RNA–Protein interactions for RNA: ENST00000586636.5

CIRBP-210, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-210ENST00000586636 PTPRSQ13332 1948 aa21.23■□□□□ 0.99
CIRBP-210ENST00000586636 GGPS1O95749 300 aa21.22■□□□□ 0.99
CIRBP-210ENST00000586636 F2P00734 622 aa21.22■□□□□ 0.99
CIRBP-210ENST00000586636 CELF3Q5SZQ8 465 aaKnown RBP21.22■□□□□ 0.99
CIRBP-210ENST00000586636 CASC1Q6TDU7 716 aa21.22■□□□□ 0.99
CIRBP-210ENST00000586636 CTCFLQ8NI51 663 aaPredicted RBP21.22■□□□□ 0.99
CIRBP-210ENST00000586636 PHOSPHO2Q8TCD6 241 aa21.22■□□□□ 0.99
CIRBP-210ENST00000586636 SYMPKQ92797 1274 aaKnown RBP21.22■□□□□ 0.99
CIRBP-210ENST00000586636 ZFP91Q96JP5 570 aaPredicted RBP21.22■□□□□ 0.99
CIRBP-210ENST00000586636 SPATA33Q96N06 139 aa21.22■□□□□ 0.99
CIRBP-210ENST00000586636 HAS3O00219 553 aa21.21■□□□□ 0.99
CIRBP-210ENST00000586636 PPFIA4O75335 1185 aa21.21■□□□□ 0.99
CIRBP-210ENST00000586636 TGFB3P10600 412 aa21.21■□□□□ 0.99
CIRBP-210ENST00000586636 SELPP16109 830 aa21.21■□□□□ 0.99
CIRBP-210ENST00000586636 UBA1P22314 1058 aaKnown RBP21.21■□□□□ 0.99
CIRBP-210ENST00000586636 CCDC85BQ15834 202 aaPredicted RBP21.21■□□□□ 0.99
CIRBP-210ENST00000586636 HSDL1Q3SXM5 330 aa21.21■□□□□ 0.99
CIRBP-210ENST00000586636 LRRC8DQ7L1W4 858 aa21.21■□□□□ 0.99
CIRBP-210ENST00000586636 ZNF654Q8IZM8 581 aa21.21■□□□□ 0.99
CIRBP-210ENST00000586636 DHX38Q92620 1227 aaKnown RBP21.21■□□□□ 0.99
CIRBP-210ENST00000586636 PRDM6Q9NQX0 595 aa21.21■□□□□ 0.99
CIRBP-210ENST00000586636 BAIAP3O94812 1187 aa21.2■□□□□ 0.98
CIRBP-210ENST00000586636 PARNO95453 639 aaKnown RBP21.2■□□□□ 0.98
CIRBP-210ENST00000586636 CA3P07451 260 aa21.2■□□□□ 0.98
CIRBP-210ENST00000586636 HOXD8P13378 290 aaPredicted RBP21.2■□□□□ 0.98
CIRBP-210ENST00000586636 KIF5BP33176 963 aa21.2■□□□□ 0.98
CIRBP-210ENST00000586636 KCNJ6P48051 423 aa21.2■□□□□ 0.98
CIRBP-210ENST00000586636 SP2Q02086 613 aa21.2■□□□□ 0.98
CIRBP-210ENST00000586636 GPKOWQ92917 476 aaPredicted RBP eCLIP21.2■□□□□ 0.985e-13■□□□□ 10.6
CIRBP-210ENST00000586636 MAP3K14Q99558 947 aa21.2■□□□□ 0.98
CIRBP-210ENST00000586636 MYL10Q9BUA6 226 aa21.2■□□□□ 0.98
CIRBP-210ENST00000586636 MLXIPQ9HAP2 919 aa21.2■□□□□ 0.98
CIRBP-210ENST00000586636 LY9Q9HBG7 655 aa21.2■□□□□ 0.98
CIRBP-210ENST00000586636 KIF28PB7ZC32 967 aa21.19■□□□□ 0.98
CIRBP-210ENST00000586636 PRC1O43663 620 aa21.19■□□□□ 0.98
CIRBP-210ENST00000586636 DDAH1O94760 285 aa21.19■□□□□ 0.98
CIRBP-210ENST00000586636 CKBP12277 381 aa21.19■□□□□ 0.98
CIRBP-210ENST00000586636 RBL2Q08999 1139 aa21.19■□□□□ 0.98
CIRBP-210ENST00000586636 PTK7Q13308 1070 aa21.19■□□□□ 0.98
CIRBP-210ENST00000586636 GNPTABQ3T906 1256 aa21.19■□□□□ 0.98
CIRBP-210ENST00000586636 TJAP1Q5JTD0 557 aa21.19■□□□□ 0.98
CIRBP-210ENST00000586636 NFXL1Q6ZNB6 911 aa21.19■□□□□ 0.98
CIRBP-210ENST00000586636 RRP36Q96EU6 259 aaKnown RBP21.19■□□□□ 0.98
CIRBP-210ENST00000586636 MTA3Q9BTC8 594 aa21.19■□□□□ 0.98
CIRBP-210ENST00000586636 SPZ1Q9BXG8 430 aa21.19■□□□□ 0.98
CIRBP-210ENST00000586636 KAT6AQ92794 2004 aa21.18■□□□□ 0.98
CIRBP-210ENST00000586636 MCM5P33992 734 aa21.18■□□□□ 0.98
CIRBP-210ENST00000586636 HERC6Q8IVU3 1022 aa21.18■□□□□ 0.98
CIRBP-210ENST00000586636 LSG1Q9H089 658 aaKnown RBP21.18■□□□□ 0.98
CIRBP-210ENST00000586636 THEGQ9P2T0 379 aa21.18■□□□□ 0.98
CIRBP-210ENST00000586636 SEC63Q9UGP8 760 aaKnown RBP21.18■□□□□ 0.98
CIRBP-210ENST00000586636 SPTBN5Q9NRC6 3674 aaKnown RBP21.17■□□□□ 0.98
CIRBP-210ENST00000586636 CCDC69A6NI79 296 aa21.17■□□□□ 0.98
CIRBP-210ENST00000586636 STAM2O75886 525 aa21.17■□□□□ 0.98
CIRBP-210ENST00000586636 ZNF200P98182 395 aaPredicted RBP21.17■□□□□ 0.98
CIRBP-210ENST00000586636 GPNMBQ14956 572 aa21.17■□□□□ 0.98
CIRBP-210ENST00000586636 CNKSR3Q6P9H4 555 aa21.17■□□□□ 0.98
CIRBP-210ENST00000586636 TMTC2Q8N394 836 aa21.17■□□□□ 0.98
CIRBP-210ENST00000586636 SMARCC2Q8TAQ2 1214 aa21.17■□□□□ 0.98
CIRBP-210ENST00000586636 CUL5Q93034 780 aa21.17■□□□□ 0.98
CIRBP-210ENST00000586636 LZTS2Q9BRK4 669 aa21.17■□□□□ 0.98
CIRBP-210ENST00000586636 FRMPD4Q14CM0 1322 aa21.17■□□□□ 0.98
CIRBP-210ENST00000586636 NOP56O00567 594 aaKnown RBP21.16■□□□□ 0.98
CIRBP-210ENST00000586636 SH2B2O14492 632 aaPredicted RBP21.16■□□□□ 0.98
CIRBP-210ENST00000586636 NBNO60934 754 aa21.16■□□□□ 0.98
CIRBP-210ENST00000586636 CXCL10P02778 98 aa21.16■□□□□ 0.98
CIRBP-210ENST00000586636 SMARCA1P28370 1054 aa21.16■□□□□ 0.98
CIRBP-210ENST00000586636 GNAQP50148 359 aa21.16■□□□□ 0.98
CIRBP-210ENST00000586636 WDR5P61964 334 aaKnown RBP21.16■□□□□ 0.98
CIRBP-210ENST00000586636 MRPS9P82933 396 aaKnown RBP21.16■□□□□ 0.98
CIRBP-210ENST00000586636 MICALL1Q8N3F8 863 aa21.16■□□□□ 0.98
CIRBP-210ENST00000586636 ATXN2LQ8WWM7 1075 aaKnown RBP21.16■□□□□ 0.98
CIRBP-210ENST00000586636 TMEM87BQ96K49 555 aa21.16■□□□□ 0.98
CIRBP-210ENST00000586636 ESYT1Q9BSJ8 1104 aa21.16■□□□□ 0.98
CIRBP-210ENST00000586636 C16orf70Q9BSU1 422 aa21.16■□□□□ 0.98
CIRBP-210ENST00000586636 CERS4Q9HA82 394 aa21.16■□□□□ 0.98
CIRBP-210ENST00000586636 RTEL1Q9NZ71 1219 aa21.16■□□□□ 0.98
CIRBP-210ENST00000586636 SLC27A2O14975 620 aa21.15■□□□□ 0.98
CIRBP-210ENST00000586636 TLL1O43897 1013 aa21.15■□□□□ 0.98
CIRBP-210ENST00000586636 ICAM3P32942 547 aa21.15■□□□□ 0.98
CIRBP-210ENST00000586636 NEDD9Q14511 834 aa21.15■□□□□ 0.98
CIRBP-210ENST00000586636 TRIM71Q2Q1W2 868 aaKnown RBP21.15■□□□□ 0.98
CIRBP-210ENST00000586636 ZNF618Q5T7W0 954 aa21.15■□□□□ 0.98
CIRBP-210ENST00000586636 USP17L6PQ6QN14 398 aa21.15■□□□□ 0.98
CIRBP-210ENST00000586636 WNT8BQ93098 351 aa21.15■□□□□ 0.98
CIRBP-210ENST00000586636 INPP4AQ96PE3 977 aaPredicted RBP21.15■□□□□ 0.98
CIRBP-210ENST00000586636 BCAS3Q9H6U6 928 aa21.15■□□□□ 0.98
CIRBP-210ENST00000586636 PRRC2BQ5JSZ5 2229 aaKnown RBP21.14■□□□□ 0.98
CIRBP-210ENST00000586636 H3BRB1 525 aa21.14■□□□□ 0.97
CIRBP-210ENST00000586636 RFXAPO00287 272 aa21.14■□□□□ 0.97
CIRBP-210ENST00000586636 FIBPO43427 364 aa21.14■□□□□ 0.97
CIRBP-210ENST00000586636 PLEKHA8P1O95397 391 aa21.14■□□□□ 0.97
CIRBP-210ENST00000586636 LGALS2P05162 132 aa21.14■□□□□ 0.97
CIRBP-210ENST00000586636 CALM1P0DP23 149 aa21.14■□□□□ 0.97
CIRBP-210ENST00000586636 CALM2P0DP24 149 aa21.14■□□□□ 0.97
CIRBP-210ENST00000586636 CALM3P0DP25 149 aa21.14■□□□□ 0.97
CIRBP-210ENST00000586636 TAP1Q03518 808 aa21.14■□□□□ 0.97
CIRBP-210ENST00000586636 HIC1Q14526 733 aa21.14■□□□□ 0.97
CIRBP-210ENST00000586636 CREB3L3Q68CJ9 461 aa21.14■□□□□ 0.97
CIRBP-210ENST00000586636 CYFIP1Q7L576 1253 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 280.1 ms