RNA–Protein interactions for RNA: ENST00000587451.2

CACNA1A-208, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-208ENST00000587451 PABPC1P11940 636 aaKnown RBP6.89□□□□□ -1.31
CACNA1A-208ENST00000587451 GTF2F1P35269 517 aaKnown RBP eCLIP6.89□□□□□ -1.31
CACNA1A-208ENST00000587451 MTERF2Q49AM1 385 aa6.89□□□□□ -1.31
CACNA1A-208ENST00000587451 EMC4Q5J8M3 183 aa6.89□□□□□ -1.31
CACNA1A-208ENST00000587451 FRMD5Q7Z6J6 570 aa6.89□□□□□ -1.31
CACNA1A-208ENST00000587451 TTLL6Q8N841 843 aa6.89□□□□□ -1.31
CACNA1A-208ENST00000587451 TP53I13Q8NBR0 393 aaPredicted RBP6.89□□□□□ -1.31
CACNA1A-208ENST00000587451 ARHGEF4Q9NR80 690 aa6.89□□□□□ -1.31
CACNA1A-208ENST00000587451 SIRPGQ9P1W8 387 aa6.89□□□□□ -1.31
CACNA1A-208ENST00000587451 FBXL7Q9UJT9 491 aa6.89□□□□□ -1.31
CACNA1A-208ENST00000587451 A0A0G2JLL6 359 aaPredicted RBP6.88□□□□□ -1.31
CACNA1A-208ENST00000587451 SARSP49591 514 aaKnown RBP6.88□□□□□ -1.31
CACNA1A-208ENST00000587451 GJA9P57773 515 aa6.88□□□□□ -1.31
CACNA1A-208ENST00000587451 RASGRF1Q13972 1273 aa6.88□□□□□ -1.31
CACNA1A-208ENST00000587451 KIZQ2M2Z5 673 aa6.88□□□□□ -1.31
CACNA1A-208ENST00000587451 CYP4F22Q6NT55 531 aa6.88□□□□□ -1.31
CACNA1A-208ENST00000587451 ZDHHC14Q8IZN3 488 aa6.88□□□□□ -1.31
CACNA1A-208ENST00000587451 CARFQ8N187 725 aa6.88□□□□□ -1.31
CACNA1A-208ENST00000587451 LINC00482Q8N8I6 264 aa6.88□□□□□ -1.31
CACNA1A-208ENST00000587451 KYQ8NBH2 561 aa6.88□□□□□ -1.31
CACNA1A-208ENST00000587451 SYT8Q8NBV8 401 aa6.88□□□□□ -1.31
CACNA1A-208ENST00000587451 ZNF526Q8TF50 670 aaPredicted RBP6.88□□□□□ -1.31
CACNA1A-208ENST00000587451 TOE1Q96GM8 510 aaKnown RBP6.88□□□□□ -1.31
CACNA1A-208ENST00000587451 TEPSINQ96N21 525 aa6.88□□□□□ -1.31
CACNA1A-208ENST00000587451 SPATA9Q9BWV2 254 aa6.88□□□□□ -1.31
CACNA1A-208ENST00000587451 CCDC113Q9H0I3 377 aa6.88□□□□□ -1.31
CACNA1A-208ENST00000587451 MSRB2Q9Y3D2 182 aa6.88□□□□□ -1.31
CACNA1A-208ENST00000587451 CCDC85CA6NKD9 419 aa6.87□□□□□ -1.31
CACNA1A-208ENST00000587451 B8ZZF3 427 aa6.87□□□□□ -1.31
CACNA1A-208ENST00000587451 SMAD4Q13485 552 aaKnown RBP6.87□□□□□ -1.31
CACNA1A-208ENST00000587451 SF3A1Q15459 793 aaKnown RBP6.87□□□□□ -1.31
CACNA1A-208ENST00000587451 TRIM48Q8IWZ4 208 aa6.87□□□□□ -1.31
CACNA1A-208ENST00000587451 IFNL3Q8IZI9 196 aa6.87□□□□□ -1.31
CACNA1A-208ENST00000587451 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.87□□□□□ -1.31
CACNA1A-208ENST00000587451 C20orf173Q96LM9 149 aa6.87□□□□□ -1.31
CACNA1A-208ENST00000587451 NOX5Q96PH1 765 aa6.87□□□□□ -1.31
CACNA1A-208ENST00000587451 CDC6Q99741 560 aa6.87□□□□□ -1.31
CACNA1A-208ENST00000587451 GORASP1Q9BQQ3 440 aa6.87□□□□□ -1.31
CACNA1A-208ENST00000587451 SPATA25Q9BR10 227 aa6.87□□□□□ -1.31
CACNA1A-208ENST00000587451 C11orf84Q9BUA3 381 aaPredicted RBP6.87□□□□□ -1.31
CACNA1A-208ENST00000587451 SMOC1Q9H4F8 434 aa6.87□□□□□ -1.31
CACNA1A-208ENST00000587451 DTLQ9NZJ0 730 aa6.87□□□□□ -1.31
CACNA1A-208ENST00000587451 MYOTQ9UBF9 498 aa6.87□□□□□ -1.31
CACNA1A-208ENST00000587451 ADAMTS20P59510 1910 aa6.86□□□□□ -1.31
CACNA1A-208ENST00000587451 CYP7B1O75881 506 aa6.86□□□□□ -1.31
CACNA1A-208ENST00000587451 APPP05067 770 aa6.86□□□□□ -1.31
CACNA1A-208ENST00000587451 SYN1P17600 705 aa6.86□□□□□ -1.31
CACNA1A-208ENST00000587451 GRK2P25098 689 aa6.86□□□□□ -1.31
CACNA1A-208ENST00000587451 GRK3P35626 688 aa6.86□□□□□ -1.31
CACNA1A-208ENST00000587451 SSRP1Q08945 709 aaKnown RBP6.86□□□□□ -1.31
CACNA1A-208ENST00000587451 SPIRE1Q08AE8 756 aa6.86□□□□□ -1.31
CACNA1A-208ENST00000587451 SOGA3Q5TF21 947 aa6.86□□□□□ -1.31
CACNA1A-208ENST00000587451 NT5DC1Q5TFE4 455 aa6.86□□□□□ -1.31
CACNA1A-208ENST00000587451 STYK1Q6J9G0 422 aa6.86□□□□□ -1.31
CACNA1A-208ENST00000587451 ADGRG2Q8IZP9 1017 aa6.86□□□□□ -1.31
CACNA1A-208ENST00000587451 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.86□□□□□ -1.31
CACNA1A-208ENST00000587451 OSBP2Q969R2 916 aa6.86□□□□□ -1.31
CACNA1A-208ENST00000587451 WRNIP1Q96S55 665 aa6.86□□□□□ -1.31
CACNA1A-208ENST00000587451 ALG1Q9BT22 464 aa6.86□□□□□ -1.31
CACNA1A-208ENST00000587451 A0A1B0GTL3 188 aa6.85□□□□□ -1.31
CACNA1A-208ENST00000587451 TCRBV5S2A0A599 114 aa6.85□□□□□ -1.31
CACNA1A-208ENST00000587451 TADA3O75528 432 aa6.85□□□□□ -1.31
CACNA1A-208ENST00000587451 RPL13P26373 211 aaKnown RBP6.85□□□□□ -1.31
CACNA1A-208ENST00000587451 THBS2P35442 1172 aa6.85□□□□□ -1.31
CACNA1A-208ENST00000587451 STAT5AP42229 794 aa6.85□□□□□ -1.31
CACNA1A-208ENST00000587451 GPR85P60893 370 aa6.85□□□□□ -1.31
CACNA1A-208ENST00000587451 LBX2Q6XYB7 198 aa6.85□□□□□ -1.31
CACNA1A-208ENST00000587451 FAM124AQ86V42 546 aa6.85□□□□□ -1.31
CACNA1A-208ENST00000587451 FAM26EQ8N5C1 309 aa6.85□□□□□ -1.31
CACNA1A-208ENST00000587451 CXorf38Q8TB03 319 aa6.85□□□□□ -1.31
CACNA1A-208ENST00000587451 SLC6A20Q9NP91 592 aa6.85□□□□□ -1.31
CACNA1A-208ENST00000587451 FAM47E-STBD1D6RA91 191 aa6.84□□□□□ -1.31
CACNA1A-208ENST00000587451 FOXD2O60548 495 aaPredicted RBP6.84□□□□□ -1.31
CACNA1A-208ENST00000587451 GNAT1P11488 350 aa6.84□□□□□ -1.31
CACNA1A-208ENST00000587451 NAT1P18440 290 aa6.84□□□□□ -1.31
CACNA1A-208ENST00000587451 ITGA1P56199 1179 aa6.84□□□□□ -1.31
CACNA1A-208ENST00000587451 DLX2Q07687 328 aaPredicted RBP6.84□□□□□ -1.31
CACNA1A-208ENST00000587451 SCUBE1Q8IWY4 988 aa6.84□□□□□ -1.31
CACNA1A-208ENST00000587451 CLIC6Q96NY7 704 aa6.84□□□□□ -1.31
CACNA1A-208ENST00000587451 SPATA6Q9NWH7 488 aaPredicted RBP6.84□□□□□ -1.31
CACNA1A-208ENST00000587451 NCANO14594 1321 aa6.83□□□□□ -1.32
CACNA1A-208ENST00000587451 AQP7O14520 342 aa6.83□□□□□ -1.32
CACNA1A-208ENST00000587451 PRRG2O14669 202 aa6.83□□□□□ -1.32
CACNA1A-208ENST00000587451 MSCO60682 206 aa6.83□□□□□ -1.32
CACNA1A-208ENST00000587451 SUMO1P63165 101 aaKnown RBP6.83□□□□□ -1.32
CACNA1A-208ENST00000587451 UBXN11Q5T124 520 aa6.83□□□□□ -1.32
CACNA1A-208ENST00000587451 KCNT2Q6UVM3 1135 aa6.83□□□□□ -1.32
CACNA1A-208ENST00000587451 SPATC1Q76KD6 591 aa6.83□□□□□ -1.32
CACNA1A-208ENST00000587451 MAMDC2Q7Z304 686 aaPredicted RBP6.83□□□□□ -1.32
CACNA1A-208ENST00000587451 LRP10Q7Z4F1 713 aa6.83□□□□□ -1.32
CACNA1A-208ENST00000587451 ARRDC4Q8NCT1 418 aa6.83□□□□□ -1.32
CACNA1A-208ENST00000587451 PIP4K2CQ8TBX8 421 aa6.83□□□□□ -1.32
CACNA1A-208ENST00000587451 TMEM209Q96SK2 561 aa6.83□□□□□ -1.32
CACNA1A-208ENST00000587451 JAM3Q9BX67 310 aa6.83□□□□□ -1.32
CACNA1A-208ENST00000587451 ASH2LQ9UBL3 628 aa6.83□□□□□ -1.32
CACNA1A-208ENST00000587451 PFDN2Q9UHV9 154 aa6.83□□□□□ -1.32
CACNA1A-208ENST00000587451 TRBV23-1A0A0A0MS06 115 aa6.82□□□□□ -1.32
CACNA1A-208ENST00000587451 CELA3BP08861 270 aa6.82□□□□□ -1.32
CACNA1A-208ENST00000587451 KIAA2012Q0VF49 1180 aa6.82□□□□□ -1.32
CACNA1A-208ENST00000587451 NTRK3Q16288 839 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms