RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 ZSCAN16Q9H4T2 348 aaPredicted RBP16.56■□□□□ 0.24
SCAMP4-209ENST00000585335 DDX25Q9UHL0 483 aaKnown RBP16.56■□□□□ 0.24
SCAMP4-209ENST00000585335 Q9Y3F1 56 aa16.56■□□□□ 0.24
SCAMP4-209ENST00000585335 MYH7BA7E2Y1 1941 aa16.56■□□□□ 0.24
SCAMP4-209ENST00000585335 KIAA1217Q5T5P2 1943 aa16.56■□□□□ 0.24
SCAMP4-209ENST00000585335 CYP3A7-CYP3A51PA0A087WV96 503 aa16.55■□□□□ 0.24
SCAMP4-209ENST00000585335 KIF28PB7ZC32 967 aa16.55■□□□□ 0.24
SCAMP4-209ENST00000585335 MARCH6O60337 910 aa16.55■□□□□ 0.24
SCAMP4-209ENST00000585335 RGS20O76081 388 aa16.55■□□□□ 0.24
SCAMP4-209ENST00000585335 GH1P01241 217 aa16.55■□□□□ 0.24
SCAMP4-209ENST00000585335 GJB1P08034 283 aa16.55■□□□□ 0.24
SCAMP4-209ENST00000585335 CYP3A7P24462 503 aa16.55■□□□□ 0.24
SCAMP4-209ENST00000585335 ORC2Q13416 577 aaPredicted RBP16.55■□□□□ 0.24
SCAMP4-209ENST00000585335 Q4G0T1 1027 aa16.55■□□□□ 0.24
SCAMP4-209ENST00000585335 RILPL1Q5EBL4 403 aa16.55■□□□□ 0.24
SCAMP4-209ENST00000585335 EARS2Q5JPH6 523 aaKnown RBP16.55■□□□□ 0.24
SCAMP4-209ENST00000585335 TLK2Q86UE8 772 aa16.55■□□□□ 0.24
SCAMP4-209ENST00000585335 DEFB118Q96PH6 123 aa16.55■□□□□ 0.24
SCAMP4-209ENST00000585335 SENP7Q9BQF6 1050 aa16.55■□□□□ 0.24
SCAMP4-209ENST00000585335 SDF4Q9BRK5 362 aa16.55■□□□□ 0.24
SCAMP4-209ENST00000585335 XPNPEP3Q9NQH7 507 aa16.55■□□□□ 0.24
SCAMP4-209ENST00000585335 KCNH7Q9NS40 1196 aa16.55■□□□□ 0.24
SCAMP4-209ENST00000585335 DDX41Q9UJV9 622 aaKnown RBP16.55■□□□□ 0.24
SCAMP4-209ENST00000585335 MTMR6Q9Y217 621 aa16.55■□□□□ 0.24
SCAMP4-209ENST00000585335 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.54■□□□□ 0.24
SCAMP4-209ENST00000585335 FAM205CA6NFA0 338 aa16.54■□□□□ 0.24
SCAMP4-209ENST00000585335 FAM86B1E9PN63 330 aa16.54■□□□□ 0.24
SCAMP4-209ENST00000585335 TDP2O95551 362 aa16.54■□□□□ 0.24
SCAMP4-209ENST00000585335 FAM86B2P0C5J1 330 aa16.54■□□□□ 0.24
SCAMP4-209ENST00000585335 SMPD1P17405 629 aa16.54■□□□□ 0.24
SCAMP4-209ENST00000585335 ATP2B1P20020 1258 aa16.54■□□□□ 0.24
SCAMP4-209ENST00000585335 LY6KQ17RY6 165 aa16.54■□□□□ 0.24
SCAMP4-209ENST00000585335 TTC38Q5R3I4 469 aa16.54■□□□□ 0.24
SCAMP4-209ENST00000585335 CCDC62Q6P9F0 684 aa16.54■□□□□ 0.24
SCAMP4-209ENST00000585335 FERMT3Q86UX7 667 aa16.54■□□□□ 0.24
SCAMP4-209ENST00000585335 DHX37Q8IY37 1157 aaKnown RBP16.54■□□□□ 0.24
SCAMP4-209ENST00000585335 ARRDC4Q8NCT1 418 aa16.54■□□□□ 0.24
SCAMP4-209ENST00000585335 OR6J1Q8NGC5 347 aa16.54■□□□□ 0.24
SCAMP4-209ENST00000585335 ABHD8Q96I13 439 aa16.54■□□□□ 0.24
SCAMP4-209ENST00000585335 ZNF577Q9BSK1 485 aa16.54■□□□□ 0.24
SCAMP4-209ENST00000585335 MLXIPQ9HAP2 919 aa16.54■□□□□ 0.24
SCAMP4-209ENST00000585335 IGLV3-22A0A075B6J6 115 aa16.53■□□□□ 0.24
SCAMP4-209ENST00000585335 DYNC1LI2O43237 492 aaPredicted RBP16.53■□□□□ 0.24
SCAMP4-209ENST00000585335 ZEB2O60315 1214 aa16.53■□□□□ 0.24
SCAMP4-209ENST00000585335 ARIH2O95376 493 aa16.53■□□□□ 0.24
SCAMP4-209ENST00000585335 BAG4O95429 457 aaKnown RBP16.53■□□□□ 0.24
SCAMP4-209ENST00000585335 GGPS1O95749 300 aa16.53■□□□□ 0.24
SCAMP4-209ENST00000585335 ZSCAN22P10073 491 aaPredicted RBP16.53■□□□□ 0.24
SCAMP4-209ENST00000585335 UBA1P22314 1058 aaKnown RBP16.53■□□□□ 0.24
SCAMP4-209ENST00000585335 CPT1AP50416 773 aa16.53■□□□□ 0.24
SCAMP4-209ENST00000585335 LAMC2Q13753 1193 aa16.53■□□□□ 0.24
SCAMP4-209ENST00000585335 ANO1Q5XXA6 986 aa16.53■□□□□ 0.24
SCAMP4-209ENST00000585335 RNF180Q86T96 592 aa16.53■□□□□ 0.24
SCAMP4-209ENST00000585335 CYP2W1Q8TAV3 490 aa16.53■□□□□ 0.24
SCAMP4-209ENST00000585335 MBOAT7Q96N66 472 aa16.53■□□□□ 0.24
SCAMP4-209ENST00000585335 AGO4Q9HCK5 861 aaKnown RBP16.53■□□□□ 0.24
SCAMP4-209ENST00000585335 GNEQ9Y223 722 aaKnown RBP16.53■□□□□ 0.24
SCAMP4-209ENST00000585335 SYNRGQ9UMZ2 1314 aa16.52■□□□□ 0.24
SCAMP4-209ENST00000585335 IPO5O00410 1097 aaKnown RBP16.52■□□□□ 0.24
SCAMP4-209ENST00000585335 NOP56O00567 594 aaKnown RBP16.52■□□□□ 0.24
SCAMP4-209ENST00000585335 NEMFO60524 1076 aa16.52■□□□□ 0.24
SCAMP4-209ENST00000585335 SGPL1O95470 568 aa16.52■□□□□ 0.24
SCAMP4-209ENST00000585335 TFRCP02786 760 aaKnown RBP16.52■□□□□ 0.24
SCAMP4-209ENST00000585335 C6orf222P0C671 652 aaPredicted RBP16.52■□□□□ 0.24
SCAMP4-209ENST00000585335 ARP10275 920 aa16.52■□□□□ 0.24
SCAMP4-209ENST00000585335 SEMA3FQ13275 785 aa16.52■□□□□ 0.24
SCAMP4-209ENST00000585335 CELF3Q5SZQ8 465 aaKnown RBP16.52■□□□□ 0.24
SCAMP4-209ENST00000585335 LHX8Q68G74 356 aa16.52■□□□□ 0.24
SCAMP4-209ENST00000585335 U2AF1L4Q8WU68 220 aaKnown RBP16.52■□□□□ 0.24
SCAMP4-209ENST00000585335 UPF3AQ9H1J1 476 aaKnown RBP16.52■□□□□ 0.24
SCAMP4-209ENST00000585335 TBC1D22BQ9NU19 505 aa16.52■□□□□ 0.24
SCAMP4-209ENST00000585335 PKD2L1Q9P0L9 805 aa16.52■□□□□ 0.24
SCAMP4-209ENST00000585335 HTTP42858 3142 aa16.52■□□□□ 0.24
SCAMP4-209ENST00000585335 NFASCO94856 1347 aa16.51■□□□□ 0.23
SCAMP4-209ENST00000585335 KBTBD13C9JR72 458 aa16.51■□□□□ 0.23
SCAMP4-209ENST00000585335 TBX3O15119 743 aa16.51■□□□□ 0.23
SCAMP4-209ENST00000585335 MYCNP04198 464 aaPredicted RBP16.51■□□□□ 0.23
SCAMP4-209ENST00000585335 MCM7P33993 719 aa16.51■□□□□ 0.23
SCAMP4-209ENST00000585335 GJA8P48165 433 aa16.51■□□□□ 0.23
SCAMP4-209ENST00000585335 GJA9P57773 515 aa16.51■□□□□ 0.23
SCAMP4-209ENST00000585335 RESTQ13127 1097 aa16.51■□□□□ 0.23
SCAMP4-209ENST00000585335 CALCRLQ16602 461 aa16.51■□□□□ 0.23
SCAMP4-209ENST00000585335 MYSM1Q5VVJ2 828 aa16.51■□□□□ 0.23
SCAMP4-209ENST00000585335 METTL7BQ6UX53 244 aa16.51■□□□□ 0.23
SCAMP4-209ENST00000585335 CYFIP1Q7L576 1253 aa16.51■□□□□ 0.23
SCAMP4-209ENST00000585335 SLFN12Q8IYM2 578 aa16.51■□□□□ 0.23
SCAMP4-209ENST00000585335 EMID1Q96A84 441 aaPredicted RBP16.51■□□□□ 0.23
SCAMP4-209ENST00000585335 LENG9Q96B70 501 aa16.51■□□□□ 0.23
SCAMP4-209ENST00000585335 LENG1Q96BZ8 264 aaPredicted RBP16.51■□□□□ 0.23
SCAMP4-209ENST00000585335 FAM20AQ96MK3 541 aa16.51■□□□□ 0.23
SCAMP4-209ENST00000585335 SPATA33Q96N06 139 aa16.51■□□□□ 0.23
SCAMP4-209ENST00000585335 JPH1Q9HDC5 661 aaPredicted RBP16.51■□□□□ 0.23
SCAMP4-209ENST00000585335 OGDHLQ9ULD0 1010 aa16.51■□□□□ 0.23
SCAMP4-209ENST00000585335 CEP131Q9UPN4 1083 aa16.51■□□□□ 0.23
SCAMP4-209ENST00000585335 ADCY6O43306 1168 aa16.5■□□□□ 0.23
SCAMP4-209ENST00000585335 SLC37A4O43826 429 aa16.5■□□□□ 0.23
SCAMP4-209ENST00000585335 GAS7O60861 476 aa16.5■□□□□ 0.23
SCAMP4-209ENST00000585335 BMP15O95972 392 aa16.5■□□□□ 0.23
SCAMP4-209ENST00000585335 PGK1P00558 417 aa16.5■□□□□ 0.23
SCAMP4-209ENST00000585335 KCNA2P16389 499 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms