RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 ALG1Q9BT22 464 aa12.13□□□□□ -0.47
TVP23B-208ENST00000575261 PCDHA1Q9Y5I3 950 aa12.13□□□□□ -0.47
TVP23B-208ENST00000575261 MYH7BA7E2Y1 1941 aa12.13□□□□□ -0.47
TVP23B-208ENST00000575261 PALM3A6NDB9 673 aaPredicted RBP12.12□□□□□ -0.47
TVP23B-208ENST00000575261 HAS3O00219 553 aa12.12□□□□□ -0.47
TVP23B-208ENST00000575261 ARHGEF15O94989 841 aa12.12□□□□□ -0.47
TVP23B-208ENST00000575261 CCND2P30279 289 aa12.12□□□□□ -0.47
TVP23B-208ENST00000575261 HOXA13P31271 388 aaPredicted RBP12.12□□□□□ -0.47
TVP23B-208ENST00000575261 TFF2Q03403 129 aa12.12□□□□□ -0.47
TVP23B-208ENST00000575261 GPNMBQ14956 572 aa12.12□□□□□ -0.47
TVP23B-208ENST00000575261 PGM5Q15124 567 aa12.12□□□□□ -0.47
TVP23B-208ENST00000575261 MYSM1Q5VVJ2 828 aa12.12□□□□□ -0.47
TVP23B-208ENST00000575261 CYB5R4Q7L1T6 521 aa12.12□□□□□ -0.47
TVP23B-208ENST00000575261 YTHDC1Q96MU7 727 aaKnown RBP12.12□□□□□ -0.47
TVP23B-208ENST00000575261 SPATA33Q96N06 139 aa12.12□□□□□ -0.47
TVP23B-208ENST00000575261 ZBED2Q9BTP6 218 aa12.12□□□□□ -0.47
TVP23B-208ENST00000575261 U3KPZ7 1027 aaPredicted RBP12.12□□□□□ -0.47
TVP23B-208ENST00000575261 ABHD14A-ACY1A0A1B0GW23 586 aa12.11□□□□□ -0.47
TVP23B-208ENST00000575261 ERICH2A1L162 156 aa12.11□□□□□ -0.47
TVP23B-208ENST00000575261 GCOM1H8Y6P7 765 aaPredicted RBP12.11□□□□□ -0.47
TVP23B-208ENST00000575261 NBNO60934 754 aa12.11□□□□□ -0.47
TVP23B-208ENST00000575261 PPFIA4O75335 1185 aa12.11□□□□□ -0.47
TVP23B-208ENST00000575261 RGS20O76081 388 aa12.11□□□□□ -0.47
TVP23B-208ENST00000575261 GGPS1O95749 300 aa12.11□□□□□ -0.47
TVP23B-208ENST00000575261 POLR2MP0CAP2 368 aa12.11□□□□□ -0.47
TVP23B-208ENST00000575261 TGFB3P10600 412 aa12.11□□□□□ -0.47
TVP23B-208ENST00000575261 GSPT1P15170 499 aaKnown RBP12.11□□□□□ -0.47
TVP23B-208ENST00000575261 UBA1P22314 1058 aaKnown RBP12.11□□□□□ -0.47
TVP23B-208ENST00000575261 DEFB103AP81534 67 aa12.11□□□□□ -0.47
TVP23B-208ENST00000575261 GRM4Q14833 912 aa12.11□□□□□ -0.47
TVP23B-208ENST00000575261 SART3Q15020 963 aaKnown RBP12.11□□□□□ -0.47
TVP23B-208ENST00000575261 HSDL1Q3SXM5 330 aa12.11□□□□□ -0.47
TVP23B-208ENST00000575261 CELF3Q5SZQ8 465 aaKnown RBP12.11□□□□□ -0.47
TVP23B-208ENST00000575261 TTC22Q5TAA0 569 aa12.11□□□□□ -0.47
TVP23B-208ENST00000575261 RALYLQ86SE5 291 aaKnown RBP12.11□□□□□ -0.47
TVP23B-208ENST00000575261 VSIG10LQ86VR7 867 aa12.11□□□□□ -0.47
TVP23B-208ENST00000575261 IL31RAQ8NI17 732 aa12.11□□□□□ -0.47
TVP23B-208ENST00000575261 RUFY2Q8WXA3 655 aa12.11□□□□□ -0.47
TVP23B-208ENST00000575261 RIOX1Q9H6W3 641 aa12.11□□□□□ -0.47
TVP23B-208ENST00000575261 COG5Q9UP83 839 aa12.11□□□□□ -0.47
TVP23B-208ENST00000575261 EMSYQ7Z589 1322 aa12.11□□□□□ -0.47
TVP23B-208ENST00000575261 SIP14410 1827 aa12.1□□□□□ -0.47
TVP23B-208ENST00000575261 LCHNA4D1U4 455 aa12.1□□□□□ -0.47
TVP23B-208ENST00000575261 IFIT3O14879 490 aaKnown RBP12.1□□□□□ -0.47
TVP23B-208ENST00000575261 SORBS3O60504 671 aa12.1□□□□□ -0.47
TVP23B-208ENST00000575261 GJB5O95377 273 aa12.1□□□□□ -0.47
TVP23B-208ENST00000575261 CYP21A2P08686 494 aa12.1□□□□□ -0.47
TVP23B-208ENST00000575261 BMP1P13497 986 aa12.1□□□□□ -0.47
TVP23B-208ENST00000575261 KCNQ1P51787 676 aa12.1□□□□□ -0.47
TVP23B-208ENST00000575261 GRB10Q13322 594 aa12.1□□□□□ -0.47
TVP23B-208ENST00000575261 IKBKEQ14164 716 aa12.1□□□□□ -0.47
TVP23B-208ENST00000575261 TRIM71Q2Q1W2 868 aaKnown RBP12.1□□□□□ -0.47
TVP23B-208ENST00000575261 GNPTABQ3T906 1256 aa12.1□□□□□ -0.47
TVP23B-208ENST00000575261 KRT40Q6A162 431 aa12.1□□□□□ -0.47
TVP23B-208ENST00000575261 TMCO2Q7Z6W1 182 aaPredicted RBP12.1□□□□□ -0.47
TVP23B-208ENST00000575261 WNT8BQ93098 351 aa12.1□□□□□ -0.47
TVP23B-208ENST00000575261 PIGSQ96S52 555 aa12.1□□□□□ -0.47
TVP23B-208ENST00000575261 MLXIPQ9HAP2 919 aa12.1□□□□□ -0.47
TVP23B-208ENST00000575261 TCF20Q9UGU0 1960 aaKnown RBP12.1□□□□□ -0.47
TVP23B-208ENST00000575261 FRMPD4Q14CM0 1322 aa12.1□□□□□ -0.47
TVP23B-208ENST00000575261 MICAL3Q7RTP6 2002 aa12.1□□□□□ -0.47
TVP23B-208ENST00000575261 PNMA6FA0A0J9YX94 578 aa12.09□□□□□ -0.47
TVP23B-208ENST00000575261 LPXNO60711 386 aa12.09□□□□□ -0.47
TVP23B-208ENST00000575261 LGR5O75473 907 aa12.09□□□□□ -0.47
TVP23B-208ENST00000575261 COL9A1P20849 921 aa12.09□□□□□ -0.47
TVP23B-208ENST00000575261 SP2Q02086 613 aa12.09□□□□□ -0.47
TVP23B-208ENST00000575261 MBTPS1Q14703 1052 aa12.09□□□□□ -0.47
TVP23B-208ENST00000575261 WTAPQ15007 396 aa12.09□□□□□ -0.47
TVP23B-208ENST00000575261 SLC35G1Q2M3R5 365 aa12.09□□□□□ -0.47
TVP23B-208ENST00000575261 ZNF618Q5T7W0 954 aa12.09□□□□□ -0.47
TVP23B-208ENST00000575261 TRAF7Q6Q0C0 670 aa12.09□□□□□ -0.47
TVP23B-208ENST00000575261 SPRED2Q7Z698 418 aa12.09□□□□□ -0.47
TVP23B-208ENST00000575261 SERINC5Q86VE9 423 aa12.09□□□□□ -0.47
TVP23B-208ENST00000575261 FCHSD1Q86WN1 690 aa12.09□□□□□ -0.47
TVP23B-208ENST00000575261 NCOA7Q8NI08 942 aa12.09□□□□□ -0.47
TVP23B-208ENST00000575261 GDPD5Q8WTR4 605 aa12.09□□□□□ -0.47
TVP23B-208ENST00000575261 HLA-CQ95604 372 aa12.09□□□□□ -0.47
TVP23B-208ENST00000575261 NECAB3Q96P71 396 aaPredicted RBP12.09□□□□□ -0.47
TVP23B-208ENST00000575261 RAD9AQ99638 391 aa12.09□□□□□ -0.47
TVP23B-208ENST00000575261 C16orf70Q9BSU1 422 aa12.09□□□□□ -0.47
TVP23B-208ENST00000575261 BAZ2BQ9UIF8 2168 aaKnown RBP12.09□□□□□ -0.47
TVP23B-208ENST00000575261 C17orf102A2RUQ5 167 aa12.08□□□□□ -0.48
TVP23B-208ENST00000575261 H3BRB1 525 aa12.08□□□□□ -0.48
TVP23B-208ENST00000575261 NOP56O00567 594 aaKnown RBP12.08□□□□□ -0.48
TVP23B-208ENST00000575261 CYTH3O43739 400 aa12.08□□□□□ -0.48
TVP23B-208ENST00000575261 STAM2O75886 525 aa12.08□□□□□ -0.48
TVP23B-208ENST00000575261 PDE4AP27815 886 aa12.08□□□□□ -0.48
TVP23B-208ENST00000575261 THPOP40225 353 aa12.08□□□□□ -0.48
TVP23B-208ENST00000575261 ZNF200P98182 395 aaPredicted RBP12.08□□□□□ -0.48
TVP23B-208ENST00000575261 TROAPQ12815 778 aa12.08□□□□□ -0.48
TVP23B-208ENST00000575261 TCTN1Q2MV58 587 aa12.08□□□□□ -0.48
TVP23B-208ENST00000575261 CATIPQ7Z7H3 387 aa12.08□□□□□ -0.48
TVP23B-208ENST00000575261 ATP6V0A1Q93050 837 aa12.08□□□□□ -0.48
TVP23B-208ENST00000575261 TGS1Q96RS0 853 aaKnown RBP12.08□□□□□ -0.48
TVP23B-208ENST00000575261 TUT1Q9H6E5 874 aaKnown RBP12.08□□□□□ -0.48
TVP23B-208ENST00000575261 LMCD1Q9NZU5 365 aa12.08□□□□□ -0.48
TVP23B-208ENST00000575261 MTUS1Q9ULD2 1270 aa12.08□□□□□ -0.48
TVP23B-208ENST00000575261 LINC01553A4QN01 128 aa12.07□□□□□ -0.48
TVP23B-208ENST00000575261 RSPH10B2B2RC85 870 aa12.07□□□□□ -0.48
TVP23B-208ENST00000575261 E7EWF7 191 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms