RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 ASGR1P07306 291 aa24.78■■□□□ 1.56
CDC42EP4-203ENST00000578516 ACLYP53396 1101 aa24.78■■□□□ 1.56
CDC42EP4-203ENST00000578516 NR5A1Q13285 461 aa24.78■■□□□ 1.56
CDC42EP4-203ENST00000578516 KRT40Q6A162 431 aa24.78■■□□□ 1.56
CDC42EP4-203ENST00000578516 CXCL17Q6UXB2 119 aa24.78■■□□□ 1.56
CDC42EP4-203ENST00000578516 LLPHQ9BRT6 129 aaKnown RBP24.78■■□□□ 1.56
CDC42EP4-203ENST00000578516 SCN10AQ9Y5Y9 1956 aa24.78■■□□□ 1.56
CDC42EP4-203ENST00000578516 PDE4DIPQ5VU43 2346 aa24.78■■□□□ 1.56
CDC42EP4-203ENST00000578516 TNRC18O15417 2968 aaPredicted RBP24.78■■□□□ 1.56
CDC42EP4-203ENST00000578516 SPATA31C2B4DYI2 1134 aa24.77■■□□□ 1.56
CDC42EP4-203ENST00000578516 ATP9AO75110 1047 aa24.77■■□□□ 1.56
CDC42EP4-203ENST00000578516 GH1P01241 217 aa24.77■■□□□ 1.56
CDC42EP4-203ENST00000578516 ARP10275 920 aa24.77■■□□□ 1.56
CDC42EP4-203ENST00000578516 BICD2Q8TD16 824 aa24.77■■□□□ 1.56
CDC42EP4-203ENST00000578516 WASF1Q92558 559 aa24.77■■□□□ 1.56
CDC42EP4-203ENST00000578516 SPC25Q9HBM1 224 aa24.77■■□□□ 1.56
CDC42EP4-203ENST00000578516 FAM86B1E9PN63 330 aa24.76■■□□□ 1.55
CDC42EP4-203ENST00000578516 FIBPO43427 364 aa24.76■■□□□ 1.55
CDC42EP4-203ENST00000578516 MYL3P08590 195 aa24.76■■□□□ 1.55
CDC42EP4-203ENST00000578516 FAM86B2P0C5J1 330 aa24.76■■□□□ 1.55
CDC42EP4-203ENST00000578516 ICAM3P32942 547 aa24.76■■□□□ 1.55
CDC42EP4-203ENST00000578516 PSMC6P62333 389 aa24.76■■□□□ 1.55
CDC42EP4-203ENST00000578516 NKX3-2P78367 333 aa24.76■■□□□ 1.55
CDC42EP4-203ENST00000578516 SP4Q02446 784 aa24.76■■□□□ 1.55
CDC42EP4-203ENST00000578516 GNPTABQ3T906 1256 aa24.76■■□□□ 1.55
CDC42EP4-203ENST00000578516 MXRA8Q9BRK3 442 aa24.76■■□□□ 1.55
CDC42EP4-203ENST00000578516 JADE2Q9NQC1 790 aa24.76■■□□□ 1.55
CDC42EP4-203ENST00000578516 WDR81Q562E7 1941 aa24.75■■□□□ 1.55
CDC42EP4-203ENST00000578516 NKRFO15226 690 aaKnown RBP eCLIP24.75■■□□□ 1.553e-12■■■□□ 15.8
CDC42EP4-203ENST00000578516 INF2Q27J81 1249 aa24.75■■□□□ 1.55
CDC42EP4-203ENST00000578516 XRRA1Q6P2D8 792 aa24.75■■□□□ 1.55
CDC42EP4-203ENST00000578516 DHX37Q8IY37 1157 aaKnown RBP24.75■■□□□ 1.55
CDC42EP4-203ENST00000578516 TBCKQ8TEA7 893 aa24.75■■□□□ 1.55
CDC42EP4-203ENST00000578516 Q9Y3F1 56 aa24.75■■□□□ 1.55
CDC42EP4-203ENST00000578516 IGLV3-22A0A075B6J6 115 aa24.74■■□□□ 1.55
CDC42EP4-203ENST00000578516 STAM2O75886 525 aa24.74■■□□□ 1.55
CDC42EP4-203ENST00000578516 MMP1P03956 469 aa24.74■■□□□ 1.55
CDC42EP4-203ENST00000578516 MMP3P08254 477 aa24.74■■□□□ 1.55
CDC42EP4-203ENST00000578516 KCNA2P16389 499 aa24.74■■□□□ 1.55
CDC42EP4-203ENST00000578516 MCM2P49736 904 aa24.74■■□□□ 1.55
CDC42EP4-203ENST00000578516 MTMR1Q13613 665 aa24.74■■□□□ 1.55
CDC42EP4-203ENST00000578516 HSDL1Q3SXM5 330 aa24.74■■□□□ 1.55
CDC42EP4-203ENST00000578516 CELF3Q5SZQ8 465 aaKnown RBP24.74■■□□□ 1.55
CDC42EP4-203ENST00000578516 CYFIP1Q7L576 1253 aa24.74■■□□□ 1.55
CDC42EP4-203ENST00000578516 NLRX1Q86UT6 975 aa24.74■■□□□ 1.55
CDC42EP4-203ENST00000578516 TNFRSF25Q93038 417 aa24.74■■□□□ 1.55
CDC42EP4-203ENST00000578516 GPRASP2Q96D09 838 aa24.74■■□□□ 1.55
CDC42EP4-203ENST00000578516 FOXD4L1Q9NU39 408 aa24.74■■□□□ 1.55
CDC42EP4-203ENST00000578516 BTBD18B2RXH4 712 aa24.73■■□□□ 1.55
CDC42EP4-203ENST00000578516 TDP2O95551 362 aa24.73■■□□□ 1.55
CDC42EP4-203ENST00000578516 ZNF286BP0CG31 522 aa24.73■■□□□ 1.55
CDC42EP4-203ENST00000578516 XBP1P17861 261 aa24.73■■□□□ 1.55
CDC42EP4-203ENST00000578516 KRT2P35908 639 aa24.73■■□□□ 1.55
CDC42EP4-203ENST00000578516 ZNF76P36508 570 aa24.73■■□□□ 1.55
CDC42EP4-203ENST00000578516 TRIM60Q495X7 471 aa24.73■■□□□ 1.55
CDC42EP4-203ENST00000578516 MYSM1Q5VVJ2 828 aa24.73■■□□□ 1.55
CDC42EP4-203ENST00000578516 PIK3AP1Q6ZUJ8 805 aa24.73■■□□□ 1.55
CDC42EP4-203ENST00000578516 DIS3L2Q8IYB7 885 aaKnown RBP24.73■■□□□ 1.55
CDC42EP4-203ENST00000578516 FAM184AQ8NB25 1140 aa24.73■■□□□ 1.55
CDC42EP4-203ENST00000578516 C8orf76Q96K31 380 aa24.73■■□□□ 1.55
CDC42EP4-203ENST00000578516 TSEN34Q9BSV6 310 aaKnown RBP24.73■■□□□ 1.55
CDC42EP4-203ENST00000578516 WNT7AO00755 349 aa24.72■■□□□ 1.55
CDC42EP4-203ENST00000578516 CYP3A4P08684 503 aa24.72■■□□□ 1.55
CDC42EP4-203ENST00000578516 GJB2P29033 226 aa24.72■■□□□ 1.55
CDC42EP4-203ENST00000578516 RTP1P59025 263 aa24.72■■□□□ 1.55
CDC42EP4-203ENST00000578516 HMGN5P82970 282 aaKnown RBP24.72■■□□□ 1.55
CDC42EP4-203ENST00000578516 CEP55Q53EZ4 464 aa24.72■■□□□ 1.55
CDC42EP4-203ENST00000578516 SLC39A5Q6ZMH5 540 aa24.72■■□□□ 1.55
CDC42EP4-203ENST00000578516 PLA2G4DQ86XP0 818 aa24.72■■□□□ 1.55
CDC42EP4-203ENST00000578516 TEX2Q8IWB9 1127 aa24.72■■□□□ 1.55
CDC42EP4-203ENST00000578516 C7orf61Q8IZ16 206 aa24.72■■□□□ 1.55
CDC42EP4-203ENST00000578516 GJA10Q969M2 543 aa24.72■■□□□ 1.55
CDC42EP4-203ENST00000578516 SPATA33Q96N06 139 aa24.72■■□□□ 1.55
CDC42EP4-203ENST00000578516 STARD7Q9NQZ5 370 aa24.72■■□□□ 1.55
CDC42EP4-203ENST00000578516 KCNH7Q9NS40 1196 aa24.72■■□□□ 1.55
CDC42EP4-203ENST00000578516 TRIP12Q14669 1992 aaPredicted RBP24.71■■□□□ 1.55
CDC42EP4-203ENST00000578516 GRIN2DO15399 1336 aa24.71■■□□□ 1.55
CDC42EP4-203ENST00000578516 MOXD2PA6NHM9 499 aa24.71■■□□□ 1.55
CDC42EP4-203ENST00000578516 A6NJR5 290 aa24.71■■□□□ 1.55
CDC42EP4-203ENST00000578516 DDX39AO00148 427 aaKnown RBP24.71■■□□□ 1.55
CDC42EP4-203ENST00000578516 CHMP4BP1P59074 171 aa24.71■■□□□ 1.55
CDC42EP4-203ENST00000578516 PURAQ00577 322 aaKnown RBP24.71■■□□□ 1.55
CDC42EP4-203ENST00000578516 ITGB3BPQ13352 177 aaPredicted RBP24.71■■□□□ 1.55
CDC42EP4-203ENST00000578516 NONOQ15233 471 aaKnown RBP eCLIP24.71■■□□□ 1.55
CDC42EP4-203ENST00000578516 PRR16Q569H4 304 aa24.71■■□□□ 1.55
CDC42EP4-203ENST00000578516 GALNT17Q6IS24 598 aa24.71■■□□□ 1.55
CDC42EP4-203ENST00000578516 KRT25Q7Z3Z0 450 aa24.71■■□□□ 1.55
CDC42EP4-203ENST00000578516 PCSK9Q8NBP7 692 aaKnown RBP24.71■■□□□ 1.55
CDC42EP4-203ENST00000578516 DPF3Q92784 378 aa24.71■■□□□ 1.55
CDC42EP4-203ENST00000578516 LENG9Q96B70 501 aa24.71■■□□□ 1.55
CDC42EP4-203ENST00000578516 AGO4Q9HCK5 861 aaKnown RBP24.71■■□□□ 1.55
CDC42EP4-203ENST00000578516 ATP11BQ9Y2G3 1177 aa24.71■■□□□ 1.55
CDC42EP4-203ENST00000578516 CCDC194A0A1B0GVG4 234 aa24.7■■□□□ 1.54
CDC42EP4-203ENST00000578516 KIF28PB7ZC32 967 aa24.7■■□□□ 1.54
CDC42EP4-203ENST00000578516 RBAK-RBAKDNI3L0D1 243 aa24.7■■□□□ 1.54
CDC42EP4-203ENST00000578516 MEIS1O00470 390 aa24.7■■□□□ 1.54
CDC42EP4-203ENST00000578516 CAPN2P17655 700 aa24.7■■□□□ 1.54
CDC42EP4-203ENST00000578516 CPT1AP50416 773 aa24.7■■□□□ 1.54
CDC42EP4-203ENST00000578516 CUL4AQ13619 759 aa24.7■■□□□ 1.54
CDC42EP4-203ENST00000578516 TRIM29Q14134 588 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms