RNA–Protein interactions for RNA: ENST00000588381.1

CDIP1-212, Transcript of cell death inducing p53 target 1, humanhuman

TSL 3

Gene CDIP1, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDIP1-212ENST00000588381 SPATA33Q96N06 139 aa20.28■□□□□ 0.84
CDIP1-212ENST00000588381 INPP4AQ96PE3 977 aaPredicted RBP20.28■□□□□ 0.84
CDIP1-212ENST00000588381 UNC80Q8N2C7 3258 aa20.28■□□□□ 0.84
CDIP1-212ENST00000588381 MEIS2O14770 477 aa20.27■□□□□ 0.84
CDIP1-212ENST00000588381 GGPS1O95749 300 aa20.27■□□□□ 0.84
CDIP1-212ENST00000588381 FOSL2P15408 326 aa20.27■□□□□ 0.84
CDIP1-212ENST00000588381 PSEN2P49810 448 aa20.27■□□□□ 0.84
CDIP1-212ENST00000588381 MRPS9P82933 396 aaKnown RBP20.27■□□□□ 0.84
CDIP1-212ENST00000588381 HSDL1Q3SXM5 330 aa20.27■□□□□ 0.84
CDIP1-212ENST00000588381 SMARCC2Q8TAQ2 1214 aa20.27■□□□□ 0.84
CDIP1-212ENST00000588381 PIBF1Q8WXW3 757 aa20.27■□□□□ 0.84
CDIP1-212ENST00000588381 NEK1Q96PY6 1258 aa20.27■□□□□ 0.84
CDIP1-212ENST00000588381 CTAGE1Q96RT6 745 aa20.27■□□□□ 0.84
CDIP1-212ENST00000588381 MLXIPQ9HAP2 919 aa20.27■□□□□ 0.84
CDIP1-212ENST00000588381 SPATA31C2B4DYI2 1134 aa20.26■□□□□ 0.83
CDIP1-212ENST00000588381 DLL1O00548 723 aa20.26■□□□□ 0.83
CDIP1-212ENST00000588381 UBA1P22314 1058 aaKnown RBP20.26■□□□□ 0.83
CDIP1-212ENST00000588381 CHMP4BP1P59074 171 aa20.26■□□□□ 0.83
CDIP1-212ENST00000588381 COL9A3Q14050 684 aaPredicted RBP20.26■□□□□ 0.83
CDIP1-212ENST00000588381 NEDD9Q14511 834 aa20.26■□□□□ 0.83
CDIP1-212ENST00000588381 MFSD10Q14728 455 aa20.26■□□□□ 0.83
CDIP1-212ENST00000588381 KIAA0753Q2KHM9 967 aa20.26■□□□□ 0.83
CDIP1-212ENST00000588381 PCNX4Q63HM2 1172 aa20.26■□□□□ 0.83
CDIP1-212ENST00000588381 SYNE3Q6ZMZ3 975 aa20.26■□□□□ 0.83
CDIP1-212ENST00000588381 DEFB128Q7Z7B8 93 aa20.26■□□□□ 0.83
CDIP1-212ENST00000588381 TEX2Q8IWB9 1127 aa20.26■□□□□ 0.83
CDIP1-212ENST00000588381 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.26■□□□□ 0.83
CDIP1-212ENST00000588381 PHOSPHO2Q8TCD6 241 aa20.26■□□□□ 0.83
CDIP1-212ENST00000588381 HDAC6Q9UBN7 1215 aa20.26■□□□□ 0.83
CDIP1-212ENST00000588381 FIBPO43427 364 aa20.25■□□□□ 0.83
CDIP1-212ENST00000588381 CDC45O75419 566 aa20.25■□□□□ 0.83
CDIP1-212ENST00000588381 PLEKHA8P1O95397 391 aa20.25■□□□□ 0.83
CDIP1-212ENST00000588381 EXOSC10Q01780 885 aaKnown RBP20.25■□□□□ 0.83
CDIP1-212ENST00000588381 KRT32Q14532 448 aa20.25■□□□□ 0.83
CDIP1-212ENST00000588381 USP17L6PQ6QN14 398 aa20.25■□□□□ 0.83
CDIP1-212ENST00000588381 DHX32Q7L7V1 743 aaKnown RBP20.25■□□□□ 0.83
CDIP1-212ENST00000588381 PPP1R13LQ8WUF5 828 aa20.25■□□□□ 0.83
CDIP1-212ENST00000588381 SENP7Q9BQF6 1050 aa20.25■□□□□ 0.83
CDIP1-212ENST00000588381 C16orf70Q9BSU1 422 aa20.25■□□□□ 0.83
CDIP1-212ENST00000588381 PSTPIP2Q9H939 334 aa20.25■□□□□ 0.83
CDIP1-212ENST00000588381 SLC28A3Q9HAS3 691 aa20.25■□□□□ 0.83
CDIP1-212ENST00000588381 PCDHA11Q9Y5I1 949 aa20.25■□□□□ 0.83
CDIP1-212ENST00000588381 SELPP16109 830 aa20.24■□□□□ 0.83
CDIP1-212ENST00000588381 ATP2A2P16615 1042 aaKnown RBP20.24■□□□□ 0.83
CDIP1-212ENST00000588381 PTK7Q13308 1070 aa20.24■□□□□ 0.83
CDIP1-212ENST00000588381 METTL7BQ6UX53 244 aa20.24■□□□□ 0.83
CDIP1-212ENST00000588381 TMTC3Q6ZXV5 915 aa20.24■□□□□ 0.83
CDIP1-212ENST00000588381 ALG1Q9BT22 464 aa20.24■□□□□ 0.83
CDIP1-212ENST00000588381 USP26Q9BXU7 913 aa20.24■□□□□ 0.83
CDIP1-212ENST00000588381 ZBBXA8MT70 800 aa20.23■□□□□ 0.83
CDIP1-212ENST00000588381 H3BRB1 525 aa20.23■□□□□ 0.83
CDIP1-212ENST00000588381 BAIAP3O94812 1187 aa20.23■□□□□ 0.83
CDIP1-212ENST00000588381 HMGB1P09429 215 aaKnown RBP20.23■□□□□ 0.83
CDIP1-212ENST00000588381 ZNF286BP0CG31 522 aa20.23■□□□□ 0.83
CDIP1-212ENST00000588381 RXRAP19793 462 aa20.23■□□□□ 0.83
CDIP1-212ENST00000588381 CMTR1Q8N1G2 835 aaKnown RBP20.23■□□□□ 0.83
CDIP1-212ENST00000588381 GIMAP8Q8ND71 665 aaPredicted RBP20.23■□□□□ 0.83
CDIP1-212ENST00000588381 GPKOWQ92917 476 aaPredicted RBP eCLIP20.23■□□□□ 0.83
CDIP1-212ENST00000588381 SLC9A7Q96T83 725 aa20.23■□□□□ 0.83
CDIP1-212ENST00000588381 LRRC2Q9BYS8 371 aa20.23■□□□□ 0.83
CDIP1-212ENST00000588381 FTOQ9C0B1 505 aaKnown RBP eCLIP20.23■□□□□ 0.83
CDIP1-212ENST00000588381 TUT1Q9H6E5 874 aaKnown RBP20.23■□□□□ 0.83
CDIP1-212ENST00000588381 RBM28Q9NW13 759 aaKnown RBP20.23■□□□□ 0.83
CDIP1-212ENST00000588381 RTEL1Q9NZ71 1219 aa20.23■□□□□ 0.83
CDIP1-212ENST00000588381 MYH7BA7E2Y1 1941 aa20.23■□□□□ 0.83
CDIP1-212ENST00000588381 CKBP12277 381 aa20.22■□□□□ 0.83
CDIP1-212ENST00000588381 APOA5Q6Q788 366 aa20.22■□□□□ 0.83
CDIP1-212ENST00000588381 LRRC8DQ7L1W4 858 aa20.22■□□□□ 0.83
CDIP1-212ENST00000588381 NLRX1Q86UT6 975 aa20.22■□□□□ 0.83
CDIP1-212ENST00000588381 SKAP1Q86WV1 359 aa20.22■□□□□ 0.83
CDIP1-212ENST00000588381 DHX38Q92620 1227 aaKnown RBP20.22■□□□□ 0.83
CDIP1-212ENST00000588381 ZFP91Q96JP5 570 aaPredicted RBP20.22■□□□□ 0.83
CDIP1-212ENST00000588381 CDHR1Q96JP9 859 aa20.22■□□□□ 0.83
CDIP1-212ENST00000588381 GAS2L1Q99501 681 aaPredicted RBP20.22■□□□□ 0.83
CDIP1-212ENST00000588381 YBX2Q9Y2T7 364 aaKnown RBP20.22■□□□□ 0.83
CDIP1-212ENST00000588381 NOP56O00567 594 aaKnown RBP20.21■□□□□ 0.83
CDIP1-212ENST00000588381 MAFGO15525 162 aa20.21■□□□□ 0.83
CDIP1-212ENST00000588381 CXCL10P02778 98 aa20.21■□□□□ 0.83
CDIP1-212ENST00000588381 HOXC8P31273 242 aa20.21■□□□□ 0.83
CDIP1-212ENST00000588381 RCAN1P53805 252 aa20.21■□□□□ 0.83
CDIP1-212ENST00000588381 SEMA3FQ13275 785 aa20.21■□□□□ 0.83
CDIP1-212ENST00000588381 GPNMBQ14956 572 aa20.21■□□□□ 0.83
CDIP1-212ENST00000588381 MICU3Q86XE3 530 aa20.21■□□□□ 0.83
CDIP1-212ENST00000588381 RASEFQ8IZ41 740 aa20.21■□□□□ 0.83
CDIP1-212ENST00000588381 NKX2-4Q9H2Z4 354 aa20.21■□□□□ 0.83
CDIP1-212ENST00000588381 PRUNE2Q8WUY3 3088 aa20.21■□□□□ 0.83
CDIP1-212ENST00000588381 CYFIP1Q7L576 1253 aa20.2■□□□□ 0.82
CDIP1-212ENST00000588381 CCDC82Q8N4S0 544 aa20.2■□□□□ 0.82
CDIP1-212ENST00000588381 KCNB2Q92953 911 aa20.2■□□□□ 0.82
CDIP1-212ENST00000588381 GPRASP2Q96D09 838 aa20.2■□□□□ 0.82
CDIP1-212ENST00000588381 GPR20Q99678 358 aa20.2■□□□□ 0.82
CDIP1-212ENST00000588381 BCAS3Q9H6U6 928 aa20.2■□□□□ 0.82
CDIP1-212ENST00000588381 KIF28PB7ZC32 967 aa20.19■□□□□ 0.82
CDIP1-212ENST00000588381 ZBTB43O43298 467 aa20.19■□□□□ 0.82
CDIP1-212ENST00000588381 LGALS2P05162 132 aa20.19■□□□□ 0.82
CDIP1-212ENST00000588381 RABGGTBP53611 331 aa20.19■□□□□ 0.82
CDIP1-212ENST00000588381 TRIM71Q2Q1W2 868 aaKnown RBP20.19■□□□□ 0.82
CDIP1-212ENST00000588381 ADCK5Q3MIX3 580 aa20.19■□□□□ 0.82
CDIP1-212ENST00000588381 SERINC5Q86VE9 423 aa20.19■□□□□ 0.82
CDIP1-212ENST00000588381 CCDC136Q96JN2 1154 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms