RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 MTMR9Q96QG7 549 aa11.7□□□□□ -0.54
CLPTM1-207ENST00000587537 TINF2Q9BSI4 451 aa11.7□□□□□ -0.54
CLPTM1-207ENST00000587537 TFIP11Q9UBB9 837 aaKnown RBP11.7□□□□□ -0.54
CLPTM1-207ENST00000587537 GJD2Q9UKL4 321 aa11.7□□□□□ -0.54
CLPTM1-207ENST00000587537 CNPY2Q9Y2B0 182 aa11.7□□□□□ -0.54
CLPTM1-207ENST00000587537 LRRC37A2A6NM11 1700 aa11.69□□□□□ -0.54
CLPTM1-207ENST00000587537 NFASCO94856 1347 aa11.69□□□□□ -0.54
CLPTM1-207ENST00000587537 FAM86B1E9PN63 330 aa11.69□□□□□ -0.54
CLPTM1-207ENST00000587537 IPO5O00410 1097 aaKnown RBP11.69□□□□□ -0.54
CLPTM1-207ENST00000587537 NKRFO15226 690 aaKnown RBP eCLIP11.69□□□□□ -0.54
CLPTM1-207ENST00000587537 PEX10O60683 326 aa11.69□□□□□ -0.54
CLPTM1-207ENST00000587537 COBLO75128 1261 aa11.69□□□□□ -0.54
CLPTM1-207ENST00000587537 TDP2O95551 362 aa11.69□□□□□ -0.54
CLPTM1-207ENST00000587537 PGK2P07205 417 aa11.69□□□□□ -0.54
CLPTM1-207ENST00000587537 FAM86B2P0C5J1 330 aa11.69□□□□□ -0.54
CLPTM1-207ENST00000587537 MYCLP12524 364 aaPredicted RBP11.69□□□□□ -0.54
CLPTM1-207ENST00000587537 TXLNAP40222 546 aa11.69□□□□□ -0.54
CLPTM1-207ENST00000587537 UBE2HP62256 183 aa11.69□□□□□ -0.54
CLPTM1-207ENST00000587537 MRPS9P82933 396 aaKnown RBP11.69□□□□□ -0.54
CLPTM1-207ENST00000587537 NEDD9Q14511 834 aa11.69□□□□□ -0.54
CLPTM1-207ENST00000587537 ARMCX2Q7L311 632 aa11.69□□□□□ -0.54
CLPTM1-207ENST00000587537 C4orf32Q8N8J7 132 aa11.69□□□□□ -0.54
CLPTM1-207ENST00000587537 RDM1Q8NG50 284 aa11.69□□□□□ -0.54
CLPTM1-207ENST00000587537 ERMNQ8TAM6 284 aa11.69□□□□□ -0.54
CLPTM1-207ENST00000587537 ETNPPLQ8TBG4 499 aa11.69□□□□□ -0.54
CLPTM1-207ENST00000587537 SCFD2Q8WU76 684 aa11.69□□□□□ -0.54
CLPTM1-207ENST00000587537 LENG9Q96B70 501 aa11.69□□□□□ -0.54
CLPTM1-207ENST00000587537 CCDC34Q96HJ3 373 aa11.69□□□□□ -0.54
CLPTM1-207ENST00000587537 TRIM47Q96LD4 638 aa11.69□□□□□ -0.54
CLPTM1-207ENST00000587537 ZNF577Q9BSK1 485 aa11.69□□□□□ -0.54
CLPTM1-207ENST00000587537 KCNH7Q9NS40 1196 aa11.69□□□□□ -0.54
CLPTM1-207ENST00000587537 PCDHA12Q9UN75 941 aa11.69□□□□□ -0.54
CLPTM1-207ENST00000587537 DOCK3Q8IZD9 2030 aa11.69□□□□□ -0.54
CLPTM1-207ENST00000587537 SPATA31C2B4DYI2 1134 aa11.68□□□□□ -0.54
CLPTM1-207ENST00000587537 MBD3O95983 291 aa11.68□□□□□ -0.54
CLPTM1-207ENST00000587537 ITGB5P18084 799 aa11.68□□□□□ -0.54
CLPTM1-207ENST00000587537 MUTP22033 750 aa11.68□□□□□ -0.54
CLPTM1-207ENST00000587537 SFNP31947 248 aa11.68□□□□□ -0.54
CLPTM1-207ENST00000587537 MCM4P33991 863 aa11.68□□□□□ -0.54
CLPTM1-207ENST00000587537 KRT76Q01546 638 aa11.68□□□□□ -0.54
CLPTM1-207ENST00000587537 CEBPZQ03701 1054 aaKnown RBP11.68□□□□□ -0.54
CLPTM1-207ENST00000587537 TTLL4Q14679 1199 aa11.68□□□□□ -0.54
CLPTM1-207ENST00000587537 SKOR2Q2VWA4 1001 aaPredicted RBP11.68□□□□□ -0.54
CLPTM1-207ENST00000587537 FOXD4L6Q3SYB3 417 aaPredicted RBP11.68□□□□□ -0.54
CLPTM1-207ENST00000587537 MFSD14CQ5VZR4 134 aa11.68□□□□□ -0.54
CLPTM1-207ENST00000587537 HAUS3Q68CZ6 603 aa11.68□□□□□ -0.54
CLPTM1-207ENST00000587537 FOXD4L3Q6VB84 417 aaPredicted RBP11.68□□□□□ -0.54
CLPTM1-207ENST00000587537 NEK9Q8TD19 979 aa11.68□□□□□ -0.54
CLPTM1-207ENST00000587537 PXYLP1Q8TE99 480 aa11.68□□□□□ -0.54
CLPTM1-207ENST00000587537 SLC5A5Q92911 643 aa11.68□□□□□ -0.54
CLPTM1-207ENST00000587537 FGD4Q96M96 766 aa11.68□□□□□ -0.54
CLPTM1-207ENST00000587537 SDF4Q9BRK5 362 aa11.68□□□□□ -0.54
CLPTM1-207ENST00000587537 SRRDQ9UH36 339 aa11.68□□□□□ -0.54
CLPTM1-207ENST00000587537 ASTN1O14525 1302 aa11.67□□□□□ -0.54
CLPTM1-207ENST00000587537 RBM47A0AV96 593 aaKnown RBP11.67□□□□□ -0.54
CLPTM1-207ENST00000587537 MSH4O15457 936 aa11.67□□□□□ -0.54
CLPTM1-207ENST00000587537 SLC37A4O43826 429 aa11.67□□□□□ -0.54
CLPTM1-207ENST00000587537 EDIL3O43854 480 aa11.67□□□□□ -0.54
CLPTM1-207ENST00000587537 GAS7O60861 476 aa11.67□□□□□ -0.54
CLPTM1-207ENST00000587537 CMA1P23946 247 aa11.67□□□□□ -0.54
CLPTM1-207ENST00000587537 PPP2R5CQ13362 524 aa11.67□□□□□ -0.54
CLPTM1-207ENST00000587537 LRCH2Q5VUJ6 765 aa11.67□□□□□ -0.54
CLPTM1-207ENST00000587537 IQSEC1Q6DN90 963 aa11.67□□□□□ -0.54
CLPTM1-207ENST00000587537 SMAP1Q8IYB5 467 aaPredicted RBP11.67□□□□□ -0.54
CLPTM1-207ENST00000587537 IGSF22Q8N9C0 903 aa11.67□□□□□ -0.54
CLPTM1-207ENST00000587537 IL31RAQ8NI17 732 aa11.67□□□□□ -0.54
CLPTM1-207ENST00000587537 TEKT3Q9BXF9 490 aa11.67□□□□□ -0.54
CLPTM1-207ENST00000587537 R3HDMLQ9H3Y0 253 aa11.67□□□□□ -0.54
CLPTM1-207ENST00000587537 TTC12Q9H892 705 aaPredicted RBP11.67□□□□□ -0.54
CLPTM1-207ENST00000587537 AGO4Q9HCK5 861 aaKnown RBP11.67□□□□□ -0.54
CLPTM1-207ENST00000587537 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.67□□□□□ -0.54
CLPTM1-207ENST00000587537 FAM13BQ9NYF5 915 aa11.67□□□□□ -0.54
CLPTM1-207ENST00000587537 FBXO2Q9UK22 296 aaPredicted RBP11.67□□□□□ -0.54
CLPTM1-207ENST00000587537 PCDHA7Q9UN72 937 aa11.67□□□□□ -0.54
CLPTM1-207ENST00000587537 MRVI1Q9Y6F6 885 aa11.67□□□□□ -0.54
CLPTM1-207ENST00000587537 KDM3AQ9Y4C1 1321 aa11.66□□□□□ -0.54
CLPTM1-207ENST00000587537 DKC1O60832 514 aaKnown RBP eCLIP11.66□□□□□ -0.54
CLPTM1-207ENST00000587537 PSMD10O75832 226 aa11.66□□□□□ -0.54
CLPTM1-207ENST00000587537 IGHA2P01877 340 aa11.66□□□□□ -0.54
CLPTM1-207ENST00000587537 FLT3LGP49771 235 aa11.66□□□□□ -0.54
CLPTM1-207ENST00000587537 JAK3P52333 1124 aa11.66□□□□□ -0.54
CLPTM1-207ENST00000587537 UBXN2AP68543 259 aa11.66□□□□□ -0.54
CLPTM1-207ENST00000587537 NBR1Q14596 966 aa11.66□□□□□ -0.54
CLPTM1-207ENST00000587537 ZNF746Q6NUN9 644 aaPredicted RBP11.66□□□□□ -0.54
CLPTM1-207ENST00000587537 CCDC73Q6ZRK6 1079 aa11.66□□□□□ -0.54
CLPTM1-207ENST00000587537 SLAIN1Q8ND83 568 aa11.66□□□□□ -0.54
CLPTM1-207ENST00000587537 ZNF296Q8WUU4 475 aaPredicted RBP11.66□□□□□ -0.54
CLPTM1-207ENST00000587537 MRPS27Q92552 414 aaKnown RBP11.66□□□□□ -0.54
CLPTM1-207ENST00000587537 HAS1Q92839 578 aa11.66□□□□□ -0.54
CLPTM1-207ENST00000587537 NT5C3AQ9H0P0 336 aa11.66□□□□□ -0.54
CLPTM1-207ENST00000587537 LRWD1Q9UFC0 647 aa11.66□□□□□ -0.54
CLPTM1-207ENST00000587537 CCDC39Q9UFE4 941 aa11.66□□□□□ -0.54
CLPTM1-207ENST00000587537 USP25Q9UHP3 1055 aa11.66□□□□□ -0.54
CLPTM1-207ENST00000587537 Q9Y3F1 56 aa11.66□□□□□ -0.54
CLPTM1-207ENST00000587537 MCM3APO60318 1980 aa11.65□□□□□ -0.54
CLPTM1-207ENST00000587537 LOXHD1Q8IVV2 1947 aa11.65□□□□□ -0.54
CLPTM1-207ENST00000587537 FAM237AA0A1B0GTK4 181 aa11.65□□□□□ -0.54
CLPTM1-207ENST00000587537 VWA3AA6NCI4 1184 aa11.65□□□□□ -0.54
CLPTM1-207ENST00000587537 WNT7AO00755 349 aa11.65□□□□□ -0.54
CLPTM1-207ENST00000587537 PRPF40AO75400 957 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms