RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 ASB2Q96Q27 587 aa18.46■□□□□ 0.55
ERCC1-206ENST00000588300 BAZ2BQ9UIF8 2168 aaKnown RBP18.45■□□□□ 0.54
ERCC1-206ENST00000588300 PNMA6FA0A0J9YX94 578 aa18.45■□□□□ 0.54
ERCC1-206ENST00000588300 PPFIA4O75335 1185 aa18.45■□□□□ 0.54
ERCC1-206ENST00000588300 GGPS1O95749 300 aa18.45■□□□□ 0.54
ERCC1-206ENST00000588300 TGFB3P10600 412 aa18.45■□□□□ 0.54
ERCC1-206ENST00000588300 CKBP12277 381 aa18.45■□□□□ 0.54
ERCC1-206ENST00000588300 MRPS5P82675 430 aaKnown RBP18.45■□□□□ 0.54
ERCC1-206ENST00000588300 TROAPQ12815 778 aa18.45■□□□□ 0.54
ERCC1-206ENST00000588300 PTK7Q13308 1070 aa18.45■□□□□ 0.54
ERCC1-206ENST00000588300 CELF3Q5SZQ8 465 aaKnown RBP18.45■□□□□ 0.54
ERCC1-206ENST00000588300 CNKSR3Q6P9H4 555 aa18.45■□□□□ 0.54
ERCC1-206ENST00000588300 PPP4R3CPQ6ZMV5 832 aa18.45■□□□□ 0.54
ERCC1-206ENST00000588300 IL31RAQ8NI17 732 aa18.45■□□□□ 0.54
ERCC1-206ENST00000588300 SPATA33Q96N06 139 aa18.45■□□□□ 0.54
ERCC1-206ENST00000588300 SENP2Q9HC62 589 aa18.45■□□□□ 0.54
ERCC1-206ENST00000588300 TNFRSF10AO00220 468 aa18.44■□□□□ 0.54
ERCC1-206ENST00000588300 SGSM2O43147 1006 aa18.44■□□□□ 0.54
ERCC1-206ENST00000588300 CYTH3O43739 400 aa18.44■□□□□ 0.54
ERCC1-206ENST00000588300 GTPBP6O43824 516 aaPredicted RBP18.44■□□□□ 0.54
ERCC1-206ENST00000588300 UBA1P22314 1058 aaKnown RBP18.44■□□□□ 0.54
ERCC1-206ENST00000588300 WDR5P61964 334 aaKnown RBP18.44■□□□□ 0.54
ERCC1-206ENST00000588300 TAP1Q03518 808 aa18.44■□□□□ 0.54
ERCC1-206ENST00000588300 GPNMBQ14956 572 aa18.44■□□□□ 0.54
ERCC1-206ENST00000588300 HSDL1Q3SXM5 330 aa18.44■□□□□ 0.54
ERCC1-206ENST00000588300 CATIPQ7Z7H3 387 aa18.44■□□□□ 0.54
ERCC1-206ENST00000588300 FCHSD1Q86WN1 690 aa18.44■□□□□ 0.54
ERCC1-206ENST00000588300 IL27Q8NEV9 243 aa18.44■□□□□ 0.54
ERCC1-206ENST00000588300 CERS4Q9HA82 394 aa18.44■□□□□ 0.54
ERCC1-206ENST00000588300 TAF6LQ9Y6J9 622 aa18.44■□□□□ 0.54
ERCC1-206ENST00000588300 TLL1O43897 1013 aa18.43■□□□□ 0.54
ERCC1-206ENST00000588300 SORBS3O60504 671 aa18.43■□□□□ 0.54
ERCC1-206ENST00000588300 CXCL10P02778 98 aa18.43■□□□□ 0.54
ERCC1-206ENST00000588300 POU3F3P20264 500 aaPredicted RBP18.43■□□□□ 0.54
ERCC1-206ENST00000588300 MLXIPQ9HAP2 919 aa18.43■□□□□ 0.54
ERCC1-206ENST00000588300 TRANK1O15050 2925 aa18.43■□□□□ 0.54
ERCC1-206ENST00000588300 RFXAPO00287 272 aa18.42■□□□□ 0.54
ERCC1-206ENST00000588300 NBNO60934 754 aa18.42■□□□□ 0.54
ERCC1-206ENST00000588300 SP2Q02086 613 aa18.42■□□□□ 0.54
ERCC1-206ENST00000588300 GNPTABQ3T906 1256 aa18.42■□□□□ 0.54
ERCC1-206ENST00000588300 ARNTL2Q8WYA1 636 aa18.42■□□□□ 0.54
ERCC1-206ENST00000588300 ZFP91Q96JP5 570 aaPredicted RBP18.42■□□□□ 0.54
ERCC1-206ENST00000588300 MTCH2Q9Y6C9 303 aa18.42■□□□□ 0.54
ERCC1-206ENST00000588300 COL4A4P53420 1690 aaPredicted RBP18.41■□□□□ 0.54
ERCC1-206ENST00000588300 ABHD14A-ACY1A0A1B0GW23 586 aa18.41■□□□□ 0.54
ERCC1-206ENST00000588300 EPOPA6NHQ4 379 aa18.41■□□□□ 0.54
ERCC1-206ENST00000588300 EFCAB14O75071 495 aa18.41■□□□□ 0.54
ERCC1-206ENST00000588300 STAM2O75886 525 aa18.41■□□□□ 0.54
ERCC1-206ENST00000588300 ARHGEF15O94989 841 aa18.41■□□□□ 0.54
ERCC1-206ENST00000588300 ANTXR2P58335 489 aa18.41■□□□□ 0.54
ERCC1-206ENST00000588300 ZNF200P98182 395 aaPredicted RBP18.41■□□□□ 0.54
ERCC1-206ENST00000588300 TRIM71Q2Q1W2 868 aaKnown RBP18.41■□□□□ 0.54
ERCC1-206ENST00000588300 ZNF618Q5T7W0 954 aa18.41■□□□□ 0.54
ERCC1-206ENST00000588300 MB21D2Q8IYB1 491 aaPredicted RBP18.41■□□□□ 0.54
ERCC1-206ENST00000588300 IGDCC4Q8TDY8 1250 aa18.41■□□□□ 0.54
ERCC1-206ENST00000588300 ADAMTS19Q8TE59 1207 aa18.41■□□□□ 0.54
ERCC1-206ENST00000588300 GPKOWQ92917 476 aaPredicted RBP eCLIP18.41■□□□□ 0.54
ERCC1-206ENST00000588300 MAP4K1Q92918 833 aa18.41■□□□□ 0.54
ERCC1-206ENST00000588300 C16orf70Q9BSU1 422 aa18.41■□□□□ 0.54
ERCC1-206ENST00000588300 ZBED2Q9BTP6 218 aa18.41■□□□□ 0.54
ERCC1-206ENST00000588300 FRMPD4Q14CM0 1322 aa18.41■□□□□ 0.54
ERCC1-206ENST00000588300 DEFB103AP81534 67 aa18.4■□□□□ 0.54
ERCC1-206ENST00000588300 IKBKEQ14164 716 aa18.4■□□□□ 0.54
ERCC1-206ENST00000588300 SKIV2LQ15477 1246 aaKnown RBP18.4■□□□□ 0.54
ERCC1-206ENST00000588300 CTCFLQ8NI51 663 aaPredicted RBP18.4■□□□□ 0.54
ERCC1-206ENST00000588300 PIBF1Q8WXW3 757 aa18.4■□□□□ 0.54
ERCC1-206ENST00000588300 WNT8BQ93098 351 aa18.4■□□□□ 0.54
ERCC1-206ENST00000588300 MAP3K14Q99558 947 aa18.4■□□□□ 0.54
ERCC1-206ENST00000588300 SPZ1Q9BXG8 430 aa18.4■□□□□ 0.54
ERCC1-206ENST00000588300 RBM8AQ9Y5S9 174 aaKnown RBP18.4■□□□□ 0.54
ERCC1-206ENST00000588300 PRRC2BQ5JSZ5 2229 aaKnown RBP18.39■□□□□ 0.54
ERCC1-206ENST00000588300 DOCK5Q9H7D0 1870 aa18.39■□□□□ 0.54
ERCC1-206ENST00000588300 C17orf102A2RUQ5 167 aa18.39■□□□□ 0.53
ERCC1-206ENST00000588300 H3BRB1 525 aa18.39■□□□□ 0.53
ERCC1-206ENST00000588300 NOP56O00567 594 aaKnown RBP18.39■□□□□ 0.53
ERCC1-206ENST00000588300 DDAH1O94760 285 aa18.39■□□□□ 0.53
ERCC1-206ENST00000588300 ICAM3P32942 547 aa18.39■□□□□ 0.53
ERCC1-206ENST00000588300 KIF5BP33176 963 aa18.39■□□□□ 0.53
ERCC1-206ENST00000588300 IRX6P78412 446 aaPredicted RBP18.39■□□□□ 0.53
ERCC1-206ENST00000588300 NEDD9Q14511 834 aa18.39■□□□□ 0.53
ERCC1-206ENST00000588300 AAK1Q2M2I8 961 aa18.39■□□□□ 0.53
ERCC1-206ENST00000588300 TRAF7Q6Q0C0 670 aa18.39■□□□□ 0.53
ERCC1-206ENST00000588300 CASC1Q6TDU7 716 aa18.39■□□□□ 0.53
ERCC1-206ENST00000588300 TMCO2Q7Z6W1 182 aaPredicted RBP18.39■□□□□ 0.53
ERCC1-206ENST00000588300 SERINC5Q86VE9 423 aa18.39■□□□□ 0.53
ERCC1-206ENST00000588300 ZNF654Q8IZM8 581 aa18.39■□□□□ 0.53
ERCC1-206ENST00000588300 RRP36Q96EU6 259 aaKnown RBP18.39■□□□□ 0.53
ERCC1-206ENST00000588300 INPP4AQ96PE3 977 aaPredicted RBP18.39■□□□□ 0.53
ERCC1-206ENST00000588300 UHRF1Q96T88 793 aaPredicted RBP18.39■□□□□ 0.53
ERCC1-206ENST00000588300 MTA3Q9BTC8 594 aa18.39■□□□□ 0.53
ERCC1-206ENST00000588300 TUT1Q9H6E5 874 aaKnown RBP18.39■□□□□ 0.53
ERCC1-206ENST00000588300 EMSYQ7Z589 1322 aa18.39■□□□□ 0.53
ERCC1-206ENST00000588300 LGR5O75473 907 aa18.38■□□□□ 0.53
ERCC1-206ENST00000588300 GJB5O95377 273 aa18.38■□□□□ 0.53
ERCC1-206ENST00000588300 LGALS2P05162 132 aa18.38■□□□□ 0.53
ERCC1-206ENST00000588300 MRPS9P82933 396 aaKnown RBP18.38■□□□□ 0.53
ERCC1-206ENST00000588300 HIC1Q14526 733 aa18.38■□□□□ 0.53
ERCC1-206ENST00000588300 TCTN1Q2MV58 587 aa18.38■□□□□ 0.53
ERCC1-206ENST00000588300 SMARCC2Q8TAQ2 1214 aa18.38■□□□□ 0.53
ERCC1-206ENST00000588300 CUL5Q93034 780 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms