RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-222ENST00000583732 PPTC7Q8NI37 304 aa17.58■□□□□ 0.4
SREBF1-222ENST00000583732 PIBF1Q8WXW3 757 aa17.58■□□□□ 0.4
SREBF1-222ENST00000583732 WNT8BQ93098 351 aa17.58■□□□□ 0.4
SREBF1-222ENST00000583732 EMID1Q96A84 441 aaPredicted RBP17.58■□□□□ 0.4
SREBF1-222ENST00000583732 MTMR8Q96EF0 704 aa17.58■□□□□ 0.4
SREBF1-222ENST00000583732 UHRF1Q96T88 793 aaPredicted RBP17.58■□□□□ 0.4
SREBF1-222ENST00000583732 MTCH2Q9Y6C9 303 aa17.58■□□□□ 0.4
SREBF1-222ENST00000583732 BAZ2BQ9UIF8 2168 aaKnown RBP17.57■□□□□ 0.4
SREBF1-222ENST00000583732 LCHNA4D1U4 455 aa17.57■□□□□ 0.4
SREBF1-222ENST00000583732 NBNO60934 754 aa17.57■□□□□ 0.4
SREBF1-222ENST00000583732 F2P00734 622 aa17.57■□□□□ 0.4
SREBF1-222ENST00000583732 CYP21A2P08686 494 aa17.57■□□□□ 0.4
SREBF1-222ENST00000583732 CNKSR3Q6P9H4 555 aa17.57■□□□□ 0.4
SREBF1-222ENST00000583732 RALYLQ86SE5 291 aaKnown RBP17.57■□□□□ 0.4
SREBF1-222ENST00000583732 GPKOWQ92917 476 aaPredicted RBP eCLIP17.57■□□□□ 0.47e-6■□□□□ 8.1
SREBF1-222ENST00000583732 SPATA33Q96N06 139 aa17.57■□□□□ 0.4
SREBF1-222ENST00000583732 NECAB3Q96P71 396 aaPredicted RBP17.57■□□□□ 0.4
SREBF1-222ENST00000583732 ZBED2Q9BTP6 218 aa17.57■□□□□ 0.4
SREBF1-222ENST00000583732 TAF6LQ9Y6J9 622 aa17.57■□□□□ 0.4
SREBF1-222ENST00000583732 ERICH2A1L162 156 aa17.56■□□□□ 0.4
SREBF1-222ENST00000583732 GCOM1H8Y6P7 765 aaPredicted RBP17.56■□□□□ 0.4
SREBF1-222ENST00000583732 HAS3O00219 553 aa17.56■□□□□ 0.4
SREBF1-222ENST00000583732 POLR2MP0CAP2 368 aa17.56■□□□□ 0.4
SREBF1-222ENST00000583732 UBA1P22314 1058 aaKnown RBP17.56■□□□□ 0.4
SREBF1-222ENST00000583732 CCND2P30279 289 aa17.56■□□□□ 0.4
SREBF1-222ENST00000583732 GHRHRQ02643 423 aa17.56■□□□□ 0.4
SREBF1-222ENST00000583732 WTAPQ15007 396 aa17.56■□□□□ 0.4
SREBF1-222ENST00000583732 HSDL1Q3SXM5 330 aa17.56■□□□□ 0.4
SREBF1-222ENST00000583732 STOX1Q6ZVD7 989 aa17.56■□□□□ 0.4
SREBF1-222ENST00000583732 KCNQ1P51787 676 aa17.55■□□□□ 0.4
SREBF1-222ENST00000583732 SP2Q02086 613 aa17.55■□□□□ 0.4
SREBF1-222ENST00000583732 RBL2Q08999 1139 aa17.55■□□□□ 0.4
SREBF1-222ENST00000583732 PTK7Q13308 1070 aa17.55■□□□□ 0.4
SREBF1-222ENST00000583732 GRB10Q13322 594 aa17.55■□□□□ 0.4
SREBF1-222ENST00000583732 HIC1Q14526 733 aa17.55■□□□□ 0.4
SREBF1-222ENST00000583732 CELF3Q5SZQ8 465 aaKnown RBP17.55■□□□□ 0.4
SREBF1-222ENST00000583732 ZNF618Q5T7W0 954 aa17.55■□□□□ 0.4
SREBF1-222ENST00000583732 MYSM1Q5VVJ2 828 aa17.55■□□□□ 0.4
SREBF1-222ENST00000583732 FAM117BQ6P1L5 589 aa17.55■□□□□ 0.4
SREBF1-222ENST00000583732 VSIG10LQ86VR7 867 aa17.55■□□□□ 0.4
SREBF1-222ENST00000583732 GDPD5Q8WTR4 605 aa17.55■□□□□ 0.4
SREBF1-222ENST00000583732 RUFY2Q8WXA3 655 aa17.55■□□□□ 0.4
SREBF1-222ENST00000583732 MTUS1Q9ULD2 1270 aa17.55■□□□□ 0.4
SREBF1-222ENST00000583732 U3KPZ7 1027 aaPredicted RBP17.55■□□□□ 0.4
SREBF1-222ENST00000583732 PRRC2BQ5JSZ5 2229 aaKnown RBP17.54■□□□□ 0.4
SREBF1-222ENST00000583732 E7EWF7 191 aa17.54■□□□□ 0.4
SREBF1-222ENST00000583732 CYTH3O43739 400 aa17.54■□□□□ 0.4
SREBF1-222ENST00000583732 CXCL10P02778 98 aa17.54■□□□□ 0.4
SREBF1-222ENST00000583732 CHMLP26374 656 aa17.54■□□□□ 0.4
SREBF1-222ENST00000583732 IRX6P78412 446 aaPredicted RBP17.54■□□□□ 0.4
SREBF1-222ENST00000583732 TRIM71Q2Q1W2 868 aaKnown RBP17.54■□□□□ 0.4
SREBF1-222ENST00000583732 KCNV1Q6PIU1 500 aa17.54■□□□□ 0.4
SREBF1-222ENST00000583732 RIOX1Q9H6W3 641 aa17.54■□□□□ 0.4
SREBF1-222ENST00000583732 MLXIPQ9HAP2 919 aa17.54■□□□□ 0.4
SREBF1-222ENST00000583732 MAP3K20Q9NYL2 800 aaKnown RBP17.54■□□□□ 0.4
SREBF1-222ENST00000583732 SIP14410 1827 aa17.54■□□□□ 0.4
SREBF1-222ENST00000583732 PARNO95453 639 aaKnown RBP17.53■□□□□ 0.4
SREBF1-222ENST00000583732 TRAF7Q6Q0C0 670 aa17.53■□□□□ 0.4
SREBF1-222ENST00000583732 NCOA7Q8NI08 942 aa17.53■□□□□ 0.4
SREBF1-222ENST00000583732 BCAS3Q9H6U6 928 aa17.53■□□□□ 0.4
SREBF1-222ENST00000583732 SUPT16HQ9Y5B9 1047 aaKnown RBP17.53■□□□□ 0.4
SREBF1-222ENST00000583732 MICAL3Q7RTP6 2002 aa17.53■□□□□ 0.4
SREBF1-222ENST00000583732 TRANK1O15050 2925 aa17.53■□□□□ 0.4
SREBF1-222ENST00000583732 PNMA6FA0A0J9YX94 578 aa17.52■□□□□ 0.4
SREBF1-222ENST00000583732 PPFIA4O75335 1185 aa17.52■□□□□ 0.4
SREBF1-222ENST00000583732 HOXD8P13378 290 aaPredicted RBP17.52■□□□□ 0.4
SREBF1-222ENST00000583732 POU3F3P20264 500 aaPredicted RBP17.52■□□□□ 0.4
SREBF1-222ENST00000583732 THPOP40225 353 aa17.52■□□□□ 0.4
SREBF1-222ENST00000583732 TROAPQ12815 778 aa17.52■□□□□ 0.4
SREBF1-222ENST00000583732 TRAF1Q13077 416 aa17.52■□□□□ 0.4
SREBF1-222ENST00000583732 MBTPS1Q14703 1052 aa17.52■□□□□ 0.4
SREBF1-222ENST00000583732 SART3Q15020 963 aaKnown RBP17.52■□□□□ 0.4
SREBF1-222ENST00000583732 CATIPQ7Z7H3 387 aa17.52■□□□□ 0.4
SREBF1-222ENST00000583732 C16orf70Q9BSU1 422 aa17.52■□□□□ 0.4
SREBF1-222ENST00000583732 RTEL1Q9NZ71 1219 aa17.52■□□□□ 0.4
SREBF1-222ENST00000583732 MUC3AQ02505 3323 aa17.52■□□□□ 0.39
SREBF1-222ENST00000583732 TTC28Q96AY4 2481 aa17.52■□□□□ 0.39
SREBF1-222ENST00000583732 ABHD14A-ACY1A0A1B0GW23 586 aa17.51■□□□□ 0.39
SREBF1-222ENST00000583732 C17orf102A2RUQ5 167 aa17.51■□□□□ 0.39
SREBF1-222ENST00000583732 NOP56O00567 594 aaKnown RBP17.51■□□□□ 0.39
SREBF1-222ENST00000583732 LGR5O75473 907 aa17.51■□□□□ 0.39
SREBF1-222ENST00000583732 GJB5O95377 273 aa17.51■□□□□ 0.39
SREBF1-222ENST00000583732 LGALS2P05162 132 aa17.51■□□□□ 0.39
SREBF1-222ENST00000583732 BMP1P13497 986 aa17.51■□□□□ 0.39
SREBF1-222ENST00000583732 ANTXR2P58335 489 aa17.51■□□□□ 0.39
SREBF1-222ENST00000583732 IKBKEQ14164 716 aa17.51■□□□□ 0.39
SREBF1-222ENST00000583732 AAK1Q2M2I8 961 aa17.51■□□□□ 0.39
SREBF1-222ENST00000583732 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.51■□□□□ 0.398e-11■■■■■ 32.9
SREBF1-222ENST00000583732 SAMD3Q8N6K7 520 aa17.51■□□□□ 0.39
SREBF1-222ENST00000583732 MYL10Q9BUA6 226 aa17.51■□□□□ 0.39
SREBF1-222ENST00000583732 RAPGEFL1Q9UHV5 662 aa17.51■□□□□ 0.39
SREBF1-222ENST00000583732 XIRP2A4UGR9 3374 aa17.51■□□□□ 0.39
SREBF1-222ENST00000583732 H3BRB1 525 aa17.5■□□□□ 0.39
SREBF1-222ENST00000583732 SGSM2O43147 1006 aa17.5■□□□□ 0.39
SREBF1-222ENST00000583732 LPXNO60711 386 aa17.5■□□□□ 0.39
SREBF1-222ENST00000583732 CTSHP09668 335 aa17.5■□□□□ 0.39
SREBF1-222ENST00000583732 SMIM10L2AP0DMW4 78 aa17.5■□□□□ 0.39
SREBF1-222ENST00000583732 SMIM10L2BP0DMW5 78 aa17.5■□□□□ 0.39
SREBF1-222ENST00000583732 COL9A1P20849 921 aa17.5■□□□□ 0.39
SREBF1-222ENST00000583732 MRPS9P82933 396 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms