RNA–Protein interactions for RNA: ENST00000582100.1

CCDC57-215, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-215ENST00000582100 CTAGE1Q96RT6 745 aa17.73■□□□□ 0.43
CCDC57-215ENST00000582100 GTF2IRD1Q9UHL9 959 aa17.73■□□□□ 0.43
CCDC57-215ENST00000582100 SLC12A7Q9Y666 1083 aa17.73■□□□□ 0.43
CCDC57-215ENST00000582100 PLEKHA8P1O95397 391 aa17.72■□□□□ 0.43
CCDC57-215ENST00000582100 ACTN1P12814 892 aa17.72■□□□□ 0.43
CCDC57-215ENST00000582100 ICAM3P32942 547 aa17.72■□□□□ 0.43
CCDC57-215ENST00000582100 MRPS9P82933 396 aaKnown RBP17.72■□□□□ 0.43
CCDC57-215ENST00000582100 RBL2Q08999 1139 aa17.72■□□□□ 0.43
CCDC57-215ENST00000582100 MFSD10Q14728 455 aa17.72■□□□□ 0.43
CCDC57-215ENST00000582100 HSDL1Q3SXM5 330 aa17.72■□□□□ 0.43
CCDC57-215ENST00000582100 GNPTABQ3T906 1256 aa17.72■□□□□ 0.43
CCDC57-215ENST00000582100 SGMS1Q86VZ5 419 aa17.72■□□□□ 0.43
CCDC57-215ENST00000582100 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.72■□□□□ 0.43
CCDC57-215ENST00000582100 C7orf31Q8N865 590 aa17.72■□□□□ 0.43
CCDC57-215ENST00000582100 AFAP1L1Q8TED9 768 aa17.72■□□□□ 0.43
CCDC57-215ENST00000582100 CUL5Q93034 780 aa17.72■□□□□ 0.43
CCDC57-215ENST00000582100 INPP4AQ96PE3 977 aaPredicted RBP17.72■□□□□ 0.43
CCDC57-215ENST00000582100 HDAC6Q9UBN7 1215 aa17.72■□□□□ 0.43
CCDC57-215ENST00000582100 PRUNE2Q8WUY3 3088 aa17.72■□□□□ 0.43
CCDC57-215ENST00000582100 SCN5AQ14524 2016 aa17.71■□□□□ 0.43
CCDC57-215ENST00000582100 ZBBXA8MT70 800 aa17.71■□□□□ 0.43
CCDC57-215ENST00000582100 MEIS2O14770 477 aa17.71■□□□□ 0.43
CCDC57-215ENST00000582100 ZNF286BP0CG31 522 aa17.71■□□□□ 0.43
CCDC57-215ENST00000582100 KIAA0753Q2KHM9 967 aa17.71■□□□□ 0.43
CCDC57-215ENST00000582100 XRRA1Q6P2D8 792 aa17.71■□□□□ 0.43
CCDC57-215ENST00000582100 USP17L6PQ6QN14 398 aa17.71■□□□□ 0.43
CCDC57-215ENST00000582100 FANCBQ8NB91 859 aa17.71■□□□□ 0.43
CCDC57-215ENST00000582100 SMARCC2Q8TAQ2 1214 aa17.71■□□□□ 0.43
CCDC57-215ENST00000582100 GPKOWQ92917 476 aaPredicted RBP eCLIP17.71■□□□□ 0.43
CCDC57-215ENST00000582100 ZFP91Q96JP5 570 aaPredicted RBP17.71■□□□□ 0.43
CCDC57-215ENST00000582100 NEK1Q96PY6 1258 aa17.71■□□□□ 0.43
CCDC57-215ENST00000582100 ALG1Q9BT22 464 aa17.71■□□□□ 0.43
CCDC57-215ENST00000582100 LRRC2Q9BYS8 371 aa17.71■□□□□ 0.43
CCDC57-215ENST00000582100 MLXIPQ9HAP2 919 aa17.71■□□□□ 0.43
CCDC57-215ENST00000582100 CHD9Q3L8U1 2897 aa17.7■□□□□ 0.42
CCDC57-215ENST00000582100 TANC1Q9C0D5 1861 aa17.7■□□□□ 0.42
CCDC57-215ENST00000582100 SPATA31C2B4DYI2 1134 aa17.7■□□□□ 0.42
CCDC57-215ENST00000582100 PARNO95453 639 aaKnown RBP17.7■□□□□ 0.42
CCDC57-215ENST00000582100 ATP2A2P16615 1042 aaKnown RBP17.7■□□□□ 0.42
CCDC57-215ENST00000582100 RXRAP19793 462 aa17.7■□□□□ 0.42
CCDC57-215ENST00000582100 TSGA10IPQ3SY00 556 aa17.7■□□□□ 0.42
CCDC57-215ENST00000582100 PCNX4Q63HM2 1172 aa17.7■□□□□ 0.42
CCDC57-215ENST00000582100 CMTR1Q8N1G2 835 aaKnown RBP17.7■□□□□ 0.42
CCDC57-215ENST00000582100 SLC28A3Q9HAS3 691 aa17.7■□□□□ 0.42
CCDC57-215ENST00000582100 YBX2Q9Y2T7 364 aaKnown RBP17.7■□□□□ 0.42
CCDC57-215ENST00000582100 PCDHA11Q9Y5I1 949 aa17.7■□□□□ 0.42
CCDC57-215ENST00000582100 TRIP12Q14669 1992 aaPredicted RBP17.7■□□□□ 0.42
CCDC57-215ENST00000582100 FIBPO43427 364 aa17.69■□□□□ 0.42
CCDC57-215ENST00000582100 SORBS3O60504 671 aa17.69■□□□□ 0.42
CCDC57-215ENST00000582100 CDC45O75419 566 aa17.69■□□□□ 0.42
CCDC57-215ENST00000582100 SELPP16109 830 aa17.69■□□□□ 0.42
CCDC57-215ENST00000582100 EXOSC10Q01780 885 aaKnown RBP17.69■□□□□ 0.42
CCDC57-215ENST00000582100 NEDD9Q14511 834 aa17.69■□□□□ 0.42
CCDC57-215ENST00000582100 SYNE3Q6ZMZ3 975 aa17.69■□□□□ 0.42
CCDC57-215ENST00000582100 TMTC3Q6ZXV5 915 aa17.69■□□□□ 0.42
CCDC57-215ENST00000582100 DHX38Q92620 1227 aaKnown RBP17.69■□□□□ 0.42
CCDC57-215ENST00000582100 C16orf70Q9BSU1 422 aa17.69■□□□□ 0.42
CCDC57-215ENST00000582100 FTOQ9C0B1 505 aaKnown RBP eCLIP17.69■□□□□ 0.42
CCDC57-215ENST00000582100 NKX2-4Q9H2Z4 354 aa17.69■□□□□ 0.42
CCDC57-215ENST00000582100 PSTPIP2Q9H939 334 aa17.69■□□□□ 0.42
CCDC57-215ENST00000582100 RTEL1Q9NZ71 1219 aa17.69■□□□□ 0.42
CCDC57-215ENST00000582100 CKBP12277 381 aa17.68■□□□□ 0.42
CCDC57-215ENST00000582100 RABGGTBP53611 331 aa17.68■□□□□ 0.42
CCDC57-215ENST00000582100 SEMA3FQ13275 785 aa17.68■□□□□ 0.42
CCDC57-215ENST00000582100 PTK7Q13308 1070 aa17.68■□□□□ 0.42
CCDC57-215ENST00000582100 GPNMBQ14956 572 aa17.68■□□□□ 0.42
CCDC57-215ENST00000582100 METTL7BQ6UX53 244 aa17.68■□□□□ 0.42
CCDC57-215ENST00000582100 DHX32Q7L7V1 743 aaKnown RBP17.68■□□□□ 0.42
CCDC57-215ENST00000582100 PHOSPHO2Q8TCD6 241 aa17.68■□□□□ 0.42
CCDC57-215ENST00000582100 GBF1Q92538 1859 aa17.68■□□□□ 0.42
CCDC57-215ENST00000582100 SLC9A7Q96T83 725 aa17.68■□□□□ 0.42
CCDC57-215ENST00000582100 GAS2L1Q99501 681 aaPredicted RBP17.68■□□□□ 0.42
CCDC57-215ENST00000582100 SENP7Q9BQF6 1050 aa17.68■□□□□ 0.42
CCDC57-215ENST00000582100 BCAS3Q9H6U6 928 aa17.68■□□□□ 0.42
CCDC57-215ENST00000582100 H3BRB1 525 aa17.67■□□□□ 0.42
CCDC57-215ENST00000582100 NOP56O00567 594 aaKnown RBP17.67■□□□□ 0.42
CCDC57-215ENST00000582100 BAIAP3O94812 1187 aa17.67■□□□□ 0.42
CCDC57-215ENST00000582100 KRT32Q14532 448 aa17.67■□□□□ 0.42
CCDC57-215ENST00000582100 APOA5Q6Q788 366 aa17.67■□□□□ 0.42
CCDC57-215ENST00000582100 LRRC8DQ7L1W4 858 aa17.67■□□□□ 0.42
CCDC57-215ENST00000582100 CYFIP1Q7L576 1253 aa17.67■□□□□ 0.42
CCDC57-215ENST00000582100 MICU3Q86XE3 530 aa17.67■□□□□ 0.42
CCDC57-215ENST00000582100 RAB11FIP4Q86YS3 637 aa17.67■□□□□ 0.42
CCDC57-215ENST00000582100 RASEFQ8IZ41 740 aa17.67■□□□□ 0.42
CCDC57-215ENST00000582100 CCDC82Q8N4S0 544 aa17.67■□□□□ 0.42
CCDC57-215ENST00000582100 USP26Q9BXU7 913 aa17.67■□□□□ 0.42
CCDC57-215ENST00000582100 PRDM12Q9H4Q4 367 aa17.67■□□□□ 0.42
CCDC57-215ENST00000582100 TUT1Q9H6E5 874 aaKnown RBP17.67■□□□□ 0.42
CCDC57-215ENST00000582100 RBM28Q9NW13 759 aaKnown RBP17.67■□□□□ 0.42
CCDC57-215ENST00000582100 TET1Q8NFU7 2136 aa17.66■□□□□ 0.42
CCDC57-215ENST00000582100 CXCL10P02778 98 aa17.66■□□□□ 0.42
CCDC57-215ENST00000582100 ZNF200P98182 395 aaPredicted RBP17.66■□□□□ 0.42
CCDC57-215ENST00000582100 TRIM71Q2Q1W2 868 aaKnown RBP17.66■□□□□ 0.42
CCDC57-215ENST00000582100 NLRX1Q86UT6 975 aa17.66■□□□□ 0.42
CCDC57-215ENST00000582100 CHD7Q9P2D1 2997 aa17.66■□□□□ 0.42
CCDC57-215ENST00000582100 hCG_1642624A0A1W2PR95 340 aa17.65■□□□□ 0.42
CCDC57-215ENST00000582100 LGALS2P05162 132 aa17.65■□□□□ 0.42
CCDC57-215ENST00000582100 MYOGP15173 224 aa17.65■□□□□ 0.42
CCDC57-215ENST00000582100 HOXC8P31273 242 aa17.65■□□□□ 0.42
CCDC57-215ENST00000582100 HIC1Q14526 733 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms