RNA–Protein interactions for RNA: ENST00000581705.5

SNX11-209, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 1,426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-209ENST00000581705 RIC8AQ9NPQ8 531 aa23.4■■□□□ 1.34
SNX11-209ENST00000581705 PDLIM7Q9NR12 457 aa23.4■■□□□ 1.34
SNX11-209ENST00000581705 LMBRD1Q9NUN5 540 aa23.4■■□□□ 1.34
SNX11-209ENST00000581705 CYP39A1Q9NYL5 469 aa23.4■■□□□ 1.34
SNX11-209ENST00000581705 RCOR1Q9UKL0 485 aa23.4■■□□□ 1.34
SNX11-209ENST00000581705 PCDHA1Q9Y5I3 950 aa23.4■■□□□ 1.34
SNX11-209ENST00000581705 FIBPO43427 364 aa23.39■■□□□ 1.33
SNX11-209ENST00000581705 CST5P28325 142 aaPredicted RBP23.39■■□□□ 1.33
SNX11-209ENST00000581705 ACLYP53396 1101 aa23.39■■□□□ 1.33
SNX11-209ENST00000581705 KRT25Q7Z3Z0 450 aa23.39■■□□□ 1.33
SNX11-209ENST00000581705 LEO1Q8WVC0 666 aaPredicted RBP23.39■■□□□ 1.33
SNX11-209ENST00000581705 CUL5Q93034 780 aa23.39■■□□□ 1.33
SNX11-209ENST00000581705 SPATA32Q96LK8 384 aa23.39■■□□□ 1.33
SNX11-209ENST00000581705 USP28Q96RU2 1077 aa23.39■■□□□ 1.33
SNX11-209ENST00000581705 PRDM5Q9NQX1 630 aaPredicted RBP23.39■■□□□ 1.33
SNX11-209ENST00000581705 ASTN1O14525 1302 aa23.38■■□□□ 1.33
SNX11-209ENST00000581705 MOXD2PA6NHM9 499 aa23.38■■□□□ 1.33
SNX11-209ENST00000581705 ASB14A6NK59 587 aa23.38■■□□□ 1.33
SNX11-209ENST00000581705 BMP15O95972 392 aa23.38■■□□□ 1.33
SNX11-209ENST00000581705 REXO1Q8N1G1 1221 aaKnown RBP23.38■■□□□ 1.33
SNX11-209ENST00000581705 UPF3AQ9H1J1 476 aaKnown RBP23.38■■□□□ 1.33
SNX11-209ENST00000581705 LTBP2Q14767 1821 aa23.38■■□□□ 1.33
SNX11-209ENST00000581705 MYADML2A6NDP7 307 aa23.37■■□□□ 1.33
SNX11-209ENST00000581705 PRPF40AO75400 957 aaKnown RBP23.37■■□□□ 1.33
SNX11-209ENST00000581705 GJA9P57773 515 aa23.37■■□□□ 1.33
SNX11-209ENST00000581705 KCNA10Q16322 511 aa23.37■■□□□ 1.33
SNX11-209ENST00000581705 SH3RF1Q7Z6J0 888 aa23.37■■□□□ 1.33
SNX11-209ENST00000581705 KCNG4Q8TDN1 519 aa23.37■■□□□ 1.33
SNX11-209ENST00000581705 CHAMP1Q96JM3 812 aa23.37■■□□□ 1.33
SNX11-209ENST00000581705 PCDHA6Q9UN73 950 aa23.37■■□□□ 1.33
SNX11-209ENST00000581705 PCDHA8Q9Y5H6 950 aa23.37■■□□□ 1.33
SNX11-209ENST00000581705 CCDC194A0A1B0GVG4 234 aa23.36■■□□□ 1.33
SNX11-209ENST00000581705 TRIM43BA6NCK2 446 aa23.36■■□□□ 1.33
SNX11-209ENST00000581705 MBD3O95983 291 aa23.36■■□□□ 1.33
SNX11-209ENST00000581705 UBE2HP62256 183 aa23.36■■□□□ 1.33
SNX11-209ENST00000581705 TRIM43Q96BQ3 446 aaPredicted RBP23.36■■□□□ 1.33
SNX11-209ENST00000581705 PSTPIP2Q9H939 334 aa23.36■■□□□ 1.33
SNX11-209ENST00000581705 SPC25Q9HBM1 224 aa23.36■■□□□ 1.33
SNX11-209ENST00000581705 STARD7Q9NQZ5 370 aa23.36■■□□□ 1.33
SNX11-209ENST00000581705 TFIP11Q9UBB9 837 aaKnown RBP23.36■■□□□ 1.33
SNX11-209ENST00000581705 CEP131Q9UPN4 1083 aa23.36■■□□□ 1.33
SNX11-209ENST00000581705 ABCB11O95342 1321 aa23.36■■□□□ 1.33
SNX11-209ENST00000581705 C6orf222P0C671 652 aaPredicted RBP23.35■■□□□ 1.33
SNX11-209ENST00000581705 NKX3-2P78367 333 aa23.35■■□□□ 1.33
SNX11-209ENST00000581705 IRX5P78411 483 aaPredicted RBP23.35■■□□□ 1.33
SNX11-209ENST00000581705 NSMFQ6X4W1 530 aa23.35■■□□□ 1.33
SNX11-209ENST00000581705 SAMD3Q8N6K7 520 aa23.35■■□□□ 1.33
SNX11-209ENST00000581705 PCSK9Q8NBP7 692 aaKnown RBP23.35■■□□□ 1.33
SNX11-209ENST00000581705 LINC00301Q8NCQ3 95 aa23.35■■□□□ 1.33
SNX11-209ENST00000581705 MAF1Q9H063 256 aa23.35■■□□□ 1.33
SNX11-209ENST00000581705 MRPL11Q9Y3B7 192 aaKnown RBP23.35■■□□□ 1.33
SNX11-209ENST00000581705 CLTBP09497 229 aa23.34■■□□□ 1.33
SNX11-209ENST00000581705 CLK2P49760 499 aaKnown RBP23.34■■□□□ 1.33
SNX11-209ENST00000581705 ORC2Q13416 577 aaPredicted RBP23.34■■□□□ 1.33
SNX11-209ENST00000581705 SLC39A14Q15043 492 aa23.34■■□□□ 1.33
SNX11-209ENST00000581705 ANKRD33Q7Z3H0 272 aa23.34■■□□□ 1.33
SNX11-209ENST00000581705 BADQ92934 168 aa23.34■■□□□ 1.33
SNX11-209ENST00000581705 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.34■■□□□ 1.33
SNX11-209ENST00000581705 LAMA2P24043 3122 aaKnown RBP23.34■■□□□ 1.33
SNX11-209ENST00000581705 PIK3CDO00329 1044 aa23.33■■□□□ 1.33
SNX11-209ENST00000581705 CTAGE5O15320 804 aa23.33■■□□□ 1.33
SNX11-209ENST00000581705 PQBP1O60828 265 aaKnown RBP23.33■■□□□ 1.33
SNX11-209ENST00000581705 ASGR1P07306 291 aa23.33■■□□□ 1.33
SNX11-209ENST00000581705 TOB1P50616 345 aaPredicted RBP23.33■■□□□ 1.33
SNX11-209ENST00000581705 TNFAIP2Q03169 654 aa23.33■■□□□ 1.33
SNX11-209ENST00000581705 AP3B2Q13367 1082 aa23.33■■□□□ 1.33
SNX11-209ENST00000581705 STK38Q15208 465 aa23.33■■□□□ 1.33
SNX11-209ENST00000581705 GNASQ5JWF2 1037 aa23.33■■□□□ 1.33
SNX11-209ENST00000581705 MORC4Q8TE76 937 aa23.33■■□□□ 1.33
SNX11-209ENST00000581705 GLT1D1Q96MS3 346 aa23.33■■□□□ 1.33
SNX11-209ENST00000581705 TOX2Q96NM4 488 aa23.33■■□□□ 1.33
SNX11-209ENST00000581705 PURBQ96QR8 312 aaKnown RBP23.33■■□□□ 1.33
SNX11-209ENST00000581705 GDPD2Q9HCC8 539 aa23.33■■□□□ 1.33
SNX11-209ENST00000581705 DDX49Q9Y6V7 483 aaKnown RBP23.33■■□□□ 1.33
SNX11-209ENST00000581705 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.33■■□□□ 1.32
SNX11-209ENST00000581705 NFIBO00712 420 aa23.33■■□□□ 1.32
SNX11-209ENST00000581705 KIAA0355O15063 1070 aa23.33■■□□□ 1.32
SNX11-209ENST00000581705 PPP6R2O75170 966 aa23.33■■□□□ 1.32
SNX11-209ENST00000581705 BAATQ14032 418 aaPredicted RBP23.33■■□□□ 1.32
SNX11-209ENST00000581705 NONOQ15233 471 aaKnown RBP eCLIP23.33■■□□□ 1.32
SNX11-209ENST00000581705 PIK3AP1Q6ZUJ8 805 aa23.33■■□□□ 1.32
SNX11-209ENST00000581705 GNEQ9Y223 722 aaKnown RBP23.33■■□□□ 1.32
SNX11-209ENST00000581705 FOSP01100 380 aaPredicted RBP23.32■■□□□ 1.32
SNX11-209ENST00000581705 SF3A1Q15459 793 aaKnown RBP23.32■■□□□ 1.32
SNX11-209ENST00000581705 KLHL40Q2TBA0 621 aa23.32■■□□□ 1.32
SNX11-209ENST00000581705 CLEC4DQ8WXI8 215 aa23.32■■□□□ 1.32
SNX11-209ENST00000581705 MAP3K20Q9NYL2 800 aaKnown RBP23.32■■□□□ 1.32
SNX11-209ENST00000581705 CLIC4Q9Y696 253 aa23.32■■□□□ 1.32
SNX11-209ENST00000581705 LCTP09848 1927 aa23.31■■□□□ 1.32
SNX11-209ENST00000581705 LOC102724159A0A0B4J2E5 919 aa23.31■■□□□ 1.32
SNX11-209ENST00000581705 SPTLC2O15270 562 aa23.31■■□□□ 1.32
SNX11-209ENST00000581705 TRAK2O60296 914 aa23.31■■□□□ 1.32
SNX11-209ENST00000581705 ITGB8P26012 769 aa23.31■■□□□ 1.32
SNX11-209ENST00000581705 GHRHRQ02643 423 aa23.31■■□□□ 1.32
SNX11-209ENST00000581705 FAAP100Q0VG06 881 aa23.31■■□□□ 1.32
SNX11-209ENST00000581705 PTPAQ15257 358 aa23.31■■□□□ 1.32
SNX11-209ENST00000581705 PWP2Q15269 919 aaKnown RBP23.31■■□□□ 1.32
SNX11-209ENST00000581705 EARS2Q5JPH6 523 aaKnown RBP23.31■■□□□ 1.32
SNX11-209ENST00000581705 TTC38Q5R3I4 469 aa23.31■■□□□ 1.32
SNX11-209ENST00000581705 TAPT1Q6NXT6 567 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms