RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 EMID1Q96A84 441 aaPredicted RBP13.08□□□□□ -0.32
CASC3-208ENST00000583649 IWS1Q96ST2 819 aa13.08□□□□□ -0.32
CASC3-208ENST00000583649 PHF7Q9BWX1 381 aaPredicted RBP13.08□□□□□ -0.32
CASC3-208ENST00000583649 TLR9Q9NR96 1032 aa13.08□□□□□ -0.32
CASC3-208ENST00000583649 TRIP12Q14669 1992 aaPredicted RBP13.08□□□□□ -0.32
CASC3-208ENST00000583649 USP34Q70CQ2 3546 aa13.08□□□□□ -0.32
CASC3-208ENST00000583649 PPFIA4O75335 1185 aa13.07□□□□□ -0.32
CASC3-208ENST00000583649 MMP1P03956 469 aa13.07□□□□□ -0.32
CASC3-208ENST00000583649 SRGAP2BP0DMP2 458 aa13.07□□□□□ -0.32
CASC3-208ENST00000583649 DLX2Q07687 328 aaPredicted RBP13.07□□□□□ -0.32
CASC3-208ENST00000583649 ARHGAP1Q07960 439 aa13.07□□□□□ -0.32
CASC3-208ENST00000583649 COASYQ13057 564 aa13.07□□□□□ -0.32
CASC3-208ENST00000583649 ADAM15Q13444 863 aa13.07□□□□□ -0.32
CASC3-208ENST00000583649 LY6KQ17RY6 165 aa13.07□□□□□ -0.32
CASC3-208ENST00000583649 TCTN1Q2MV58 587 aa13.07□□□□□ -0.32
CASC3-208ENST00000583649 NAALADL2Q58DX5 795 aa13.07□□□□□ -0.32
CASC3-208ENST00000583649 KCNV1Q6PIU1 500 aa13.07□□□□□ -0.32
CASC3-208ENST00000583649 BTNL9Q6UXG8 535 aa13.07□□□□□ -0.32
CASC3-208ENST00000583649 NKD2Q969F2 451 aaPredicted RBP13.07□□□□□ -0.32
CASC3-208ENST00000583649 CHMP4BQ9H444 224 aaKnown RBP13.07□□□□□ -0.32
CASC3-208ENST00000583649 MRVI1Q9Y6F6 885 aa13.07□□□□□ -0.32
CASC3-208ENST00000583649 COL4A6Q14031 1691 aa13.07□□□□□ -0.32
CASC3-208ENST00000583649 WDR19Q8NEZ3 1342 aa13.07□□□□□ -0.32
CASC3-208ENST00000583649 C17orf102A2RUQ5 167 aa13.06□□□□□ -0.32
CASC3-208ENST00000583649 RNF113AO15541 343 aaKnown RBP13.06□□□□□ -0.32
CASC3-208ENST00000583649 GALR2O43603 387 aaPredicted RBP13.06□□□□□ -0.32
CASC3-208ENST00000583649 TBX10O75333 385 aa13.06□□□□□ -0.32
CASC3-208ENST00000583649 ARIH2O95376 493 aa13.06□□□□□ -0.32
CASC3-208ENST00000583649 MS4A1P11836 297 aa13.06□□□□□ -0.32
CASC3-208ENST00000583649 ICAM3P32942 547 aa13.06□□□□□ -0.32
CASC3-208ENST00000583649 SLC16A2P36021 539 aa13.06□□□□□ -0.32
CASC3-208ENST00000583649 PPARAQ07869 468 aa13.06□□□□□ -0.32
CASC3-208ENST00000583649 MBTPS1Q14703 1052 aa13.06□□□□□ -0.32
CASC3-208ENST00000583649 CBX2Q14781 532 aaPredicted RBP13.06□□□□□ -0.32
CASC3-208ENST00000583649 TRIM71Q2Q1W2 868 aaKnown RBP13.06□□□□□ -0.32
CASC3-208ENST00000583649 SERINC5Q86VE9 423 aa13.06□□□□□ -0.32
CASC3-208ENST00000583649 MCF2L2Q86YR7 1114 aa13.06□□□□□ -0.32
CASC3-208ENST00000583649 KBTBD3Q8NAB2 608 aa13.06□□□□□ -0.32
CASC3-208ENST00000583649 SMRP1Q8NCR6 262 aa13.06□□□□□ -0.32
CASC3-208ENST00000583649 CLEC4DQ8WXI8 215 aa13.06□□□□□ -0.32
CASC3-208ENST00000583649 ATP6V0A1Q93050 837 aa13.06□□□□□ -0.32
CASC3-208ENST00000583649 RPGRIP1Q96KN7 1286 aa13.06□□□□□ -0.32
CASC3-208ENST00000583649 CACNA1AO00555 2505 aa13.05□□□□□ -0.32
CASC3-208ENST00000583649 ZDBF2Q9HCK1 2354 aa13.05□□□□□ -0.32
CASC3-208ENST00000583649 PRR23AA6NEV1 266 aa13.05□□□□□ -0.32
CASC3-208ENST00000583649 GRM6O15303 877 aa13.05□□□□□ -0.32
CASC3-208ENST00000583649 RANBP6O60518 1105 aaKnown RBP13.05□□□□□ -0.32
CASC3-208ENST00000583649 EIF3JO75822 258 aaKnown RBP13.05□□□□□ -0.32
CASC3-208ENST00000583649 CHGBP05060 677 aa13.05□□□□□ -0.32
CASC3-208ENST00000583649 NBL1P41271 181 aa13.05□□□□□ -0.32
CASC3-208ENST00000583649 VCPP55072 806 aaKnown RBP13.05□□□□□ -0.32
CASC3-208ENST00000583649 BTG3Q14201 252 aaPredicted RBP13.05□□□□□ -0.32
CASC3-208ENST00000583649 ARHGEF16Q5VV41 709 aa13.05□□□□□ -0.32
CASC3-208ENST00000583649 TRAF7Q6Q0C0 670 aa13.05□□□□□ -0.32
CASC3-208ENST00000583649 EFHBQ8N7U6 833 aa13.05□□□□□ -0.32
CASC3-208ENST00000583649 P2RX5Q93086 422 aa13.05□□□□□ -0.32
CASC3-208ENST00000583649 OSBP2Q969R2 916 aa13.05□□□□□ -0.32
CASC3-208ENST00000583649 MSLNLQ96KJ4 702 aa13.05□□□□□ -0.32
CASC3-208ENST00000583649 INCENPQ9NQS7 918 aa13.05□□□□□ -0.32
CASC3-208ENST00000583649 ADGRA3Q8IWK6 1321 aa13.05□□□□□ -0.32
CASC3-208ENST00000583649 TECTAO75443 2155 aa13.04□□□□□ -0.32
CASC3-208ENST00000583649 CFAP54Q96N23 3096 aa13.04□□□□□ -0.32
CASC3-208ENST00000583649 HAS3O00219 553 aa13.04□□□□□ -0.32
CASC3-208ENST00000583649 ZNF286BP0CG31 522 aa13.04□□□□□ -0.32
CASC3-208ENST00000583649 TOP1P11387 765 aaKnown RBP13.04□□□□□ -0.32
CASC3-208ENST00000583649 ATF7P17544 494 aaPredicted RBP13.04□□□□□ -0.32
CASC3-208ENST00000583649 RRP1P56182 461 aaKnown RBP13.04□□□□□ -0.32
CASC3-208ENST00000583649 PTPN21Q16825 1174 aa13.04□□□□□ -0.32
CASC3-208ENST00000583649 ASCL5Q7RTU5 278 aa13.04□□□□□ -0.32
CASC3-208ENST00000583649 CLP1Q92989 425 aaKnown RBP13.04□□□□□ -0.32
CASC3-208ENST00000583649 RIPOR3Q96MK2 946 aa13.04□□□□□ -0.32
CASC3-208ENST00000583649 RMDN3Q96TC7 470 aa13.04□□□□□ -0.32
CASC3-208ENST00000583649 EPB41L4AQ9HCS5 686 aaPredicted RBP13.04□□□□□ -0.32
CASC3-208ENST00000583649 GPCPD1Q9NPB8 672 aa13.04□□□□□ -0.32
CASC3-208ENST00000583649 ECHDC1Q9NTX5 307 aa13.04□□□□□ -0.32
CASC3-208ENST00000583649 DDX41Q9UJV9 622 aaKnown RBP13.04□□□□□ -0.32
CASC3-208ENST00000583649 MICAL3Q7RTP6 2002 aa13.03□□□□□ -0.32
CASC3-208ENST00000583649 TTBK2Q6IQ55 1244 aa13.03□□□□□ -0.32
CASC3-208ENST00000583649 UBALD2Q8IYN6 164 aa13.03□□□□□ -0.32
CASC3-208ENST00000583649 ASIC4Q96FT7 647 aa13.03□□□□□ -0.32
CASC3-208ENST00000583649 SPATA33Q96N06 139 aa13.03□□□□□ -0.32
CASC3-208ENST00000583649 LRRCC1Q9C099 1032 aa13.03□□□□□ -0.32
CASC3-208ENST00000583649 NR2E1Q9Y466 385 aa13.03□□□□□ -0.32
CASC3-208ENST00000583649 USP15Q9Y4E8 981 aaPredicted RBP13.03□□□□□ -0.32
CASC3-208ENST00000583649 FRMPD2Q68DX3 1309 aaPredicted RBP13.03□□□□□ -0.32
CASC3-208ENST00000583649 RALGAPA2Q2PPJ7 1873 aa13.03□□□□□ -0.32
CASC3-208ENST00000583649 MYH7P12883 1935 aa13.02□□□□□ -0.32
CASC3-208ENST00000583649 LINC01565O15544 149 aa13.02□□□□□ -0.33
CASC3-208ENST00000583649 CSPG5O95196 566 aa13.02□□□□□ -0.33
CASC3-208ENST00000583649 ZNF200P98182 395 aaPredicted RBP13.02□□□□□ -0.33
CASC3-208ENST00000583649 USH1GQ495M9 461 aa13.02□□□□□ -0.33
CASC3-208ENST00000583649 RSPH3Q86UC2 560 aa13.02□□□□□ -0.33
CASC3-208ENST00000583649 ADSSL1Q8N142 457 aa13.02□□□□□ -0.33
CASC3-208ENST00000583649 IL17RBQ9NRM6 502 aa13.02□□□□□ -0.33
CASC3-208ENST00000583649 TOMM22Q9NS69 142 aa13.02□□□□□ -0.33
CASC3-208ENST00000583649 PLAGL2Q9UPG8 496 aa13.02□□□□□ -0.33
CASC3-208ENST00000583649 ABCB11O95342 1321 aa13.02□□□□□ -0.33
CASC3-208ENST00000583649 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.01□□□□□ -0.33
CASC3-208ENST00000583649 H3BRB1 525 aa13.01□□□□□ -0.33
CASC3-208ENST00000583649 CTSHP09668 335 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms