RNA–Protein interactions for RNA: ENST00000583517.1

NLK-204, Transcript of nemo like kinase, humanhuman

TSL 3

Gene NLK, Length 695 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLK-204ENST00000583517 TRAF7Q6Q0C0 670 aa13.79□□□□□ -0.2
NLK-204ENST00000583517 DHX37Q8IY37 1157 aaKnown RBP13.79□□□□□ -0.2
NLK-204ENST00000583517 IL31RAQ8NI17 732 aa13.79□□□□□ -0.2
NLK-204ENST00000583517 YTHDC1Q96MU7 727 aaKnown RBP13.79□□□□□ -0.2
NLK-204ENST00000583517 UHRF1Q96T88 793 aaPredicted RBP13.79□□□□□ -0.2
NLK-204ENST00000583517 RIOX1Q9H6W3 641 aa13.79□□□□□ -0.2
NLK-204ENST00000583517 PRRC2BQ5JSZ5 2229 aaKnown RBP13.79□□□□□ -0.2
NLK-204ENST00000583517 PTPRSQ13332 1948 aa13.78□□□□□ -0.2
NLK-204ENST00000583517 GTPBP6O43824 516 aaPredicted RBP13.78□□□□□ -0.2
NLK-204ENST00000583517 TLL1O43897 1013 aa13.78□□□□□ -0.2
NLK-204ENST00000583517 CYP21A2P08686 494 aa13.78□□□□□ -0.2
NLK-204ENST00000583517 MYCLP12524 364 aaPredicted RBP13.78□□□□□ -0.2
NLK-204ENST00000583517 BMP1P13497 986 aa13.78□□□□□ -0.2
NLK-204ENST00000583517 HOXA13P31271 388 aaPredicted RBP13.78□□□□□ -0.2
NLK-204ENST00000583517 KCNJ6P48051 423 aa13.78□□□□□ -0.2
NLK-204ENST00000583517 SP2Q02086 613 aa13.78□□□□□ -0.2
NLK-204ENST00000583517 TFF2Q03403 129 aa13.78□□□□□ -0.2
NLK-204ENST00000583517 TRDNQ13061 729 aa13.78□□□□□ -0.2
NLK-204ENST00000583517 GRM4Q14833 912 aa13.78□□□□□ -0.2
NLK-204ENST00000583517 TCTN1Q2MV58 587 aa13.78□□□□□ -0.2
NLK-204ENST00000583517 HSDL1Q3SXM5 330 aa13.78□□□□□ -0.2
NLK-204ENST00000583517 CELF3Q5SZQ8 465 aaKnown RBP13.78□□□□□ -0.2
NLK-204ENST00000583517 CNKSR3Q6P9H4 555 aa13.78□□□□□ -0.2
NLK-204ENST00000583517 SPRED2Q7Z698 418 aa13.78□□□□□ -0.2
NLK-204ENST00000583517 ARNTL2Q8WYA1 636 aa13.78□□□□□ -0.2
NLK-204ENST00000583517 WNT8BQ93098 351 aa13.78□□□□□ -0.2
NLK-204ENST00000583517 ALG1Q9BT22 464 aa13.78□□□□□ -0.2
NLK-204ENST00000583517 TRIP12Q14669 1992 aaPredicted RBP13.78□□□□□ -0.2
NLK-204ENST00000583517 LCHNA4D1U4 455 aa13.77□□□□□ -0.21
NLK-204ENST00000583517 CYTH3O43739 400 aa13.77□□□□□ -0.21
NLK-204ENST00000583517 TGFB3P10600 412 aa13.77□□□□□ -0.21
NLK-204ENST00000583517 UBA1P22314 1058 aaKnown RBP13.77□□□□□ -0.21
NLK-204ENST00000583517 DEFB103AP81534 67 aa13.77□□□□□ -0.21
NLK-204ENST00000583517 PTH1RQ03431 593 aa13.77□□□□□ -0.21
NLK-204ENST00000583517 TROAPQ12815 778 aa13.77□□□□□ -0.21
NLK-204ENST00000583517 TRAF1Q13077 416 aa13.77□□□□□ -0.21
NLK-204ENST00000583517 HIC1Q14526 733 aa13.77□□□□□ -0.21
NLK-204ENST00000583517 MBTPS1Q14703 1052 aa13.77□□□□□ -0.21
NLK-204ENST00000583517 KRT40Q6A162 431 aa13.77□□□□□ -0.21
NLK-204ENST00000583517 TMCO2Q7Z6W1 182 aaPredicted RBP13.77□□□□□ -0.21
NLK-204ENST00000583517 HOMER1Q86YM7 354 aa13.77□□□□□ -0.21
NLK-204ENST00000583517 IL27Q8NEV9 243 aa13.77□□□□□ -0.21
NLK-204ENST00000583517 SPATA33Q96N06 139 aa13.77□□□□□ -0.21
NLK-204ENST00000583517 PIGSQ96S52 555 aa13.77□□□□□ -0.21
NLK-204ENST00000583517 SENP2Q9HC62 589 aa13.77□□□□□ -0.21
NLK-204ENST00000583517 U3KPZ7 1027 aaPredicted RBP13.77□□□□□ -0.21
NLK-204ENST00000583517 FRMPD4Q14CM0 1322 aa13.76□□□□□ -0.21
NLK-204ENST00000583517 ABHD14A-ACY1A0A1B0GW23 586 aa13.76□□□□□ -0.21
NLK-204ENST00000583517 GCOM1H8Y6P7 765 aaPredicted RBP13.76□□□□□ -0.21
NLK-204ENST00000583517 IFIT3O14879 490 aaKnown RBP13.76□□□□□ -0.21
NLK-204ENST00000583517 LPXNO60711 386 aa13.76□□□□□ -0.21
NLK-204ENST00000583517 GJB5O95377 273 aa13.76□□□□□ -0.21
NLK-204ENST00000583517 GGPS1O95749 300 aa13.76□□□□□ -0.21
NLK-204ENST00000583517 POLR2MP0CAP2 368 aa13.76□□□□□ -0.21
NLK-204ENST00000583517 CHMLP26374 656 aa13.76□□□□□ -0.21
NLK-204ENST00000583517 CCND2P30279 289 aa13.76□□□□□ -0.21
NLK-204ENST00000583517 HOXC8P31273 242 aa13.76□□□□□ -0.21
NLK-204ENST00000583517 ZNF200P98182 395 aaPredicted RBP13.76□□□□□ -0.21
NLK-204ENST00000583517 GRB10Q13322 594 aa13.76□□□□□ -0.21
NLK-204ENST00000583517 AAK1Q2M2I8 961 aa13.76□□□□□ -0.21
NLK-204ENST00000583517 ZNF618Q5T7W0 954 aa13.76□□□□□ -0.21
NLK-204ENST00000583517 GPKOWQ92917 476 aaPredicted RBP eCLIP13.76□□□□□ -0.21
NLK-204ENST00000583517 C16orf70Q9BSU1 422 aa13.76□□□□□ -0.21
NLK-204ENST00000583517 TAF6LQ9Y6J9 622 aa13.76□□□□□ -0.21
NLK-204ENST00000583517 PNMA6FA0A0J9YX94 578 aa13.75□□□□□ -0.21
NLK-204ENST00000583517 E7EWF7 191 aa13.75□□□□□ -0.21
NLK-204ENST00000583517 SORBS3O60504 671 aa13.75□□□□□ -0.21
NLK-204ENST00000583517 EFCAB14O75071 495 aa13.75□□□□□ -0.21
NLK-204ENST00000583517 KCNQ1P51787 676 aa13.75□□□□□ -0.21
NLK-204ENST00000583517 MKRN4PQ13434 485 aaPredicted RBP13.75□□□□□ -0.21
NLK-204ENST00000583517 SKIV2LQ15477 1246 aaKnown RBP13.75□□□□□ -0.21
NLK-204ENST00000583517 SERINC5Q86VE9 423 aa13.75□□□□□ -0.21
NLK-204ENST00000583517 RUFY2Q8WXA3 655 aa13.75□□□□□ -0.21
NLK-204ENST00000583517 RAD9AQ99638 391 aa13.75□□□□□ -0.21
NLK-204ENST00000583517 COG5Q9UP83 839 aa13.75□□□□□ -0.21
NLK-204ENST00000583517 COL4A4P53420 1690 aaPredicted RBP13.75□□□□□ -0.21
NLK-204ENST00000583517 EMSYQ7Z589 1322 aa13.74□□□□□ -0.21
NLK-204ENST00000583517 ERICH2A1L162 156 aa13.74□□□□□ -0.21
NLK-204ENST00000583517 RBAK-RBAKDNI3L0D1 243 aa13.74□□□□□ -0.21
NLK-204ENST00000583517 MRPS9P82933 396 aaKnown RBP13.74□□□□□ -0.21
NLK-204ENST00000583517 IKBKEQ14164 716 aa13.74□□□□□ -0.21
NLK-204ENST00000583517 WTAPQ15007 396 aa13.74□□□□□ -0.21
NLK-204ENST00000583517 RALYLQ86SE5 291 aaKnown RBP13.74□□□□□ -0.21
NLK-204ENST00000583517 FCHSD1Q86WN1 690 aa13.74□□□□□ -0.21
NLK-204ENST00000583517 NCOA7Q8NI08 942 aa13.74□□□□□ -0.21
NLK-204ENST00000583517 NECAB3Q96P71 396 aaPredicted RBP13.74□□□□□ -0.21
NLK-204ENST00000583517 INPP4AQ96PE3 977 aaPredicted RBP13.74□□□□□ -0.21
NLK-204ENST00000583517 ZBED2Q9BTP6 218 aa13.74□□□□□ -0.21
NLK-204ENST00000583517 BCAS3Q9H6U6 928 aa13.74□□□□□ -0.21
NLK-204ENST00000583517 MLXIPQ9HAP2 919 aa13.74□□□□□ -0.21
NLK-204ENST00000583517 LMCD1Q9NZU5 365 aa13.74□□□□□ -0.21
NLK-204ENST00000583517 MYH7BA7E2Y1 1941 aa13.74□□□□□ -0.21
NLK-204ENST00000583517 H3BRB1 525 aa13.73□□□□□ -0.21
NLK-204ENST00000583517 SGSM2O43147 1006 aa13.73□□□□□ -0.21
NLK-204ENST00000583517 LGR5O75473 907 aa13.73□□□□□ -0.21
NLK-204ENST00000583517 STAM2O75886 525 aa13.73□□□□□ -0.21
NLK-204ENST00000583517 LGALS2P05162 132 aa13.73□□□□□ -0.21
NLK-204ENST00000583517 ICAM3P32942 547 aa13.73□□□□□ -0.21
NLK-204ENST00000583517 ANTXR2P58335 489 aa13.73□□□□□ -0.21
NLK-204ENST00000583517 ERVK-21P61565 698 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms