RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 CYP3A7P24462 503 aa12.17□□□□□ -0.46
SMARCA4-213ENST00000587988 TNFAIP2Q03169 654 aa12.17□□□□□ -0.46
SMARCA4-213ENST00000587988 TTLL4Q14679 1199 aa12.17□□□□□ -0.46
SMARCA4-213ENST00000587988 GNPTABQ3T906 1256 aa12.17□□□□□ -0.46
SMARCA4-213ENST00000587988 PRR16Q569H4 304 aa12.17□□□□□ -0.46
SMARCA4-213ENST00000587988 IQSEC1Q6DN90 963 aa12.17□□□□□ -0.46
SMARCA4-213ENST00000587988 FAM173BQ6P4H8 233 aa12.17□□□□□ -0.46
SMARCA4-213ENST00000587988 NLRX1Q86UT6 975 aa12.17□□□□□ -0.46
SMARCA4-213ENST00000587988 PLA2G4DQ86XP0 818 aa12.17□□□□□ -0.46
SMARCA4-213ENST00000587988 SCFD2Q8WU76 684 aa12.17□□□□□ -0.46
SMARCA4-213ENST00000587988 GPRASP2Q96D09 838 aa12.17□□□□□ -0.46
SMARCA4-213ENST00000587988 MBOAT7Q96N66 472 aa12.17□□□□□ -0.46
SMARCA4-213ENST00000587988 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.17□□□□□ -0.46
SMARCA4-213ENST00000587988 KCNH7Q9NS40 1196 aa12.17□□□□□ -0.46
SMARCA4-213ENST00000587988 PKD2L1Q9P0L9 805 aa12.17□□□□□ -0.46
SMARCA4-213ENST00000587988 DAXXQ9UER7 740 aaPredicted RBP12.17□□□□□ -0.46
SMARCA4-213ENST00000587988 DDX41Q9UJV9 622 aaKnown RBP12.17□□□□□ -0.46
SMARCA4-213ENST00000587988 FAM184BQ9ULE4 1060 aa12.17□□□□□ -0.46
SMARCA4-213ENST00000587988 GNEQ9Y223 722 aaKnown RBP12.17□□□□□ -0.46
SMARCA4-213ENST00000587988 MRVI1Q9Y6F6 885 aa12.17□□□□□ -0.46
SMARCA4-213ENST00000587988 DOCK5Q9H7D0 1870 aa12.17□□□□□ -0.46
SMARCA4-213ENST00000587988 FIBPO43427 364 aa12.16□□□□□ -0.46
SMARCA4-213ENST00000587988 SORBS3O60504 671 aa12.16□□□□□ -0.46
SMARCA4-213ENST00000587988 BRD1O95696 1058 aa12.16□□□□□ -0.46
SMARCA4-213ENST00000587988 ZSCAN22P10073 491 aaPredicted RBP12.16□□□□□ -0.46
SMARCA4-213ENST00000587988 TXNP10599 105 aaKnown RBP12.16□□□□□ -0.46
SMARCA4-213ENST00000587988 IRX5P78411 483 aaPredicted RBP12.16□□□□□ -0.46
SMARCA4-213ENST00000587988 MTMR1Q13613 665 aa12.16□□□□□ -0.46
SMARCA4-213ENST00000587988 ZNF174Q15697 407 aa12.16□□□□□ -0.46
SMARCA4-213ENST00000587988 Q4G0T1 1027 aa12.16□□□□□ -0.46
SMARCA4-213ENST00000587988 DUSP28Q4G0W2 176 aa12.16□□□□□ -0.46
SMARCA4-213ENST00000587988 LHX8Q68G74 356 aa12.16□□□□□ -0.46
SMARCA4-213ENST00000587988 PPP4R3AQ6IN85 833 aa12.16□□□□□ -0.46
SMARCA4-213ENST00000587988 MOXD1Q6UVY6 613 aa12.16□□□□□ -0.46
SMARCA4-213ENST00000587988 NIPA1Q7RTP0 329 aa12.16□□□□□ -0.46
SMARCA4-213ENST00000587988 BRAPQ7Z569 592 aa12.16□□□□□ -0.46
SMARCA4-213ENST00000587988 GJA10Q969M2 543 aa12.16□□□□□ -0.46
SMARCA4-213ENST00000587988 IPO9Q96P70 1041 aaKnown RBP12.16□□□□□ -0.46
SMARCA4-213ENST00000587988 RNF208Q9H0X6 261 aa12.16□□□□□ -0.46
SMARCA4-213ENST00000587988 AGO4Q9HCK5 861 aaKnown RBP12.16□□□□□ -0.46
SMARCA4-213ENST00000587988 PAK6Q9NQU5 681 aaPredicted RBP12.16□□□□□ -0.46
SMARCA4-213ENST00000587988 DDX20Q9UHI6 824 aaKnown RBP12.16□□□□□ -0.46
SMARCA4-213ENST00000587988 DDX25Q9UHL0 483 aaKnown RBP12.16□□□□□ -0.46
SMARCA4-213ENST00000587988 PCDHB6Q9Y5E3 794 aa12.16□□□□□ -0.46
SMARCA4-213ENST00000587988 CENPFP49454 3210 aa12.16□□□□□ -0.46
SMARCA4-213ENST00000587988 MSH4O15457 936 aa12.15□□□□□ -0.46
SMARCA4-213ENST00000587988 F13A1P00488 732 aa12.15□□□□□ -0.46
SMARCA4-213ENST00000587988 TGFB3P10600 412 aa12.15□□□□□ -0.46
SMARCA4-213ENST00000587988 KCNA2P16389 499 aa12.15□□□□□ -0.46
SMARCA4-213ENST00000587988 UBA1P22314 1058 aaKnown RBP12.15□□□□□ -0.46
SMARCA4-213ENST00000587988 MCM7P33993 719 aa12.15□□□□□ -0.46
SMARCA4-213ENST00000587988 TTC38Q5R3I4 469 aa12.15□□□□□ -0.46
SMARCA4-213ENST00000587988 MYSM1Q5VVJ2 828 aa12.15□□□□□ -0.46
SMARCA4-213ENST00000587988 POTEDQ86YR6 584 aa12.15□□□□□ -0.46
SMARCA4-213ENST00000587988 DEFB118Q96PH6 123 aa12.15□□□□□ -0.46
SMARCA4-213ENST00000587988 NOL7Q9UMY1 257 aaKnown RBP12.15□□□□□ -0.46
SMARCA4-213ENST00000587988 TELO2Q9Y4R8 837 aa12.15□□□□□ -0.46
SMARCA4-213ENST00000587988 FRMPD3Q5JV73 1810 aa12.14□□□□□ -0.47
SMARCA4-213ENST00000587988 MYADML2A6NDP7 307 aa12.14□□□□□ -0.47
SMARCA4-213ENST00000587988 MAFGO15525 162 aa12.14□□□□□ -0.47
SMARCA4-213ENST00000587988 DHX15O43143 795 aaKnown RBP12.14□□□□□ -0.47
SMARCA4-213ENST00000587988 DYNC1LI2O43237 492 aaPredicted RBP12.14□□□□□ -0.47
SMARCA4-213ENST00000587988 DUSP11O75319 330 aaKnown RBP12.14□□□□□ -0.47
SMARCA4-213ENST00000587988 PGK1P00558 417 aa12.14□□□□□ -0.47
SMARCA4-213ENST00000587988 RARBP10826 455 aa12.14□□□□□ -0.47
SMARCA4-213ENST00000587988 PDIA4P13667 645 aaKnown RBP12.14□□□□□ -0.47
SMARCA4-213ENST00000587988 GCFC2P16383 781 aaKnown RBP12.14□□□□□ -0.47
SMARCA4-213ENST00000587988 TRAPPC10P48553 1259 aa12.14□□□□□ -0.47
SMARCA4-213ENST00000587988 SETQ01105 290 aaPredicted RBP12.14□□□□□ -0.47
SMARCA4-213ENST00000587988 ARHGAP1Q07960 439 aa12.14□□□□□ -0.47
SMARCA4-213ENST00000587988 ITGB3BPQ13352 177 aaPredicted RBP12.14□□□□□ -0.47
SMARCA4-213ENST00000587988 KCNV1Q6PIU1 500 aa12.14□□□□□ -0.47
SMARCA4-213ENST00000587988 CYFIP1Q7L576 1253 aa12.14□□□□□ -0.47
SMARCA4-213ENST00000587988 ETNPPLQ8TBG4 499 aa12.14□□□□□ -0.47
SMARCA4-213ENST00000587988 HAS1Q92839 578 aa12.14□□□□□ -0.47
SMARCA4-213ENST00000587988 CDHR1Q96JP9 859 aa12.14□□□□□ -0.47
SMARCA4-213ENST00000587988 ZNF577Q9BSK1 485 aa12.14□□□□□ -0.47
SMARCA4-213ENST00000587988 TMEM60Q9H2L4 133 aa12.14□□□□□ -0.47
SMARCA4-213ENST00000587988 ZSCAN16Q9H4T2 348 aaPredicted RBP12.14□□□□□ -0.47
SMARCA4-213ENST00000587988 SYNRGQ9UMZ2 1314 aa12.13□□□□□ -0.47
SMARCA4-213ENST00000587988 DDX39AO00148 427 aaKnown RBP12.13□□□□□ -0.47
SMARCA4-213ENST00000587988 IPO5O00410 1097 aaKnown RBP12.13□□□□□ -0.47
SMARCA4-213ENST00000587988 NKRFO15226 690 aaKnown RBP eCLIP12.13□□□□□ -0.47
SMARCA4-213ENST00000587988 CTAGE5O15320 804 aa12.13□□□□□ -0.47
SMARCA4-213ENST00000587988 GGPS1O95749 300 aa12.13□□□□□ -0.47
SMARCA4-213ENST00000587988 GH1P01241 217 aa12.13□□□□□ -0.47
SMARCA4-213ENST00000587988 FOXD4L6Q3SYB3 417 aaPredicted RBP12.13□□□□□ -0.47
SMARCA4-213ENST00000587988 RILPL1Q5EBL4 403 aa12.13□□□□□ -0.47
SMARCA4-213ENST00000587988 CELF3Q5SZQ8 465 aaKnown RBP12.13□□□□□ -0.47
SMARCA4-213ENST00000587988 FOXD4L3Q6VB84 417 aaPredicted RBP12.13□□□□□ -0.47
SMARCA4-213ENST00000587988 TLK2Q86UE8 772 aa12.13□□□□□ -0.47
SMARCA4-213ENST00000587988 C4orf32Q8N8J7 132 aa12.13□□□□□ -0.47
SMARCA4-213ENST00000587988 OR6J1Q8NGC5 347 aa12.13□□□□□ -0.47
SMARCA4-213ENST00000587988 SLC5A5Q92911 643 aa12.13□□□□□ -0.47
SMARCA4-213ENST00000587988 CHAMP1Q96JM3 812 aa12.13□□□□□ -0.47
SMARCA4-213ENST00000587988 NAP1L4Q99733 375 aaKnown RBP12.13□□□□□ -0.47
SMARCA4-213ENST00000587988 SENP7Q9BQF6 1050 aa12.13□□□□□ -0.47
SMARCA4-213ENST00000587988 FTOQ9C0B1 505 aaKnown RBP eCLIP12.13□□□□□ -0.47
SMARCA4-213ENST00000587988 KCNMB3Q9NPA1 279 aa12.13□□□□□ -0.47
SMARCA4-213ENST00000587988 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms