RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 IGLV3-22A0A075B6J6 115 aa10.56□□□□□ -0.72
UBBP4-201ENST00000583708 PPFIA4O75335 1185 aa10.56□□□□□ -0.72
UBBP4-201ENST00000583708 BRD1O95696 1058 aa10.56□□□□□ -0.72
UBBP4-201ENST00000583708 TXNP10599 105 aaKnown RBP10.56□□□□□ -0.72
UBBP4-201ENST00000583708 ITGB5P18084 799 aa10.56□□□□□ -0.72
UBBP4-201ENST00000583708 GJA9P57773 515 aa10.56□□□□□ -0.72
UBBP4-201ENST00000583708 INF2Q27J81 1249 aa10.56□□□□□ -0.72
UBBP4-201ENST00000583708 LETM2Q2VYF4 491 aa10.56□□□□□ -0.72
UBBP4-201ENST00000583708 METTL7BQ6UX53 244 aa10.56□□□□□ -0.72
UBBP4-201ENST00000583708 SEPT14Q6ZU15 432 aa10.56□□□□□ -0.72
UBBP4-201ENST00000583708 KCTD17Q8N5Z5 321 aa10.56□□□□□ -0.72
UBBP4-201ENST00000583708 IL31RAQ8NI17 732 aa10.56□□□□□ -0.72
UBBP4-201ENST00000583708 TNPO1Q92973 898 aaKnown RBP10.56□□□□□ -0.72
UBBP4-201ENST00000583708 ZNF396Q96N95 335 aaPredicted RBP10.56□□□□□ -0.72
UBBP4-201ENST00000583708 SDF4Q9BRK5 362 aa10.56□□□□□ -0.72
UBBP4-201ENST00000583708 TSEN34Q9BSV6 310 aaKnown RBP10.56□□□□□ -0.72
UBBP4-201ENST00000583708 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.56□□□□□ -0.72
UBBP4-201ENST00000583708 UPF3AQ9H1J1 476 aaKnown RBP10.56□□□□□ -0.72
UBBP4-201ENST00000583708 DDX25Q9UHL0 483 aaKnown RBP10.56□□□□□ -0.72
UBBP4-201ENST00000583708 CFAP45Q9UL16 551 aa10.56□□□□□ -0.72
UBBP4-201ENST00000583708 GNEQ9Y223 722 aaKnown RBP10.56□□□□□ -0.72
UBBP4-201ENST00000583708 RBBP6Q7Z6E9 1792 aaKnown RBP10.56□□□□□ -0.72
UBBP4-201ENST00000583708 FAM86B1E9PN63 330 aa10.55□□□□□ -0.72
UBBP4-201ENST00000583708 IPO5O00410 1097 aaKnown RBP10.55□□□□□ -0.72
UBBP4-201ENST00000583708 SLC26A4O43511 780 aa10.55□□□□□ -0.72
UBBP4-201ENST00000583708 CCNT1O60563 726 aaKnown RBP10.55□□□□□ -0.72
UBBP4-201ENST00000583708 CABYRO75952 493 aa10.55□□□□□ -0.72
UBBP4-201ENST00000583708 RGS20O76081 388 aa10.55□□□□□ -0.72
UBBP4-201ENST00000583708 ECM2O94769 699 aaPredicted RBP10.55□□□□□ -0.72
UBBP4-201ENST00000583708 FAM86B2P0C5J1 330 aa10.55□□□□□ -0.72
UBBP4-201ENST00000583708 CCL5P13501 91 aa10.55□□□□□ -0.72
UBBP4-201ENST00000583708 CST5P28325 142 aaPredicted RBP10.55□□□□□ -0.72
UBBP4-201ENST00000583708 CNGA1P29973 690 aa10.55□□□□□ -0.72
UBBP4-201ENST00000583708 PRPHP41219 470 aa10.55□□□□□ -0.72
UBBP4-201ENST00000583708 CPT1AP50416 773 aa10.55□□□□□ -0.72
UBBP4-201ENST00000583708 KRT76Q01546 638 aa10.55□□□□□ -0.72
UBBP4-201ENST00000583708 PRR16Q569H4 304 aa10.55□□□□□ -0.72
UBBP4-201ENST00000583708 TTC38Q5R3I4 469 aa10.55□□□□□ -0.72
UBBP4-201ENST00000583708 CELF3Q5SZQ8 465 aaKnown RBP10.55□□□□□ -0.72
UBBP4-201ENST00000583708 MYSM1Q5VVJ2 828 aa10.55□□□□□ -0.72
UBBP4-201ENST00000583708 ARL6IP4Q66PJ3 421 aaKnown RBP10.55□□□□□ -0.72
UBBP4-201ENST00000583708 RNF180Q86T96 592 aa10.55□□□□□ -0.72
UBBP4-201ENST00000583708 DHX37Q8IY37 1157 aaKnown RBP10.55□□□□□ -0.72
UBBP4-201ENST00000583708 PCSK9Q8NBP7 692 aaKnown RBP10.55□□□□□ -0.72
UBBP4-201ENST00000583708 SH3TC2Q8TF17 1288 aa10.55□□□□□ -0.72
UBBP4-201ENST00000583708 SLC5A5Q92911 643 aa10.55□□□□□ -0.72
UBBP4-201ENST00000583708 ZNF577Q9BSK1 485 aa10.55□□□□□ -0.72
UBBP4-201ENST00000583708 RAB34Q9BZG1 259 aa10.55□□□□□ -0.72
UBBP4-201ENST00000583708 CRISPLD2Q9H0B8 497 aa10.55□□□□□ -0.72
UBBP4-201ENST00000583708 RNF208Q9H0X6 261 aa10.55□□□□□ -0.72
UBBP4-201ENST00000583708 MLXIPQ9HAP2 919 aa10.55□□□□□ -0.72
UBBP4-201ENST00000583708 AGO4Q9HCK5 861 aaKnown RBP10.55□□□□□ -0.72
UBBP4-201ENST00000583708 KCNMB3Q9NPA1 279 aa10.55□□□□□ -0.72
UBBP4-201ENST00000583708 RTEL1Q9NZ71 1219 aa10.55□□□□□ -0.72
UBBP4-201ENST00000583708 PLXNA1Q9UIW2 1896 aa10.55□□□□□ -0.72
UBBP4-201ENST00000583708 A6NJR5 290 aa10.54□□□□□ -0.72
UBBP4-201ENST00000583708 EDIL3O43854 480 aa10.54□□□□□ -0.72
UBBP4-201ENST00000583708 MARCH6O60337 910 aa10.54□□□□□ -0.72
UBBP4-201ENST00000583708 NEMFO60524 1076 aa10.54□□□□□ -0.72
UBBP4-201ENST00000583708 DKC1O60832 514 aaKnown RBP eCLIP10.54□□□□□ -0.72
UBBP4-201ENST00000583708 SGPL1O95470 568 aa10.54□□□□□ -0.72
UBBP4-201ENST00000583708 F13A1P00488 732 aa10.54□□□□□ -0.72
UBBP4-201ENST00000583708 KCNA2P16389 499 aa10.54□□□□□ -0.72
UBBP4-201ENST00000583708 SFNP31947 248 aa10.54□□□□□ -0.72
UBBP4-201ENST00000583708 DDIT3P35638 169 aa10.54□□□□□ -0.72
UBBP4-201ENST00000583708 GJA8P48165 433 aa10.54□□□□□ -0.72
UBBP4-201ENST00000583708 RESTQ13127 1097 aa10.54□□□□□ -0.72
UBBP4-201ENST00000583708 PDIA5Q14554 519 aa10.54□□□□□ -0.72
UBBP4-201ENST00000583708 PRAMEF19Q5SWL8 479 aa10.54□□□□□ -0.72
UBBP4-201ENST00000583708 LHX8Q68G74 356 aa10.54□□□□□ -0.72
UBBP4-201ENST00000583708 ZNF746Q6NUN9 644 aaPredicted RBP10.54□□□□□ -0.72
UBBP4-201ENST00000583708 FBXO16Q8IX29 292 aaPredicted RBP10.54□□□□□ -0.72
UBBP4-201ENST00000583708 SMAP1Q8IYB5 467 aaPredicted RBP10.54□□□□□ -0.72
UBBP4-201ENST00000583708 TRPV1Q8NER1 839 aa10.54□□□□□ -0.72
UBBP4-201ENST00000583708 PPTC7Q8NI37 304 aa10.54□□□□□ -0.72
UBBP4-201ENST00000583708 LENG9Q96B70 501 aa10.54□□□□□ -0.72
UBBP4-201ENST00000583708 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.54□□□□□ -0.72
UBBP4-201ENST00000583708 FOXD4L1Q9NU39 408 aa10.54□□□□□ -0.72
UBBP4-201ENST00000583708 POLR3EQ9NVU0 708 aa10.54□□□□□ -0.72
UBBP4-201ENST00000583708 CHMP5Q9NZZ3 219 aa10.54□□□□□ -0.72
UBBP4-201ENST00000583708 OGDHLQ9ULD0 1010 aa10.54□□□□□ -0.72
UBBP4-201ENST00000583708 MOXD2PA6NHM9 499 aa10.53□□□□□ -0.72
UBBP4-201ENST00000583708 KIF28PB7ZC32 967 aa10.53□□□□□ -0.72
UBBP4-201ENST00000583708 ADAMTS3O15072 1205 aa10.53□□□□□ -0.72
UBBP4-201ENST00000583708 MSH4O15457 936 aa10.53□□□□□ -0.72
UBBP4-201ENST00000583708 HOXD8P13378 290 aaPredicted RBP10.53□□□□□ -0.72
UBBP4-201ENST00000583708 SMPD1P17405 629 aa10.53□□□□□ -0.72
UBBP4-201ENST00000583708 MUTP22033 750 aa10.53□□□□□ -0.72
UBBP4-201ENST00000583708 CCND3P30281 292 aaPredicted RBP10.53□□□□□ -0.72
UBBP4-201ENST00000583708 ADCYAP1R1P41586 468 aa10.53□□□□□ -0.72
UBBP4-201ENST00000583708 SLC26A2P50443 739 aa10.53□□□□□ -0.72
UBBP4-201ENST00000583708 TOB1P50616 345 aaPredicted RBP10.53□□□□□ -0.72
UBBP4-201ENST00000583708 FOSBP53539 338 aa10.53□□□□□ -0.72
UBBP4-201ENST00000583708 CALCRLQ16602 461 aa10.53□□□□□ -0.72
UBBP4-201ENST00000583708 DGKDQ16760 1214 aa10.53□□□□□ -0.72
UBBP4-201ENST00000583708 EARS2Q5JPH6 523 aaKnown RBP10.53□□□□□ -0.72
UBBP4-201ENST00000583708 EEPD1Q7L9B9 569 aa10.53□□□□□ -0.72
UBBP4-201ENST00000583708 KLHDC9Q8NEP7 349 aa10.53□□□□□ -0.72
UBBP4-201ENST00000583708 ETNPPLQ8TBG4 499 aa10.53□□□□□ -0.72
UBBP4-201ENST00000583708 SEPT1Q8WYJ6 367 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms