RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 INF2Q27J81 1249 aa21.8■■□□□ 1.08
DDX39A-204ENST00000586558 ANO1Q5XXA6 986 aa21.8■■□□□ 1.08
DDX39A-204ENST00000586558 NEK8Q86SG6 692 aa21.8■■□□□ 1.08
DDX39A-204ENST00000586558 ANKLE1Q8NAG6 615 aa21.8■■□□□ 1.08
DDX39A-204ENST00000586558 LENG1Q96BZ8 264 aaPredicted RBP21.8■■□□□ 1.08
DDX39A-204ENST00000586558 SENP7Q9BQF6 1050 aa21.8■■□□□ 1.08
DDX39A-204ENST00000586558 CENPFP49454 3210 aa21.79■■□□□ 1.08
DDX39A-204ENST00000586558 KIAA1217Q5T5P2 1943 aa21.79■■□□□ 1.08
DDX39A-204ENST00000586558 CYP3A7-CYP3A51PA0A087WV96 503 aa21.79■■□□□ 1.08
DDX39A-204ENST00000586558 FAM86B1E9PN63 330 aa21.79■■□□□ 1.08
DDX39A-204ENST00000586558 GH1P01241 217 aa21.79■■□□□ 1.08
DDX39A-204ENST00000586558 FAM86B2P0C5J1 330 aa21.79■■□□□ 1.08
DDX39A-204ENST00000586558 GCFC2P16383 781 aaKnown RBP21.79■■□□□ 1.08
DDX39A-204ENST00000586558 CYP3A7P24462 503 aa21.79■■□□□ 1.08
DDX39A-204ENST00000586558 U2AF2P26368 475 aaKnown RBP eCLIP21.79■■□□□ 1.087e-9■□□□□ 8.7
DDX39A-204ENST00000586558 RNF180Q86T96 592 aa21.79■■□□□ 1.08
DDX39A-204ENST00000586558 NOSTRINQ8IVI9 506 aa21.79■■□□□ 1.08
DDX39A-204ENST00000586558 GIMAP8Q8ND71 665 aaPredicted RBP21.79■■□□□ 1.08
DDX39A-204ENST00000586558 EMID1Q96A84 441 aaPredicted RBP21.79■■□□□ 1.08
DDX39A-204ENST00000586558 FOXD4L1Q9NU39 408 aa21.79■■□□□ 1.08
DDX39A-204ENST00000586558 KIAA0100Q14667 2235 aaKnown RBP21.78■■□□□ 1.08
DDX39A-204ENST00000586558 IGLV3-22A0A075B6J6 115 aa21.78■■□□□ 1.08
DDX39A-204ENST00000586558 POTEFA5A3E0 1075 aa21.78■■□□□ 1.08
DDX39A-204ENST00000586558 ADAMTS4O75173 837 aa21.78■■□□□ 1.08
DDX39A-204ENST00000586558 PDIA4P13667 645 aaKnown RBP21.78■■□□□ 1.08
DDX39A-204ENST00000586558 UBA1P22314 1058 aaKnown RBP21.78■■□□□ 1.08
DDX39A-204ENST00000586558 CST5P28325 142 aaPredicted RBP21.78■■□□□ 1.08
DDX39A-204ENST00000586558 SEMA3FQ13275 785 aa21.78■■□□□ 1.08
DDX39A-204ENST00000586558 NEDD9Q14511 834 aa21.78■■□□□ 1.08
DDX39A-204ENST00000586558 LY6KQ17RY6 165 aa21.78■■□□□ 1.08
DDX39A-204ENST00000586558 PLA2G4DQ86XP0 818 aa21.78■■□□□ 1.08
DDX39A-204ENST00000586558 KCNH7Q9NS40 1196 aa21.78■■□□□ 1.08
DDX39A-204ENST00000586558 DNM1LO00429 736 aa21.77■■□□□ 1.08
DDX39A-204ENST00000586558 DYNC1LI2O43237 492 aaPredicted RBP21.77■■□□□ 1.08
DDX39A-204ENST00000586558 CAPN15O75808 1086 aa21.77■■□□□ 1.08
DDX39A-204ENST00000586558 PGK1P00558 417 aa21.77■■□□□ 1.08
DDX39A-204ENST00000586558 C6orf222P0C671 652 aaPredicted RBP21.77■■□□□ 1.08
DDX39A-204ENST00000586558 LAMC2Q13753 1193 aa21.77■■□□□ 1.08
DDX39A-204ENST00000586558 BRDTQ58F21 947 aaPredicted RBP21.77■■□□□ 1.08
DDX39A-204ENST00000586558 EARS2Q5JPH6 523 aaKnown RBP21.77■■□□□ 1.08
DDX39A-204ENST00000586558 TMEM63BQ5T3F8 832 aa21.77■■□□□ 1.08
DDX39A-204ENST00000586558 GJC2Q5T442 439 aaPredicted RBP21.77■■□□□ 1.08
DDX39A-204ENST00000586558 PPP4R3AQ6IN85 833 aa21.77■■□□□ 1.08
DDX39A-204ENST00000586558 DHX37Q8IY37 1157 aaKnown RBP21.77■■□□□ 1.08
DDX39A-204ENST00000586558 OR6J1Q8NGC5 347 aa21.77■■□□□ 1.08
DDX39A-204ENST00000586558 CYP2W1Q8TAV3 490 aa21.77■■□□□ 1.08
DDX39A-204ENST00000586558 MBOAT7Q96N66 472 aa21.77■■□□□ 1.08
DDX39A-204ENST00000586558 FRMPD3Q5JV73 1810 aa21.76■■□□□ 1.07
DDX39A-204ENST00000586558 KBTBD13C9JR72 458 aa21.76■■□□□ 1.07
DDX39A-204ENST00000586558 EDIL3O43854 480 aa21.76■■□□□ 1.07
DDX39A-204ENST00000586558 GGPS1O95749 300 aa21.76■■□□□ 1.07
DDX39A-204ENST00000586558 SYT1P21579 422 aa21.76■■□□□ 1.07
DDX39A-204ENST00000586558 CPT1AP50416 773 aa21.76■■□□□ 1.07
DDX39A-204ENST00000586558 SOX10P56693 466 aa21.76■■□□□ 1.07
DDX39A-204ENST00000586558 ARHGAP1Q07960 439 aa21.76■■□□□ 1.07
DDX39A-204ENST00000586558 LRRC41Q15345 812 aa21.76■■□□□ 1.07
DDX39A-204ENST00000586558 FSCN1Q16658 493 aaKnown RBP21.76■■□□□ 1.07
DDX39A-204ENST00000586558 LETM2Q2VYF4 491 aa21.76■■□□□ 1.07
DDX39A-204ENST00000586558 Q4G0T1 1027 aa21.76■■□□□ 1.07
DDX39A-204ENST00000586558 PRR16Q569H4 304 aa21.76■■□□□ 1.07
DDX39A-204ENST00000586558 CELF3Q5SZQ8 465 aaKnown RBP21.76■■□□□ 1.07
DDX39A-204ENST00000586558 MCTP1Q6DN14 999 aa21.76■■□□□ 1.07
DDX39A-204ENST00000586558 KLHDC9Q8NEP7 349 aa21.76■■□□□ 1.07
DDX39A-204ENST00000586558 TSEN34Q9BSV6 310 aaKnown RBP21.76■■□□□ 1.07
DDX39A-204ENST00000586558 MYH7BA7E2Y1 1941 aa21.75■■□□□ 1.07
DDX39A-204ENST00000586558 FAM205CA6NFA0 338 aa21.75■■□□□ 1.07
DDX39A-204ENST00000586558 KIF28PB7ZC32 967 aa21.75■■□□□ 1.07
DDX39A-204ENST00000586558 KCNA2P16389 499 aa21.75■■□□□ 1.07
DDX39A-204ENST00000586558 EN2P19622 333 aaPredicted RBP21.75■■□□□ 1.07
DDX39A-204ENST00000586558 TRAPPC10P48553 1259 aa21.75■■□□□ 1.07
DDX39A-204ENST00000586558 SP2Q02086 613 aa21.75■■□□□ 1.07
DDX39A-204ENST00000586558 MYSM1Q5VVJ2 828 aa21.75■■□□□ 1.07
DDX39A-204ENST00000586558 METTL7BQ6UX53 244 aa21.75■■□□□ 1.07
DDX39A-204ENST00000586558 PCSK9Q8NBP7 692 aaKnown RBP21.75■■□□□ 1.07
DDX39A-204ENST00000586558 COPS5Q92905 334 aa21.75■■□□□ 1.07
DDX39A-204ENST00000586558 LENG9Q96B70 501 aa21.75■■□□□ 1.07
DDX39A-204ENST00000586558 AGO4Q9HCK5 861 aaKnown RBP21.75■■□□□ 1.07
DDX39A-204ENST00000586558 NFASCO94856 1347 aa21.75■■□□□ 1.07
DDX39A-204ENST00000586558 VPS37CA5D8V6 355 aaPredicted RBP21.74■■□□□ 1.07
DDX39A-204ENST00000586558 A6NJR5 290 aa21.74■■□□□ 1.07
DDX39A-204ENST00000586558 CTAGE5O15320 804 aa21.74■■□□□ 1.07
DDX39A-204ENST00000586558 ZEB2O60315 1214 aa21.74■■□□□ 1.07
DDX39A-204ENST00000586558 TDP2O95551 362 aa21.74■■□□□ 1.07
DDX39A-204ENST00000586558 ARP10275 920 aa21.74■■□□□ 1.07
DDX39A-204ENST00000586558 GNASQ5JWF2 1037 aa21.74■■□□□ 1.07
DDX39A-204ENST00000586558 PPTC7Q8NI37 304 aa21.74■■□□□ 1.07
DDX39A-204ENST00000586558 MLXIPQ9HAP2 919 aa21.74■■□□□ 1.07
DDX39A-204ENST00000586558 DDX25Q9UHL0 483 aaKnown RBP21.74■■□□□ 1.07
DDX39A-204ENST00000586558 NOL7Q9UMY1 257 aaKnown RBP21.74■■□□□ 1.07
DDX39A-204ENST00000586558 MOXD2PA6NHM9 499 aa21.73■■□□□ 1.07
DDX39A-204ENST00000586558 IPO5O00410 1097 aaKnown RBP21.73■■□□□ 1.07
DDX39A-204ENST00000586558 CCNT1O60563 726 aaKnown RBP21.73■■□□□ 1.07
DDX39A-204ENST00000586558 FARP2O94887 1054 aaPredicted RBP21.73■■□□□ 1.07
DDX39A-204ENST00000586558 MYCNP04198 464 aaPredicted RBP21.73■■□□□ 1.07
DDX39A-204ENST00000586558 ORC2Q13416 577 aaPredicted RBP21.73■■□□□ 1.07
DDX39A-204ENST00000586558 CCSAPQ6IQ19 270 aaPredicted RBP21.73■■□□□ 1.07
DDX39A-204ENST00000586558 BRAPQ7Z569 592 aa21.73■■□□□ 1.07
DDX39A-204ENST00000586558 SPATA33Q96N06 139 aa21.73■■□□□ 1.07
DDX39A-204ENST00000586558 SDF4Q9BRK5 362 aa21.73■■□□□ 1.07
DDX39A-204ENST00000586558 ZNF577Q9BSK1 485 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms