RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 TRIM32Q13049 653 aa9.68□□□□□ -0.86
PRPF8-213ENST00000576407 ORC2Q13416 577 aaPredicted RBP9.68□□□□□ -0.86
PRPF8-213ENST00000576407 ACVR2BQ13705 512 aa9.68□□□□□ -0.86
PRPF8-213ENST00000576407 GNPTABQ3T906 1256 aa9.68□□□□□ -0.86
PRPF8-213ENST00000576407 PRAMEF19Q5SWL8 479 aa9.68□□□□□ -0.86
PRPF8-213ENST00000576407 TAPT1Q6NXT6 567 aa9.68□□□□□ -0.86
PRPF8-213ENST00000576407 NLRX1Q86UT6 975 aa9.68□□□□□ -0.86
PRPF8-213ENST00000576407 POTEDQ86YR6 584 aa9.68□□□□□ -0.86
PRPF8-213ENST00000576407 SLAIN1Q8ND83 568 aa9.68□□□□□ -0.86
PRPF8-213ENST00000576407 GPRASP2Q96D09 838 aa9.68□□□□□ -0.86
PRPF8-213ENST00000576407 CHAMP1Q96JM3 812 aa9.68□□□□□ -0.86
PRPF8-213ENST00000576407 ZNF396Q96N95 335 aaPredicted RBP9.68□□□□□ -0.86
PRPF8-213ENST00000576407 USP28Q96RU2 1077 aa9.68□□□□□ -0.86
PRPF8-213ENST00000576407 PDGFCQ9NRA1 345 aa9.68□□□□□ -0.86
PRPF8-213ENST00000576407 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.68□□□□□ -0.86
PRPF8-213ENST00000576407 TFIP11Q9UBB9 837 aaKnown RBP9.68□□□□□ -0.86
PRPF8-213ENST00000576407 ZHX1Q9UKY1 873 aaPredicted RBP9.68□□□□□ -0.86
PRPF8-213ENST00000576407 CLIC4Q9Y696 253 aa9.68□□□□□ -0.86
PRPF8-213ENST00000576407 HTTP42858 3142 aa9.68□□□□□ -0.86
PRPF8-213ENST00000576407 KIAA1217Q5T5P2 1943 aa9.68□□□□□ -0.86
PRPF8-213ENST00000576407 RBM47A0AV96 593 aaKnown RBP9.67□□□□□ -0.86
PRPF8-213ENST00000576407 MSH4O15457 936 aa9.67□□□□□ -0.86
PRPF8-213ENST00000576407 MAFGO15525 162 aa9.67□□□□□ -0.86
PRPF8-213ENST00000576407 FIBPO43427 364 aa9.67□□□□□ -0.86
PRPF8-213ENST00000576407 ZNF865P0CJ78 1059 aaPredicted RBP9.67□□□□□ -0.86
PRPF8-213ENST00000576407 CYBAP13498 195 aa9.67□□□□□ -0.86
PRPF8-213ENST00000576407 PRKAR2AP13861 404 aaKnown RBP9.67□□□□□ -0.86
PRPF8-213ENST00000576407 ICAM3P32942 547 aa9.67□□□□□ -0.86
PRPF8-213ENST00000576407 ADCYAP1R1P41586 468 aa9.67□□□□□ -0.86
PRPF8-213ENST00000576407 CACNB2Q08289 660 aaPredicted RBP9.67□□□□□ -0.86
PRPF8-213ENST00000576407 PTGDRQ13258 359 aa9.67□□□□□ -0.86
PRPF8-213ENST00000576407 SEMA3FQ13275 785 aa9.67□□□□□ -0.86
PRPF8-213ENST00000576407 SF3A1Q15459 793 aaKnown RBP9.67□□□□□ -0.86
PRPF8-213ENST00000576407 CCDC144BQ3MJ40 725 aa9.67□□□□□ -0.86
PRPF8-213ENST00000576407 ANO1Q5XXA6 986 aa9.67□□□□□ -0.86
PRPF8-213ENST00000576407 ATL3Q6DD88 541 aa9.67□□□□□ -0.86
PRPF8-213ENST00000576407 KCNV1Q6PIU1 500 aa9.67□□□□□ -0.86
PRPF8-213ENST00000576407 C4orf32Q8N8J7 132 aa9.67□□□□□ -0.86
PRPF8-213ENST00000576407 TRPV1Q8NER1 839 aa9.67□□□□□ -0.86
PRPF8-213ENST00000576407 ETNPPLQ8TBG4 499 aa9.67□□□□□ -0.86
PRPF8-213ENST00000576407 SCFD2Q8WU76 684 aa9.67□□□□□ -0.86
PRPF8-213ENST00000576407 TNPO1Q92973 898 aaKnown RBP9.67□□□□□ -0.86
PRPF8-213ENST00000576407 CDHR1Q96JP9 859 aa9.67□□□□□ -0.86
PRPF8-213ENST00000576407 UIMC1Q96RL1 719 aa9.67□□□□□ -0.86
PRPF8-213ENST00000576407 TMEM60Q9H2L4 133 aa9.67□□□□□ -0.86
PRPF8-213ENST00000576407 KCNMB3Q9NPA1 279 aa9.67□□□□□ -0.86
PRPF8-213ENST00000576407 PRDM10Q9NQV6 1147 aa9.67□□□□□ -0.86
PRPF8-213ENST00000576407 POLR3EQ9NVU0 708 aa9.67□□□□□ -0.86
PRPF8-213ENST00000576407 PKD2L1Q9P0L9 805 aa9.67□□□□□ -0.86
PRPF8-213ENST00000576407 NRBP1Q9UHY1 535 aa9.67□□□□□ -0.86
PRPF8-213ENST00000576407 MRVI1Q9Y6F6 885 aa9.67□□□□□ -0.86
PRPF8-213ENST00000576407 IPO5O00410 1097 aaKnown RBP9.66□□□□□ -0.86
PRPF8-213ENST00000576407 TBX3O15119 743 aa9.66□□□□□ -0.86
PRPF8-213ENST00000576407 ATP9AO75110 1047 aa9.66□□□□□ -0.86
PRPF8-213ENST00000576407 ARIH2O95376 493 aa9.66□□□□□ -0.86
PRPF8-213ENST00000576407 INHAP05111 366 aa9.66□□□□□ -0.86
PRPF8-213ENST00000576407 OR52Z1P0C646 297 aa9.66□□□□□ -0.86
PRPF8-213ENST00000576407 TXNP10599 105 aaKnown RBP9.66□□□□□ -0.86
PRPF8-213ENST00000576407 TGFB3P10600 412 aa9.66□□□□□ -0.86
PRPF8-213ENST00000576407 NCLP19338 710 aaKnown RBP9.66□□□□□ -0.86
PRPF8-213ENST00000576407 NASPP49321 788 aaPredicted RBP9.66□□□□□ -0.86
PRPF8-213ENST00000576407 KRT85P78386 507 aa9.66□□□□□ -0.86
PRPF8-213ENST00000576407 SP2Q02086 613 aa9.66□□□□□ -0.86
PRPF8-213ENST00000576407 TTLL4Q14679 1199 aa9.66□□□□□ -0.86
PRPF8-213ENST00000576407 PTPAQ15257 358 aa9.66□□□□□ -0.86
PRPF8-213ENST00000576407 PKN2Q16513 984 aaKnown RBP9.66□□□□□ -0.86
PRPF8-213ENST00000576407 CALCRLQ16602 461 aa9.66□□□□□ -0.86
PRPF8-213ENST00000576407 LY6KQ17RY6 165 aa9.66□□□□□ -0.86
PRPF8-213ENST00000576407 TMEM63BQ5T3F8 832 aa9.66□□□□□ -0.86
PRPF8-213ENST00000576407 MAP3K21Q5TCX8 1036 aa9.66□□□□□ -0.86
PRPF8-213ENST00000576407 CCDC62Q6P9F0 684 aa9.66□□□□□ -0.86
PRPF8-213ENST00000576407 FBXO46Q6PJ61 603 aaPredicted RBP9.66□□□□□ -0.86
PRPF8-213ENST00000576407 SH3TC2Q8TF17 1288 aa9.66□□□□□ -0.86
PRPF8-213ENST00000576407 HAS1Q92839 578 aa9.66□□□□□ -0.86
PRPF8-213ENST00000576407 SLC5A5Q92911 643 aa9.66□□□□□ -0.86
PRPF8-213ENST00000576407 GJA10Q969M2 543 aa9.66□□□□□ -0.86
PRPF8-213ENST00000576407 MTMR9Q96QG7 549 aa9.66□□□□□ -0.86
PRPF8-213ENST00000576407 ZNF577Q9BSK1 485 aa9.66□□□□□ -0.86
PRPF8-213ENST00000576407 AGO4Q9HCK5 861 aaKnown RBP9.66□□□□□ -0.86
PRPF8-213ENST00000576407 DDX41Q9UJV9 622 aaKnown RBP9.66□□□□□ -0.86
PRPF8-213ENST00000576407 CFAP45Q9UL16 551 aa9.66□□□□□ -0.86
PRPF8-213ENST00000576407 CEP131Q9UPN4 1083 aa9.66□□□□□ -0.86
PRPF8-213ENST00000576407 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.65□□□□□ -0.86
PRPF8-213ENST00000576407 LAD1O00515 517 aa9.65□□□□□ -0.86
PRPF8-213ENST00000576407 DHX15O43143 795 aaKnown RBP9.65□□□□□ -0.86
PRPF8-213ENST00000576407 ADCY6O43306 1168 aa9.65□□□□□ -0.86
PRPF8-213ENST00000576407 MARCH6O60337 910 aa9.65□□□□□ -0.86
PRPF8-213ENST00000576407 BAG4O95429 457 aaKnown RBP9.65□□□□□ -0.86
PRPF8-213ENST00000576407 YEATS4O95619 227 aa9.65□□□□□ -0.86
PRPF8-213ENST00000576407 BMP15O95972 392 aa9.65□□□□□ -0.86
PRPF8-213ENST00000576407 KCNA2P16389 499 aa9.65□□□□□ -0.86
PRPF8-213ENST00000576407 SMPD1P17405 629 aa9.65□□□□□ -0.86
PRPF8-213ENST00000576407 UBA1P22314 1058 aaKnown RBP9.65□□□□□ -0.86
PRPF8-213ENST00000576407 CNGA1P29973 690 aa9.65□□□□□ -0.86
PRPF8-213ENST00000576407 CCND3P30281 292 aaPredicted RBP9.65□□□□□ -0.86
PRPF8-213ENST00000576407 TXKP42681 527 aa9.65□□□□□ -0.86
PRPF8-213ENST00000576407 ATP2C1P98194 919 aaPredicted RBP9.65□□□□□ -0.86
PRPF8-213ENST00000576407 TNFAIP2Q03169 654 aa9.65□□□□□ -0.86
PRPF8-213ENST00000576407 ITGB3BPQ13352 177 aaPredicted RBP9.65□□□□□ -0.86
PRPF8-213ENST00000576407 MAPK8IP2Q13387 824 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms