RNA–Protein interactions for RNA: ENST00000587451.2

CACNA1A-208, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-208ENST00000587451 AEBP2Q6ZN18 517 aaPredicted RBP26.83■■□□□ 1.89
CACNA1A-208ENST00000587451 CHIC1Q5VXU3 224 aa26.07■■□□□ 1.76
CACNA1A-208ENST00000587451 SENP3Q9H4L4 574 aaPredicted RBP22.98■■□□□ 1.27
CACNA1A-208ENST00000587451 PHF23Q9BUL5 403 aaPredicted RBP22.8■■□□□ 1.24
CACNA1A-208ENST00000587451 FOXD1Q16676 465 aa21.24■□□□□ 0.99
CACNA1A-208ENST00000587451 PLPPR3Q6T4P5 718 aa21.14■□□□□ 0.97
CACNA1A-208ENST00000587451 POTEDQ86YR6 584 aa20.54■□□□□ 0.88
CACNA1A-208ENST00000587451 ADRA2BP18089 450 aa20.2■□□□□ 0.82
CACNA1A-208ENST00000587451 PPP6R1Q9UPN7 881 aa20.19■□□□□ 0.82
CACNA1A-208ENST00000587451 PIAS4Q8N2W9 510 aaPredicted RBP20.06■□□□□ 0.8
CACNA1A-208ENST00000587451 MSH5O43196 834 aa19.83■□□□□ 0.77
CACNA1A-208ENST00000587451 SCAF1Q9H7N4 1312 aaKnown RBP18.69■□□□□ 0.58
CACNA1A-208ENST00000587451 PPP4R3CPQ6ZMV5 832 aa18.54■□□□□ 0.56
CACNA1A-208ENST00000587451 MAPK8IP2Q13387 824 aaPredicted RBP18.36■□□□□ 0.53
CACNA1A-208ENST00000587451 DMRT2Q9Y5R5 561 aa18.25■□□□□ 0.51
CACNA1A-208ENST00000587451 CNKSR2Q8WXI2 1034 aa18.12■□□□□ 0.49
CACNA1A-208ENST00000587451 NCBP3Q53F19 620 aaKnown RBP18.1■□□□□ 0.49
CACNA1A-208ENST00000587451 RNF216Q9NWF9 866 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-208ENST00000587451 KCNA4P22459 653 aa17.78■□□□□ 0.44
CACNA1A-208ENST00000587451 HOXD11P31277 338 aaPredicted RBP17.78■□□□□ 0.44
CACNA1A-208ENST00000587451 NPM3O75607 178 aaKnown RBP17.69■□□□□ 0.42
CACNA1A-208ENST00000587451 DCAF8L1A6NGE4 600 aa17.54■□□□□ 0.4
CACNA1A-208ENST00000587451 CACNB1Q02641 598 aaPredicted RBP17.32■□□□□ 0.36
CACNA1A-208ENST00000587451 DNAJC5BQ9UF47 199 aa17.25■□□□□ 0.35
CACNA1A-208ENST00000587451 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.01■□□□□ 0.31
CACNA1A-208ENST00000587451 SLC4A1APQ9BWU0 796 aaKnown RBP16.97■□□□□ 0.31
CACNA1A-208ENST00000587451 RNF39Q9H2S5 420 aa16.88■□□□□ 0.29
CACNA1A-208ENST00000587451 C1QBPQ07021 282 aaKnown RBP16.73■□□□□ 0.27
CACNA1A-208ENST00000587451 SLC4A2P04920 1241 aa16.72■□□□□ 0.27
CACNA1A-208ENST00000587451 U3KPZ7 1027 aaPredicted RBP16.62■□□□□ 0.25
CACNA1A-208ENST00000587451 FOXD4L1Q9NU39 408 aa16.53■□□□□ 0.24
CACNA1A-208ENST00000587451 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.5■□□□□ 0.23
CACNA1A-208ENST00000587451 HNRNPUL2Q1KMD3 747 aaKnown RBP16.5■□□□□ 0.23
CACNA1A-208ENST00000587451 MYCNP04198 464 aaPredicted RBP16.44■□□□□ 0.22
CACNA1A-208ENST00000587451 APLP2Q06481 763 aa16.43■□□□□ 0.22
CACNA1A-208ENST00000587451 SAMD1Q6SPF0 538 aaPredicted RBP16.39■□□□□ 0.21
CACNA1A-208ENST00000587451 ZBTB22O15209 634 aa16.29■□□□□ 0.2
CACNA1A-208ENST00000587451 CAPN15O75808 1086 aa16.25■□□□□ 0.19
CACNA1A-208ENST00000587451 SPINK5Q9NQ38 1064 aaPredicted RBP16.2■□□□□ 0.18
CACNA1A-208ENST00000587451 EHMT2Q96KQ7 1210 aa16.17■□□□□ 0.18
CACNA1A-208ENST00000587451 ZNF219Q9P2Y4 722 aaPredicted RBP16.16■□□□□ 0.18
CACNA1A-208ENST00000587451 TRHP20396 242 aaPredicted RBP16.1■□□□□ 0.17
CACNA1A-208ENST00000587451 CSRNP3Q8WYN3 585 aa16.04■□□□□ 0.16
CACNA1A-208ENST00000587451 ATXN8OSP0DMR3 200 aa16■□□□□ 0.15
CACNA1A-208ENST00000587451 DSG3P32926 999 aa15.97■□□□□ 0.15
CACNA1A-208ENST00000587451 POTEHQ6S545 545 aa15.93■□□□□ 0.14
CACNA1A-208ENST00000587451 ABCB7O75027 752 aa15.86■□□□□ 0.13
CACNA1A-208ENST00000587451 ATF5Q9Y2D1 282 aaPredicted RBP15.86■□□□□ 0.13
CACNA1A-208ENST00000587451 POLA2Q14181 598 aa15.76■□□□□ 0.11
CACNA1A-208ENST00000587451 ZBTB12Q9Y330 459 aaPredicted RBP15.61■□□□□ 0.09
CACNA1A-208ENST00000587451 FBLN2P98095 1184 aa15.42■□□□□ 0.06
CACNA1A-208ENST00000587451 RBM42Q9BTD8 480 aaKnown RBP15.37■□□□□ 0.05
CACNA1A-208ENST00000587451 OSCARQ8IYS5 282 aa15.23■□□□□ 0.03
CACNA1A-208ENST00000587451 MKRN4PQ13434 485 aaPredicted RBP15.17■□□□□ 0.02
CACNA1A-208ENST00000587451 SPDYE2BA6NHP3 402 aa15.11■□□□□ 0.01
CACNA1A-208ENST00000587451 SPDYE6P0CI01 402 aa15.11■□□□□ 0.01
CACNA1A-208ENST00000587451 SPDYE2Q495Y8 402 aa15.11■□□□□ 0.01
CACNA1A-208ENST00000587451 AKT1S1Q96B36 256 aa15.06■□□□□ 0
CACNA1A-208ENST00000587451 ZNF692Q9BU19 519 aaPredicted RBP14.99□□□□□ -0.01
CACNA1A-208ENST00000587451 SSUH2Q9Y2M2 353 aa14.89□□□□□ -0.03
CACNA1A-208ENST00000587451 REM2Q8IYK8 340 aaPredicted RBP14.86□□□□□ -0.03
CACNA1A-208ENST00000587451 SPDYE4A6NLX3 237 aa14.83□□□□□ -0.04
CACNA1A-208ENST00000587451 PABPN1Q86U42 306 aaKnown RBP eCLIP14.76□□□□□ -0.05
CACNA1A-208ENST00000587451 CHRDL2Q6WN34 429 aa14.74□□□□□ -0.05
CACNA1A-208ENST00000587451 SPDYE1Q8NFV5 336 aaPredicted RBP14.73□□□□□ -0.05
CACNA1A-208ENST00000587451 PITPNM1O00562 1244 aa14.68□□□□□ -0.06
CACNA1A-208ENST00000587451 CLEC11AQ9Y240 323 aa14.65□□□□□ -0.06
CACNA1A-208ENST00000587451 FKBP8Q14318 412 aa14.6□□□□□ -0.07
CACNA1A-208ENST00000587451 SP7Q8TDD2 431 aaPredicted RBP14.57□□□□□ -0.08
CACNA1A-208ENST00000587451 STAG3Q9UJ98 1225 aa14.56□□□□□ -0.08
CACNA1A-208ENST00000587451 PRR29P0C7W0 189 aa14.5□□□□□ -0.09
CACNA1A-208ENST00000587451 PROM2Q8N271 834 aa14.48□□□□□ -0.09
CACNA1A-208ENST00000587451 FXR2P51116 673 aaKnown RBP eCLIP14.46□□□□□ -0.09
CACNA1A-208ENST00000587451 PIP4P2Q8N4L2 257 aa14.45□□□□□ -0.1
CACNA1A-208ENST00000587451 PRKAR2AP13861 404 aaKnown RBP14.34□□□□□ -0.11
CACNA1A-208ENST00000587451 FBXO3Q9UK99 471 aa14.26□□□□□ -0.13
CACNA1A-208ENST00000587451 CHADLQ6NUI6 762 aa14.24□□□□□ -0.13
CACNA1A-208ENST00000587451 PLEKHG5O94827 1062 aa14.2□□□□□ -0.14
CACNA1A-208ENST00000587451 CREBZFQ9NS37 354 aa14.16□□□□□ -0.14
CACNA1A-208ENST00000587451 FARP1Q9Y4F1 1045 aaPredicted RBP14.13□□□□□ -0.15
CACNA1A-208ENST00000587451 HAX1O00165 279 aa14.12□□□□□ -0.15
CACNA1A-208ENST00000587451 MIER1Q8N108 512 aa14.11□□□□□ -0.15
CACNA1A-208ENST00000587451 PLCD3Q8N3E9 789 aa14.1□□□□□ -0.15
CACNA1A-208ENST00000587451 NPM1P06748 294 aaKnown RBP eCLIP14.07□□□□□ -0.16
CACNA1A-208ENST00000587451 ZBTB47Q9UFB7 747 aaPredicted RBP14.04□□□□□ -0.16
CACNA1A-208ENST00000587451 C19orf67A6NJJ6 358 aa13.98□□□□□ -0.17
CACNA1A-208ENST00000587451 VASPP50552 380 aaPredicted RBP13.97□□□□□ -0.17
CACNA1A-208ENST00000587451 MNX1P50219 401 aaPredicted RBP13.95□□□□□ -0.18
CACNA1A-208ENST00000587451 CD44P16070 742 aaKnown RBP13.94□□□□□ -0.18
CACNA1A-208ENST00000587451 PAK3O75914 559 aaPredicted RBP13.93□□□□□ -0.18
CACNA1A-208ENST00000587451 EVX2Q03828 476 aa13.86□□□□□ -0.19
CACNA1A-208ENST00000587451 KLHL34Q8N239 644 aa13.85□□□□□ -0.19
CACNA1A-208ENST00000587451 ZRANB1Q9UGI0 708 aa13.82□□□□□ -0.2
CACNA1A-208ENST00000587451 CLCN6P51797 869 aa13.76□□□□□ -0.21
CACNA1A-208ENST00000587451 ZNF579Q8NAF0 562 aaKnown RBP13.74□□□□□ -0.21
CACNA1A-208ENST00000587451 TSPYL2Q9H2G4 693 aaPredicted RBP13.73□□□□□ -0.21
CACNA1A-208ENST00000587451 FAM212AQ96EL1 285 aa13.72□□□□□ -0.21
CACNA1A-208ENST00000587451 NUBP1P53384 320 aa13.7□□□□□ -0.22
CACNA1A-208ENST00000587451 RASEFQ8IZ41 740 aa13.7□□□□□ -0.22
CACNA1A-208ENST00000587451 IFNLR1Q8IU57 520 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms