RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 ADCYAP1R1P41586 468 aa15.45■□□□□ 0.06
VMP1-203ENST00000586245 ORC2Q13416 577 aaPredicted RBP15.45■□□□□ 0.06
VMP1-203ENST00000586245 CCDC144BQ3MJ40 725 aa15.45■□□□□ 0.06
VMP1-203ENST00000586245 Q4G0T1 1027 aa15.45■□□□□ 0.06
VMP1-203ENST00000586245 TRPV1Q8NER1 839 aa15.45■□□□□ 0.06
VMP1-203ENST00000586245 CYP2W1Q8TAV3 490 aa15.45■□□□□ 0.06
VMP1-203ENST00000586245 MBOAT7Q96N66 472 aa15.45■□□□□ 0.06
VMP1-203ENST00000586245 MCOLN1Q9GZU1 580 aa15.45■□□□□ 0.06
VMP1-203ENST00000586245 CHMP5Q9NZZ3 219 aa15.45■□□□□ 0.06
VMP1-203ENST00000586245 ATP6V1DQ9Y5K8 247 aa15.45■□□□□ 0.06
VMP1-203ENST00000586245 MCM3APO60318 1980 aa15.45■□□□□ 0.06
VMP1-203ENST00000586245 NKRFO15226 690 aaKnown RBP eCLIP15.44■□□□□ 0.06
VMP1-203ENST00000586245 SEPT4O43236 478 aa15.44■□□□□ 0.06
VMP1-203ENST00000586245 NEMFO60524 1076 aa15.44■□□□□ 0.06
VMP1-203ENST00000586245 ARP10275 920 aa15.44■□□□□ 0.06
VMP1-203ENST00000586245 CCND3P30281 292 aaPredicted RBP15.44■□□□□ 0.06
VMP1-203ENST00000586245 TOB1P50616 345 aaPredicted RBP15.44■□□□□ 0.06
VMP1-203ENST00000586245 TNFAIP2Q03169 654 aa15.44■□□□□ 0.06
VMP1-203ENST00000586245 ZNF174Q15697 407 aa15.44■□□□□ 0.06
VMP1-203ENST00000586245 ZNF396Q96N95 335 aaPredicted RBP15.44■□□□□ 0.06
VMP1-203ENST00000586245 ZNF577Q9BSK1 485 aa15.44■□□□□ 0.06
VMP1-203ENST00000586245 KCNH7Q9NS40 1196 aa15.44■□□□□ 0.06
VMP1-203ENST00000586245 ZDHHC9Q9Y397 364 aa15.44■□□□□ 0.06
VMP1-203ENST00000586245 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.43■□□□□ 0.06
VMP1-203ENST00000586245 WNT7AO00755 349 aa15.43■□□□□ 0.06
VMP1-203ENST00000586245 SLC37A4O43826 429 aa15.43■□□□□ 0.06
VMP1-203ENST00000586245 BAG4O95429 457 aaKnown RBP15.43■□□□□ 0.06
VMP1-203ENST00000586245 SEMA3FQ13275 785 aa15.43■□□□□ 0.06
VMP1-203ENST00000586245 NBR1Q14596 966 aa15.43■□□□□ 0.06
VMP1-203ENST00000586245 LY6KQ17RY6 165 aa15.43■□□□□ 0.06
VMP1-203ENST00000586245 FAM173BQ6P4H8 233 aa15.43■□□□□ 0.06
VMP1-203ENST00000586245 GIMAP8Q8ND71 665 aaPredicted RBP15.43■□□□□ 0.06
VMP1-203ENST00000586245 LENG9Q96B70 501 aa15.43■□□□□ 0.06
VMP1-203ENST00000586245 AGO4Q9HCK5 861 aaKnown RBP15.43■□□□□ 0.06
VMP1-203ENST00000586245 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.43■□□□□ 0.06
VMP1-203ENST00000586245 PKD2L1Q9P0L9 805 aa15.43■□□□□ 0.06
VMP1-203ENST00000586245 DDX41Q9UJV9 622 aaKnown RBP15.43■□□□□ 0.06
VMP1-203ENST00000586245 CEP131Q9UPN4 1083 aa15.43■□□□□ 0.06
VMP1-203ENST00000586245 PCDHB6Q9Y5E3 794 aa15.43■□□□□ 0.06
VMP1-203ENST00000586245 IPO5O00410 1097 aaKnown RBP15.42■□□□□ 0.06
VMP1-203ENST00000586245 TBX3O15119 743 aa15.42■□□□□ 0.06
VMP1-203ENST00000586245 MSH4O15457 936 aa15.42■□□□□ 0.06
VMP1-203ENST00000586245 MSCO60682 206 aa15.42■□□□□ 0.06
VMP1-203ENST00000586245 ARIH2O95376 493 aa15.42■□□□□ 0.06
VMP1-203ENST00000586245 BMP15O95972 392 aa15.42■□□□□ 0.06
VMP1-203ENST00000586245 RARBP10826 455 aa15.42■□□□□ 0.06
VMP1-203ENST00000586245 UBA1P22314 1058 aaKnown RBP15.42■□□□□ 0.06
VMP1-203ENST00000586245 NEDD9Q14511 834 aa15.42■□□□□ 0.06
VMP1-203ENST00000586245 CALCRLQ16602 461 aa15.42■□□□□ 0.06
VMP1-203ENST00000586245 FOXD4L6Q3SYB3 417 aaPredicted RBP15.42■□□□□ 0.06
VMP1-203ENST00000586245 DUSP28Q4G0W2 176 aa15.42■□□□□ 0.06
VMP1-203ENST00000586245 CCDC62Q6P9F0 684 aa15.42■□□□□ 0.06
VMP1-203ENST00000586245 FOXD4L3Q6VB84 417 aaPredicted RBP15.42■□□□□ 0.06
VMP1-203ENST00000586245 POTEDQ86YR6 584 aa15.42■□□□□ 0.06
VMP1-203ENST00000586245 DHX37Q8IY37 1157 aaKnown RBP15.42■□□□□ 0.06
VMP1-203ENST00000586245 SLFN12Q8IYM2 578 aa15.42■□□□□ 0.06
VMP1-203ENST00000586245 ARMC5Q96C12 935 aa15.42■□□□□ 0.06
VMP1-203ENST00000586245 ZNF333Q96JL9 665 aa15.42■□□□□ 0.06
VMP1-203ENST00000586245 SENP7Q9BQF6 1050 aa15.42■□□□□ 0.06
VMP1-203ENST00000586245 SDF4Q9BRK5 362 aa15.42■□□□□ 0.06
VMP1-203ENST00000586245 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.42■□□□□ 0.06
VMP1-203ENST00000586245 TBC1D22BQ9NU19 505 aa15.42■□□□□ 0.06
VMP1-203ENST00000586245 DDX20Q9UHI6 824 aaKnown RBP15.42■□□□□ 0.06
VMP1-203ENST00000586245 TCEAL9Q9UHQ7 104 aa15.42■□□□□ 0.06
VMP1-203ENST00000586245 KIAA1217Q5T5P2 1943 aa15.41■□□□□ 0.06
VMP1-203ENST00000586245 GGPS1O95749 300 aa15.41■□□□□ 0.06
VMP1-203ENST00000586245 MYCP01106 439 aaPredicted RBP15.41■□□□□ 0.06
VMP1-203ENST00000586245 GH1P01241 217 aa15.41■□□□□ 0.06
VMP1-203ENST00000586245 CCL5P13501 91 aa15.41■□□□□ 0.06
VMP1-203ENST00000586245 KCNA2P16389 499 aa15.41■□□□□ 0.06
VMP1-203ENST00000586245 SMPD1P17405 629 aa15.41■□□□□ 0.06
VMP1-203ENST00000586245 MTFR1Q15390 333 aa15.41■□□□□ 0.06
VMP1-203ENST00000586245 ATL3Q6DD88 541 aa15.41■□□□□ 0.06
VMP1-203ENST00000586245 OR6J1Q8NGC5 347 aa15.41■□□□□ 0.06
VMP1-203ENST00000586245 ETNPPLQ8TBG4 499 aa15.41■□□□□ 0.06
VMP1-203ENST00000586245 FAM20AQ96MK3 541 aa15.41■□□□□ 0.06
VMP1-203ENST00000586245 AP5M1Q9H0R1 490 aa15.41■□□□□ 0.06
VMP1-203ENST00000586245 RNF208Q9H0X6 261 aa15.41■□□□□ 0.06
VMP1-203ENST00000586245 UNC93B1Q9H1C4 597 aa15.41■□□□□ 0.06
VMP1-203ENST00000586245 MLXIPQ9HAP2 919 aa15.41■□□□□ 0.06
VMP1-203ENST00000586245 SPC25Q9HBM1 224 aa15.41■□□□□ 0.06
VMP1-203ENST00000586245 KCNMB3Q9NPA1 279 aa15.41■□□□□ 0.06
VMP1-203ENST00000586245 Q9Y3F1 56 aa15.41■□□□□ 0.06
VMP1-203ENST00000586245 NFASCO94856 1347 aa15.41■□□□□ 0.06
VMP1-203ENST00000586245 LAD1O00515 517 aa15.4■□□□□ 0.06
VMP1-203ENST00000586245 ATP9AO75110 1047 aa15.4■□□□□ 0.06
VMP1-203ENST00000586245 DUSP11O75319 330 aaKnown RBP15.4■□□□□ 0.06
VMP1-203ENST00000586245 OR52Z1P0C646 297 aa15.4■□□□□ 0.06
VMP1-203ENST00000586245 SP2Q02086 613 aa15.4■□□□□ 0.06
VMP1-203ENST00000586245 PTGDRQ13258 359 aa15.4■□□□□ 0.06
VMP1-203ENST00000586245 LAMC2Q13753 1193 aa15.4■□□□□ 0.06
VMP1-203ENST00000586245 SF3A1Q15459 793 aaKnown RBP15.4■□□□□ 0.06
VMP1-203ENST00000586245 CELF3Q5SZQ8 465 aaKnown RBP15.4■□□□□ 0.06
VMP1-203ENST00000586245 GJC2Q5T442 439 aaPredicted RBP15.4■□□□□ 0.06
VMP1-203ENST00000586245 LRCH2Q5VUJ6 765 aa15.4■□□□□ 0.06
VMP1-203ENST00000586245 ANO1Q5XXA6 986 aa15.4■□□□□ 0.06
VMP1-203ENST00000586245 CYFIP1Q7L576 1253 aa15.4■□□□□ 0.06
VMP1-203ENST00000586245 TLK2Q86UE8 772 aa15.4■□□□□ 0.06
VMP1-203ENST00000586245 COPS5Q92905 334 aa15.4■□□□□ 0.06
VMP1-203ENST00000586245 SLC5A5Q92911 643 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms