RBP13.26□□□□□ -0.29
RFX1-204ENST00000588885 FUT2Q10981 343 aa13.26□□□□□ -0.29
RFX1-204ENST00000588885 SEMA3FQ13275 785 aa13.26□□□□□ -0.29
RFX1-204ENST00000588885 KIAA0753Q2KHM9 967 aa13.26□□□□□ -0.29
RFX1-204ENST00000588885 C7orf31Q8N865 590 aa13.26□□□□□ -0.29
RFX1-204ENST00000588885 RETREG2Q8NC44 543 aa13.26□□□□□ -0.29
RFX1-204ENST00000588885 CNTNAP5Q8WYK1 1306 aa13.26□□□□□ -0.29
RFX1-204ENST00000588885 PGBD1Q96JS3 809 aa13.26□□□□□ -0.29
RFX1-204ENST00000588885 PKD2L1Q9P0L9 805 aa13.26□□□□□ -0.29
RFX1-204ENST00000588885 CXXC1Q9P0U4 656 aaPredicted RBP13.26□□□□□ -0.29
RFX1-204ENST00000588885 HDAC6Q9UBN7 1215 aa13.26□□□□□ -0.29
RFX1-204ENST00000588885 PCDHA6Q9UN73 950 aa13.26□□□□□ -0.29
RFX1-204ENST00000588885 PCDHA8Q9Y5H6 950 aa13.26□□□□□ -0.29
RFX1-204ENST00000588885 FRMPD4Q14CM0 1322 aa13.25□□□□□ -0.29
RFX1-204ENST00000588885 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.25□□□□□ -0.29
RFX1-204ENST00000588885 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.25□□□□□ -0.29
RFX1-204ENST00000588885 SPDYE3A6NKU9 549 aa13.25□□□□□ -0.29
RFX1-204ENST00000588885 NOP56O00567 594 aaKnown RBP13.25□□□□□ -0.29
RFX1-204ENST00000588885 PPFIA4O75335 1185 aa13.25□□□□□ -0.29
RFX1-204ENST00000588885 METAP2P50579 478 aaKnown RBP eCLIP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms