RNA–Protein interactions for RNA: ENST00000586057.5

TIMP2-204, Transcript of TIMP metallopeptidase inhibitor 2, humanhuman

TSL 1 (best) BASIC

Gene TIMP2, Length 3,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2-204ENST00000586057 ZNF513Q8N8E2 541 aaPredicted RBP11.38□□□□□ -0.59
TIMP2-204ENST00000586057 UPF1Q92900 1129 aaKnown RBP eCLIP11.38□□□□□ -0.597e-14■■■■■ 61.9
TIMP2-204ENST00000586057 ZNRF3Q9ULT6 936 aa11.38□□□□□ -0.59
TIMP2-204ENST00000586057 CERKLQ49MI3 558 aaPredicted RBP11.37□□□□□ -0.59
TIMP2-204ENST00000586057 KCTD1Q719H9 257 aa11.37□□□□□ -0.59
TIMP2-204ENST00000586057 SND1Q7KZF4 910 aaKnown RBP eCLIP11.37□□□□□ -0.596e-8■■■□□ 16.8
TIMP2-204ENST00000586057 TCP11Q8WWU5 503 aa11.37□□□□□ -0.59
TIMP2-204ENST00000586057 SHISA4Q96DD7 197 aa11.37□□□□□ -0.59
TIMP2-204ENST00000586057 POLR3EQ9NVU0 708 aa11.37□□□□□ -0.59
TIMP2-204ENST00000586057 RPS6KL1Q9Y6S9 549 aa11.37□□□□□ -0.59
TIMP2-204ENST00000586057 ADAMTS3O15072 1205 aa11.37□□□□□ -0.59
TIMP2-204ENST00000586057 PRPF3O43395 683 aaKnown RBP11.37□□□□□ -0.59
TIMP2-204ENST00000586057 EPB41P11171 864 aaKnown RBP11.37□□□□□ -0.59
TIMP2-204ENST00000586057 SCG2P13521 617 aa11.37□□□□□ -0.59
TIMP2-204ENST00000586057 SHMT1P34896 483 aa11.37□□□□□ -0.59
TIMP2-204ENST00000586057 ATP1A2P50993 1020 aa11.37□□□□□ -0.59
TIMP2-204ENST00000586057 FUT2Q10981 343 aa11.37□□□□□ -0.59
TIMP2-204ENST00000586057 SLC5A9Q2M3M2 681 aa11.37□□□□□ -0.59
TIMP2-204ENST00000586057 EARS2Q5JPH6 523 aaKnown RBP11.37□□□□□ -0.59
TIMP2-204ENST00000586057 PIK3AP1Q6ZUJ8 805 aa11.37□□□□□ -0.59
TIMP2-204ENST00000586057 SH3BP5LQ7L8J4 393 aa11.37□□□□□ -0.59
TIMP2-204ENST00000586057 OR8K1Q8NGG5 319 aa11.37□□□□□ -0.59
TIMP2-204ENST00000586057 CPLX3Q8WVH0 158 aa11.37□□□□□ -0.59
TIMP2-204ENST00000586057 NFE2L3Q9Y4A8 694 aa11.37□□□□□ -0.59
TIMP2-204ENST00000586057 PCDHB6Q9Y5E3 794 aa11.37□□□□□ -0.59
TIMP2-204ENST00000586057 CNTNAP5Q8WYK1 1306 aa11.37□□□□□ -0.59
TIMP2-204ENST00000586057 C10orf71Q711Q0 1435 aa11.37□□□□□ -0.59
TIMP2-204ENST00000586057 RAB27AP51159 221 aa11.37□□□□□ -0.59
TIMP2-204ENST00000586057 PNOCQ13519 176 aa11.37□□□□□ -0.59
TIMP2-204ENST00000586057 SEPT2Q15019 361 aa11.37□□□□□ -0.59
TIMP2-204ENST00000586057 ZNF174Q15697 407 aa11.37□□□□□ -0.59
TIMP2-204ENST00000586057 ZYXQ15942 572 aaKnown RBP11.37□□□□□ -0.59
TIMP2-204ENST00000586057 CCDC70Q6NSX1 233 aa11.37□□□□□ -0.59
TIMP2-204ENST00000586057 RPUSD2Q8IZ73 545 aaKnown RBP11.37□□□□□ -0.59
TIMP2-204ENST00000586057 MTMR4Q9NYA4 1195 aa11.37□□□□□ -0.59
TIMP2-204ENST00000586057 MAD2L2Q9UI95 211 aa11.37□□□□□ -0.59
TIMP2-204ENST00000586057 SERPINA10Q9UK55 444 aa11.37□□□□□ -0.59
TIMP2-204ENST00000586057 MYH15Q9Y2K3 1946 aa11.36□□□□□ -0.59
TIMP2-204ENST00000586057 KRT2P35908 639 aa11.36□□□□□ -0.59
TIMP2-204ENST00000586057 TGFB2P61812 414 aa11.36□□□□□ -0.59
TIMP2-204ENST00000586057 CKAP4Q07065 602 aaKnown RBP11.36□□□□□ -0.59
TIMP2-204ENST00000586057 ACRBPQ8NEB7 543 aa11.36□□□□□ -0.59
TIMP2-204ENST00000586057 MMS19Q96T76 1030 aa11.36□□□□□ -0.59
TIMP2-204ENST00000586057 HAUS2Q9NVX0 235 aa11.36□□□□□ -0.59
TIMP2-204ENST00000586057 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.36□□□□□ -0.59
TIMP2-204ENST00000586057 PI4KBQ9UBF8 816 aa11.36□□□□□ -0.59
TIMP2-204ENST00000586057 STK36Q9NRP7 1315 aa11.36□□□□□ -0.59
TIMP2-204ENST00000586057 CYTH3O43739 400 aa11.36□□□□□ -0.59
TIMP2-204ENST00000586057 CIAPIN1Q6FI81 312 aa11.36□□□□□ -0.59
TIMP2-204ENST00000586057 TTBK2Q6IQ55 1244 aa11.36□□□□□ -0.59
TIMP2-204ENST00000586057 ARHGAP27Q6ZUM4 889 aa11.36□□□□□ -0.59
TIMP2-204ENST00000586057 TRAPPC11Q7Z392 1133 aa11.36□□□□□ -0.59
TIMP2-204ENST00000586057 SPICE1Q8N0Z3 855 aa11.36□□□□□ -0.59
TIMP2-204ENST00000586057 KLHL23Q8NBE8 558 aa11.36□□□□□ -0.59
TIMP2-204ENST00000586057 RASSF8Q8NHQ8 419 aa11.36□□□□□ -0.59
TIMP2-204ENST00000586057 ARL8AQ96BM9 186 aa11.36□□□□□ -0.59
TIMP2-204ENST00000586057 PIGSQ96S52 555 aa11.36□□□□□ -0.59
TIMP2-204ENST00000586057 CCT8L2Q96SF2 557 aa11.36□□□□□ -0.59
TIMP2-204ENST00000586057 PSMD1Q99460 953 aa11.36□□□□□ -0.59
TIMP2-204ENST00000586057 TMEM39BQ9GZU3 492 aa11.36□□□□□ -0.59
TIMP2-204ENST00000586057 DNAJC18Q9H819 358 aa11.36□□□□□ -0.59
TIMP2-204ENST00000586057 SNAP25P60880 206 aa11.36□□□□□ -0.59
TIMP2-204ENST00000586057 RBL2Q08999 1139 aa11.36□□□□□ -0.59
TIMP2-204ENST00000586057 PPP2R5BQ15173 497 aa11.36□□□□□ -0.59
TIMP2-204ENST00000586057 TBC1D10BQ4KMP7 808 aaPredicted RBP11.36□□□□□ -0.59
TIMP2-204ENST00000586057 CCDC84Q86UT8 332 aaPredicted RBP11.36□□□□□ -0.59
TIMP2-204ENST00000586057 DRAXINQ8NBI3 349 aaPredicted RBP11.36□□□□□ -0.59
TIMP2-204ENST00000586057 AENQ8WTP8 325 aaKnown RBP11.36□□□□□ -0.59
TIMP2-204ENST00000586057 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.36□□□□□ -0.59
TIMP2-204ENST00000586057 NFKBIEO00221 500 aa11.35□□□□□ -0.59
TIMP2-204ENST00000586057 BUB1BO60566 1050 aaPredicted RBP11.35□□□□□ -0.59
TIMP2-204ENST00000586057 ABL1P00519 1130 aa11.35□□□□□ -0.59
TIMP2-204ENST00000586057 EGFRP00533 1210 aa11.35□□□□□ -0.59
TIMP2-204ENST00000586057 ZNF18P17022 549 aa11.35□□□□□ -0.59
TIMP2-204ENST00000586057 NR1I3Q14994 352 aa11.35□□□□□ -0.59
TIMP2-204ENST00000586057 CCDC178Q5BJE1 867 aa11.35□□□□□ -0.59
TIMP2-204ENST00000586057 TTMPQ5BVD1 217 aa11.35□□□□□ -0.59
TIMP2-204ENST00000586057 CCDC181Q5TID7 509 aa11.35□□□□□ -0.59
TIMP2-204ENST00000586057 SAMD7Q7Z3H4 446 aa11.35□□□□□ -0.59
TIMP2-204ENST00000586057 NLRP14Q86W24 1093 aa11.35□□□□□ -0.59
TIMP2-204ENST00000586057 C3orf20Q8ND61 904 aa11.35□□□□□ -0.59
TIMP2-204ENST00000586057 NSMCE1Q8WV22 266 aa11.35□□□□□ -0.59
TIMP2-204ENST00000586057 CCDC47Q96A33 483 aaKnown RBP11.35□□□□□ -0.59
TIMP2-204ENST00000586057 SPAG5Q96R06 1193 aa11.35□□□□□ -0.59
TIMP2-204ENST00000586057 NUP88Q99567 741 aaPredicted RBP11.35□□□□□ -0.59
TIMP2-204ENST00000586057 SLC39A2Q9NP94 309 aa11.35□□□□□ -0.59
TIMP2-204ENST00000586057 SCN9AQ15858 1988 aa11.35□□□□□ -0.59
TIMP2-204ENST00000586057 SPDYE2BA6NHP3 402 aa11.35□□□□□ -0.59
TIMP2-204ENST00000586057 HSF2BPO75031 334 aa11.35□□□□□ -0.59
TIMP2-204ENST00000586057 PPP1R37O75864 691 aa11.35□□□□□ -0.59
TIMP2-204ENST00000586057 GH2P01242 217 aa11.35□□□□□ -0.59
TIMP2-204ENST00000586057 SPDYE6P0CI01 402 aa11.35□□□□□ -0.59
TIMP2-204ENST00000586057 NAPAP54920 295 aa11.35□□□□□ -0.59
TIMP2-204ENST00000586057 HDLBPQ00341 1268 aaKnown RBP11.35□□□□□ -0.59
TIMP2-204ENST00000586057 GRIN1Q05586 938 aa11.35□□□□□ -0.59
TIMP2-204ENST00000586057 GABPAQ06546 454 aa11.35□□□□□ -0.59
TIMP2-204ENST00000586057 GRM4Q14833 912 aa11.35□□□□□ -0.59
TIMP2-204ENST00000586057 SLC35G1Q2M3R5 365 aa11.35□□□□□ -0.59
TIMP2-204ENST00000586057 ACCSLQ4AC99 568 aa11.35□□□□□ -0.59
TIMP2-204ENST00000586057 ALS2CLQ60I27 953 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms