RNA–Protein interactions for RNA: ENST00000580904.1

PSMD11-209, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 4

Gene PSMD11, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-209ENST00000580904 ZNF287Q9HBT7 754 aa8.47□□□□□ -1.05
PSMD11-209ENST00000580904 SWAP70Q9UH65 585 aa8.47□□□□□ -1.05
PSMD11-209ENST00000580904 MKL2Q9ULH7 1088 aa8.47□□□□□ -1.05
PSMD11-209ENST00000580904 SPDYE3A6NKU9 549 aa8.46□□□□□ -1.06
PSMD11-209ENST00000580904 B4E1Z4 1266 aa8.46□□□□□ -1.06
PSMD11-209ENST00000580904 RNF225M0QZC1 329 aaPredicted RBP8.46□□□□□ -1.06
PSMD11-209ENST00000580904 TRAF5O00463 557 aa8.46□□□□□ -1.06
PSMD11-209ENST00000580904 HMGB1P09429 215 aaKnown RBP8.46□□□□□ -1.06
PSMD11-209ENST00000580904 CPB1P15086 417 aa8.46□□□□□ -1.06
PSMD11-209ENST00000580904 CASTP20810 708 aaKnown RBP8.46□□□□□ -1.06
PSMD11-209ENST00000580904 PSMA5P28066 241 aa8.46□□□□□ -1.06
PSMD11-209ENST00000580904 NT5C2P49902 561 aa8.46□□□□□ -1.06
PSMD11-209ENST00000580904 PLCB3Q01970 1234 aa8.46□□□□□ -1.06
PSMD11-209ENST00000580904 RRP12Q5JTH9 1297 aaKnown RBP8.46□□□□□ -1.06
PSMD11-209ENST00000580904 TATDN1Q6P1N9 297 aa8.46□□□□□ -1.06
PSMD11-209ENST00000580904 MIGA2Q7L4E1 593 aa8.46□□□□□ -1.06
PSMD11-209ENST00000580904 RALYLQ86SE5 291 aaKnown RBP8.46□□□□□ -1.06
PSMD11-209ENST00000580904 MB21D2Q8IYB1 491 aaPredicted RBP8.46□□□□□ -1.06
PSMD11-209ENST00000580904 NCOA7Q8NI08 942 aa8.46□□□□□ -1.06
PSMD11-209ENST00000580904 ESR2Q92731 530 aa8.46□□□□□ -1.06
PSMD11-209ENST00000580904 ASB16Q96NS5 453 aa8.46□□□□□ -1.06
PSMD11-209ENST00000580904 NSUN5Q96P11 429 aaKnown RBP8.46□□□□□ -1.06
PSMD11-209ENST00000580904 KRT23Q9C075 422 aa8.46□□□□□ -1.06
PSMD11-209ENST00000580904 DNAJC25Q9H1X3 360 aa8.46□□□□□ -1.06
PSMD11-209ENST00000580904 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.46□□□□□ -1.06
PSMD11-209ENST00000580904 TOMM22Q9NS69 142 aa8.46□□□□□ -1.06
PSMD11-209ENST00000580904 ZSWIM5Q9P217 1185 aa8.46□□□□□ -1.06
PSMD11-209ENST00000580904 A6NHS1 94 aa8.45□□□□□ -1.06
PSMD11-209ENST00000580904 RANBP6O60518 1105 aaKnown RBP8.45□□□□□ -1.06
PSMD11-209ENST00000580904 CPNE3O75131 537 aaKnown RBP8.45□□□□□ -1.06
PSMD11-209ENST00000580904 SMNDC1O75940 238 aaKnown RBP eCLIP8.45□□□□□ -1.06
PSMD11-209ENST00000580904 CPA1P15085 419 aa8.45□□□□□ -1.06
PSMD11-209ENST00000580904 ERCC3P19447 782 aa8.45□□□□□ -1.06
PSMD11-209ENST00000580904 RPS6KB1P23443 525 aa8.45□□□□□ -1.06
PSMD11-209ENST00000580904 LORP23490 312 aaPredicted RBP8.45□□□□□ -1.06
PSMD11-209ENST00000580904 MCM5P33992 734 aa8.45□□□□□ -1.06
PSMD11-209ENST00000580904 NF2P35240 595 aa8.45□□□□□ -1.06
PSMD11-209ENST00000580904 ANTXR2P58335 489 aa8.45□□□□□ -1.06
PSMD11-209ENST00000580904 FGD1P98174 961 aa8.45□□□□□ -1.06
PSMD11-209ENST00000580904 MLLT1Q03111 559 aaPredicted RBP8.45□□□□□ -1.06
PSMD11-209ENST00000580904 RRP1BQ14684 758 aaKnown RBP8.45□□□□□ -1.06
PSMD11-209ENST00000580904 CERKLQ49MI3 558 aaPredicted RBP8.45□□□□□ -1.06
PSMD11-209ENST00000580904 FAM47AQ5JRC9 791 aa8.45□□□□□ -1.06
PSMD11-209ENST00000580904 DCAF15Q66K64 600 aa8.45□□□□□ -1.06
PSMD11-209ENST00000580904 PSAPL1Q6NUJ1 521 aa8.45□□□□□ -1.06
PSMD11-209ENST00000580904 BLOC1S2Q6QNY1 142 aa8.45□□□□□ -1.06
PSMD11-209ENST00000580904 RUFY3Q7L099 469 aa8.45□□□□□ -1.06
PSMD11-209ENST00000580904 CYB5R4Q7L1T6 521 aa8.45□□□□□ -1.06
PSMD11-209ENST00000580904 TMC7Q7Z402 723 aa8.45□□□□□ -1.06
PSMD11-209ENST00000580904 ZNF444Q8N0Y2 327 aaPredicted RBP8.45□□□□□ -1.06
PSMD11-209ENST00000580904 C1orf127Q8N9H9 656 aa8.45□□□□□ -1.06
PSMD11-209ENST00000580904 TTC9Q92623 222 aa8.45□□□□□ -1.06
PSMD11-209ENST00000580904 CCDC17Q96LX7 622 aa8.45□□□□□ -1.06
PSMD11-209ENST00000580904 ZNF341Q9BYN7 854 aa8.45□□□□□ -1.06
PSMD11-209ENST00000580904 UPF3BQ9BZI7 483 aaKnown RBP8.45□□□□□ -1.06
PSMD11-209ENST00000580904 PRDM6Q9NQX0 595 aa8.45□□□□□ -1.06
PSMD11-209ENST00000580904 CYP46A1Q9Y6A2 500 aa8.45□□□□□ -1.06
PSMD11-209ENST00000580904 TSPY2A6NKD2 308 aa8.44□□□□□ -1.06
PSMD11-209ENST00000580904 ZBTB42B2RXF5 422 aa8.44□□□□□ -1.06
PSMD11-209ENST00000580904 M0R082 166 aa8.44□□□□□ -1.06
PSMD11-209ENST00000580904 PRC1O43663 620 aa8.44□□□□□ -1.06
PSMD11-209ENST00000580904 KIF4AO95239 1232 aa8.44□□□□□ -1.06
PSMD11-209ENST00000580904 AKR1B1P15121 316 aa8.44□□□□□ -1.06
PSMD11-209ENST00000580904 JAG1P78504 1218 aa8.44□□□□□ -1.06
PSMD11-209ENST00000580904 TFAP4Q01664 338 aa8.44□□□□□ -1.06
PSMD11-209ENST00000580904 EXOSC10Q01780 885 aaKnown RBP8.44□□□□□ -1.06
PSMD11-209ENST00000580904 FMR1Q06787 632 aaKnown RBP eCLIP8.44□□□□□ -1.06
PSMD11-209ENST00000580904 RABEP1Q15276 862 aa8.44□□□□□ -1.06
PSMD11-209ENST00000580904 SHROOM1Q2M3G4 852 aaPredicted RBP8.44□□□□□ -1.06
PSMD11-209ENST00000580904 CHST3Q7LGC8 479 aa8.44□□□□□ -1.06
PSMD11-209ENST00000580904 ZNF417Q8TAU3 575 aa8.44□□□□□ -1.06
PSMD11-209ENST00000580904 ZNF587Q96SQ5 575 aaPredicted RBP8.44□□□□□ -1.06
PSMD11-209ENST00000580904 NIF3L1Q9GZT8 377 aa8.44□□□□□ -1.06
PSMD11-209ENST00000580904 ZFYVE28Q9HCC9 887 aa8.44□□□□□ -1.06
PSMD11-209ENST00000580904 JPH1Q9HDC5 661 aaPredicted RBP8.44□□□□□ -1.06
PSMD11-209ENST00000580904 NOP53Q9NZM5 478 aaKnown RBP8.44□□□□□ -1.06
PSMD11-209ENST00000580904 CNTN3Q9P232 1028 aa8.44□□□□□ -1.06
PSMD11-209ENST00000580904 ZNF112Q9UJU3 913 aa8.44□□□□□ -1.06
PSMD11-209ENST00000580904 FZD1Q9UP38 647 aa8.44□□□□□ -1.06
PSMD11-209ENST00000580904 WDR19Q8NEZ3 1342 aa8.44□□□□□ -1.06
PSMD11-209ENST00000580904 PLIN4Q96Q06 1357 aa8.44□□□□□ -1.06
PSMD11-209ENST00000580904 MYH8P13535 1937 aa8.43□□□□□ -1.06
PSMD11-209ENST00000580904 MPHOSPH10O00566 681 aaKnown RBP8.43□□□□□ -1.06
PSMD11-209ENST00000580904 GNB5O14775 395 aa8.43□□□□□ -1.06
PSMD11-209ENST00000580904 USP2O75604 605 aaPredicted RBP8.43□□□□□ -1.06
PSMD11-209ENST00000580904 GDF11O95390 407 aa8.43□□□□□ -1.06
PSMD11-209ENST00000580904 GH2P01242 217 aa8.43□□□□□ -1.06
PSMD11-209ENST00000580904 TSPY3P0CV98 308 aa8.43□□□□□ -1.06
PSMD11-209ENST00000580904 TSPY8P0CW00 308 aa8.43□□□□□ -1.06
PSMD11-209ENST00000580904 CAP2P40123 477 aa8.43□□□□□ -1.06
PSMD11-209ENST00000580904 NEK4P51957 841 aa8.43□□□□□ -1.06
PSMD11-209ENST00000580904 PRKG1Q13976 671 aa8.43□□□□□ -1.06
PSMD11-209ENST00000580904 ABCB5Q2M3G0 1257 aa8.43□□□□□ -1.06
PSMD11-209ENST00000580904 TMCO4Q5TGY1 634 aa8.43□□□□□ -1.06
PSMD11-209ENST00000580904 TMEM179Q6ZVK1 233 aa8.43□□□□□ -1.06
PSMD11-209ENST00000580904 HFE2Q6ZVN8 426 aa8.43□□□□□ -1.06
PSMD11-209ENST00000580904 IQCA1Q86XH1 822 aa8.43□□□□□ -1.06
PSMD11-209ENST00000580904 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.43□□□□□ -1.06
PSMD11-209ENST00000580904 PLD4Q96BZ4 506 aa8.43□□□□□ -1.06
PSMD11-209ENST00000580904 TMEM87BQ96K49 555 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms