RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 TSPYL2Q9H2G4 693 aaPredicted RBP19.6■□□□□ 0.73
TMED1-203ENST00000588259 RIOX1Q9H6W3 641 aa19.6■□□□□ 0.73
TMED1-203ENST00000588259 MLXIPQ9HAP2 919 aa19.6■□□□□ 0.73
TMED1-203ENST00000588259 RBM8AQ9Y5S9 174 aaKnown RBP19.6■□□□□ 0.73
TMED1-203ENST00000588259 CYTH3O43739 400 aa19.59■□□□□ 0.73
TMED1-203ENST00000588259 RGS20O76081 388 aa19.59■□□□□ 0.73
TMED1-203ENST00000588259 BAIAP3O94812 1187 aa19.59■□□□□ 0.73
TMED1-203ENST00000588259 CKBP12277 381 aa19.59■□□□□ 0.73
TMED1-203ENST00000588259 UBA1P22314 1058 aaKnown RBP19.59■□□□□ 0.73
TMED1-203ENST00000588259 VSIG10LQ86VR7 867 aa19.59■□□□□ 0.73
TMED1-203ENST00000588259 CTCFLQ8NI51 663 aaPredicted RBP19.59■□□□□ 0.73
TMED1-203ENST00000588259 PHOSPHO2Q8TCD6 241 aa19.59■□□□□ 0.73
TMED1-203ENST00000588259 ARNTL2Q8WYA1 636 aa19.59■□□□□ 0.73
TMED1-203ENST00000588259 CTAGE1Q96RT6 745 aa19.59■□□□□ 0.73
TMED1-203ENST00000588259 ZBED2Q9BTP6 218 aa19.59■□□□□ 0.73
TMED1-203ENST00000588259 MYL10Q9BUA6 226 aa19.59■□□□□ 0.73
TMED1-203ENST00000588259 PRRC2BQ5JSZ5 2229 aaKnown RBP19.59■□□□□ 0.73
TMED1-203ENST00000588259 PTPRSQ13332 1948 aa19.59■□□□□ 0.73
TMED1-203ENST00000588259 DOCK5Q9H7D0 1870 aa19.58■□□□□ 0.73
TMED1-203ENST00000588259 RFXAPO00287 272 aa19.58■□□□□ 0.72
TMED1-203ENST00000588259 NOP56O00567 594 aaKnown RBP19.58■□□□□ 0.72
TMED1-203ENST00000588259 GTPBP6O43824 516 aaPredicted RBP19.58■□□□□ 0.72
TMED1-203ENST00000588259 TLL1O43897 1013 aa19.58■□□□□ 0.72
TMED1-203ENST00000588259 TROAPQ12815 778 aa19.58■□□□□ 0.72
TMED1-203ENST00000588259 HSDL1Q3SXM5 330 aa19.58■□□□□ 0.72
TMED1-203ENST00000588259 MYSM1Q5VVJ2 828 aa19.58■□□□□ 0.72
TMED1-203ENST00000588259 CASC1Q6TDU7 716 aa19.58■□□□□ 0.72
TMED1-203ENST00000588259 NFXL1Q6ZNB6 911 aa19.58■□□□□ 0.72
TMED1-203ENST00000588259 ATXN2LQ8WWM7 1075 aaKnown RBP19.58■□□□□ 0.72
TMED1-203ENST00000588259 GPKOWQ92917 476 aaPredicted RBP eCLIP19.58■□□□□ 0.72
TMED1-203ENST00000588259 PPFIA4O75335 1185 aa19.57■□□□□ 0.72
TMED1-203ENST00000588259 KIF5BP33176 963 aa19.57■□□□□ 0.72
TMED1-203ENST00000588259 ANTXR2P58335 489 aa19.57■□□□□ 0.72
TMED1-203ENST00000588259 ZNF200P98182 395 aaPredicted RBP19.57■□□□□ 0.72
TMED1-203ENST00000588259 PTK7Q13308 1070 aa19.57■□□□□ 0.72
TMED1-203ENST00000588259 GNPTABQ3T906 1256 aa19.57■□□□□ 0.72
TMED1-203ENST00000588259 CNKSR3Q6P9H4 555 aa19.57■□□□□ 0.72
TMED1-203ENST00000588259 MB21D2Q8IYB1 491 aaPredicted RBP19.57■□□□□ 0.72
TMED1-203ENST00000588259 ZNF654Q8IZM8 581 aa19.57■□□□□ 0.72
TMED1-203ENST00000588259 RRP36Q96EU6 259 aaKnown RBP19.57■□□□□ 0.72
TMED1-203ENST00000588259 SEC63Q9UGP8 760 aaKnown RBP19.57■□□□□ 0.72
TMED1-203ENST00000588259 PARNO95453 639 aaKnown RBP19.56■□□□□ 0.72
TMED1-203ENST00000588259 WDR5P61964 334 aaKnown RBP19.56■□□□□ 0.72
TMED1-203ENST00000588259 MRPS5P82675 430 aaKnown RBP19.56■□□□□ 0.72
TMED1-203ENST00000588259 SP2Q02086 613 aa19.56■□□□□ 0.72
TMED1-203ENST00000588259 TMCO2Q7Z6W1 182 aaPredicted RBP19.56■□□□□ 0.72
TMED1-203ENST00000588259 SMARCC2Q8TAQ2 1214 aa19.56■□□□□ 0.72
TMED1-203ENST00000588259 MAP4K1Q92918 833 aa19.56■□□□□ 0.72
TMED1-203ENST00000588259 CUL5Q93034 780 aa19.56■□□□□ 0.72
TMED1-203ENST00000588259 ASB2Q96Q27 587 aa19.56■□□□□ 0.72
TMED1-203ENST00000588259 HAS3O00219 553 aa19.55■□□□□ 0.72
TMED1-203ENST00000588259 PRC1O43663 620 aa19.55■□□□□ 0.72
TMED1-203ENST00000588259 NBNO60934 754 aa19.55■□□□□ 0.72
TMED1-203ENST00000588259 DDAH1O94760 285 aa19.55■□□□□ 0.72
TMED1-203ENST00000588259 TGFB3P10600 412 aa19.55■□□□□ 0.72
TMED1-203ENST00000588259 HOXD8P13378 290 aaPredicted RBP19.55■□□□□ 0.72
TMED1-203ENST00000588259 SP4Q02446 784 aa19.55■□□□□ 0.72
TMED1-203ENST00000588259 TAP1Q03518 808 aa19.55■□□□□ 0.72
TMED1-203ENST00000588259 RBL2Q08999 1139 aa19.55■□□□□ 0.72
TMED1-203ENST00000588259 ZNF618Q5T7W0 954 aa19.55■□□□□ 0.72
TMED1-203ENST00000588259 IGDCC4Q8TDY8 1250 aa19.55■□□□□ 0.72
TMED1-203ENST00000588259 LY9Q9HBG7 655 aa19.55■□□□□ 0.72
TMED1-203ENST00000588259 RTEL1Q9NZ71 1219 aa19.55■□□□□ 0.72
TMED1-203ENST00000588259 EPOPA6NHQ4 379 aa19.54■□□□□ 0.72
TMED1-203ENST00000588259 CCDC69A6NI79 296 aa19.54■□□□□ 0.72
TMED1-203ENST00000588259 ARHGEF15O94989 841 aa19.54■□□□□ 0.72
TMED1-203ENST00000588259 THPOP40225 353 aa19.54■□□□□ 0.72
TMED1-203ENST00000588259 DEFB103AP81534 67 aa19.54■□□□□ 0.72
TMED1-203ENST00000588259 FAM117BQ6P1L5 589 aa19.54■□□□□ 0.72
TMED1-203ENST00000588259 ADAMTS19Q8TE59 1207 aa19.54■□□□□ 0.72
TMED1-203ENST00000588259 WNT8BQ93098 351 aa19.54■□□□□ 0.72
TMED1-203ENST00000588259 COL4A4P53420 1690 aaPredicted RBP19.54■□□□□ 0.72
TMED1-203ENST00000588259 NCOR1O75376 2440 aa19.54■□□□□ 0.72
TMED1-203ENST00000588259 TRANK1O15050 2925 aa19.53■□□□□ 0.72
TMED1-203ENST00000588259 C17orf102A2RUQ5 167 aa19.53■□□□□ 0.72
TMED1-203ENST00000588259 TNFRSF10AO00220 468 aa19.53■□□□□ 0.72
TMED1-203ENST00000588259 LGALS2P05162 132 aa19.53■□□□□ 0.72
TMED1-203ENST00000588259 MCM5P33992 734 aa19.53■□□□□ 0.72
TMED1-203ENST00000588259 IKBKEQ14164 716 aa19.53■□□□□ 0.72
TMED1-203ENST00000588259 GPNMBQ14956 572 aa19.53■□□□□ 0.72
TMED1-203ENST00000588259 ATP6V0A1Q93050 837 aa19.53■□□□□ 0.72
TMED1-203ENST00000588259 C16orf70Q9BSU1 422 aa19.53■□□□□ 0.72
TMED1-203ENST00000588259 SPZ1Q9BXG8 430 aa19.53■□□□□ 0.72
TMED1-203ENST00000588259 TCF20Q9UGU0 1960 aaKnown RBP19.53■□□□□ 0.72
TMED1-203ENST00000588259 ABHD14A-ACY1A0A1B0GW23 586 aa19.52■□□□□ 0.72
TMED1-203ENST00000588259 LCHNA4D1U4 455 aa19.52■□□□□ 0.72
TMED1-203ENST00000588259 H3BRB1 525 aa19.52■□□□□ 0.72
TMED1-203ENST00000588259 RBAK-RBAKDNI3L0D1 243 aa19.52■□□□□ 0.72
TMED1-203ENST00000588259 FIBPO43427 364 aa19.52■□□□□ 0.72
TMED1-203ENST00000588259 STAM2O75886 525 aa19.52■□□□□ 0.72
TMED1-203ENST00000588259 PLEKHA8P1O95397 391 aa19.52■□□□□ 0.72
TMED1-203ENST00000588259 CXCL10P02778 98 aa19.52■□□□□ 0.72
TMED1-203ENST00000588259 SMIM10L2AP0DMW4 78 aa19.52■□□□□ 0.72
TMED1-203ENST00000588259 SMIM10L2BP0DMW5 78 aa19.52■□□□□ 0.72
TMED1-203ENST00000588259 RXRAP19793 462 aa19.52■□□□□ 0.72
TMED1-203ENST00000588259 MRPS9P82933 396 aaKnown RBP19.52■□□□□ 0.72
TMED1-203ENST00000588259 NEDD9Q14511 834 aa19.52■□□□□ 0.72
TMED1-203ENST00000588259 HIC1Q14526 733 aa19.52■□□□□ 0.72
TMED1-203ENST00000588259 TRIM71Q2Q1W2 868 aaKnown RBP19.52■□□□□ 0.72
TMED1-203ENST00000588259 KRT40Q6A162 431 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms