RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 KATNAL1Q9BW62 490 aa14.62□□□□□ -0.07
NPLOC4-213ENST00000573519 MTIF3Q9H2K0 278 aaKnown RBP14.62□□□□□ -0.07
NPLOC4-213ENST00000573519 PSTPIP2Q9H939 334 aa14.62□□□□□ -0.07
NPLOC4-213ENST00000573519 ZBBXA8MT70 800 aa14.61□□□□□ -0.07
NPLOC4-213ENST00000573519 PIK3CDO00329 1044 aa14.61□□□□□ -0.07
NPLOC4-213ENST00000573519 MEIS2O14770 477 aa14.61□□□□□ -0.07
NPLOC4-213ENST00000573519 STAM2O75886 525 aa14.61□□□□□ -0.07
NPLOC4-213ENST00000573519 TGFB3P10600 412 aa14.61□□□□□ -0.07
NPLOC4-213ENST00000573519 MRPS9P82933 396 aaKnown RBP14.61□□□□□ -0.07
NPLOC4-213ENST00000573519 MFSD10Q14728 455 aa14.61□□□□□ -0.07
NPLOC4-213ENST00000573519 UBE2SQ16763 222 aa14.61□□□□□ -0.07
NPLOC4-213ENST00000573519 KIAA0753Q2KHM9 967 aa14.61□□□□□ -0.07
NPLOC4-213ENST00000573519 HSDL1Q3SXM5 330 aa14.61□□□□□ -0.07
NPLOC4-213ENST00000573519 GUCD1Q96NT3 240 aa14.61□□□□□ -0.07
NPLOC4-213ENST00000573519 SEMA6BQ9H3T3 888 aa14.61□□□□□ -0.07
NPLOC4-213ENST00000573519 STXBP5LQ9Y2K9 1186 aa14.61□□□□□ -0.07
NPLOC4-213ENST00000573519 FRMPD4Q14CM0 1322 aa14.61□□□□□ -0.07
NPLOC4-213ENST00000573519 BAZ2BQ9UIF8 2168 aaKnown RBP14.6□□□□□ -0.07
NPLOC4-213ENST00000573519 SPDYE3A6NKU9 549 aa14.6□□□□□ -0.07
NPLOC4-213ENST00000573519 GRXCR1A8MXD5 290 aa14.6□□□□□ -0.07
NPLOC4-213ENST00000573519 NOP56O00567 594 aaKnown RBP14.6□□□□□ -0.07
NPLOC4-213ENST00000573519 REC8O95072 547 aa14.6□□□□□ -0.07
NPLOC4-213ENST00000573519 DNAJB2P25686 324 aa14.6□□□□□ -0.07
NPLOC4-213ENST00000573519 HSPA4P34932 840 aa14.6□□□□□ -0.07
NPLOC4-213ENST00000573519 BFSP2Q13515 415 aa14.6□□□□□ -0.07
NPLOC4-213ENST00000573519 PCNX4Q63HM2 1172 aa14.6□□□□□ -0.07
NPLOC4-213ENST00000573519 GDF6Q6KF10 455 aaPredicted RBP14.6□□□□□ -0.07
NPLOC4-213ENST00000573519 Q6ZUG5 572 aa14.6□□□□□ -0.07
NPLOC4-213ENST00000573519 CCDC155Q8N6L0 562 aa14.6□□□□□ -0.07
NPLOC4-213ENST00000573519 HERVK_113Q902F9 699 aa14.6□□□□□ -0.07
NPLOC4-213ENST00000573519 INPP4AQ96PE3 977 aaPredicted RBP14.6□□□□□ -0.07
NPLOC4-213ENST00000573519 TTYH1Q9H313 450 aaPredicted RBP14.6□□□□□ -0.07
NPLOC4-213ENST00000573519 CXXC1Q9P0U4 656 aaPredicted RBP14.6□□□□□ -0.07
NPLOC4-213ENST00000573519 HDAC6Q9UBN7 1215 aa14.6□□□□□ -0.07
NPLOC4-213ENST00000573519 SNX14Q9Y5W7 946 aa14.6□□□□□ -0.07
NPLOC4-213ENST00000573519 CNTNAP5Q8WYK1 1306 aa14.6□□□□□ -0.07
NPLOC4-213ENST00000573519 FIBPO43427 364 aa14.59□□□□□ -0.07
NPLOC4-213ENST00000573519 PPFIA4O75335 1185 aa14.59□□□□□ -0.07
NPLOC4-213ENST00000573519 F2P00734 622 aa14.59□□□□□ -0.07
NPLOC4-213ENST00000573519 NAPAP54920 295 aa14.59□□□□□ -0.07
NPLOC4-213ENST00000573519 SP4Q02446 784 aa14.59□□□□□ -0.07
NPLOC4-213ENST00000573519 APOBRQ0VD83 1088 aa14.59□□□□□ -0.07
NPLOC4-213ENST00000573519 NEDD9Q14511 834 aa14.59□□□□□ -0.07
NPLOC4-213ENST00000573519 RASIP1Q5U651 963 aa14.59□□□□□ -0.07
NPLOC4-213ENST00000573519 WWC2Q6AWC2 1192 aa14.59□□□□□ -0.07
NPLOC4-213ENST00000573519 BLOC1S2Q6QNY1 142 aa14.59□□□□□ -0.07
NPLOC4-213ENST00000573519 CYFIP1Q7L576 1253 aa14.59□□□□□ -0.07
NPLOC4-213ENST00000573519 NLRX1Q86UT6 975 aa14.59□□□□□ -0.07
NPLOC4-213ENST00000573519 TIFAQ96CG3 184 aa14.59□□□□□ -0.07
NPLOC4-213ENST00000573519 CDX2Q99626 313 aaPredicted RBP14.59□□□□□ -0.07
NPLOC4-213ENST00000573519 FTOQ9C0B1 505 aaKnown RBP eCLIP14.59□□□□□ -0.07
NPLOC4-213ENST00000573519 BCAS3Q9H6U6 928 aa14.59□□□□□ -0.07
NPLOC4-213ENST00000573519 GTF2IRD1Q9UHL9 959 aa14.59□□□□□ -0.07
NPLOC4-213ENST00000573519 V9GY48 417 aaPredicted RBP14.59□□□□□ -0.07
NPLOC4-213ENST00000573519 SCN10AQ9Y5Y9 1956 aa14.59□□□□□ -0.07
NPLOC4-213ENST00000573519 SPATA31C2B4DYI2 1134 aa14.58□□□□□ -0.08
NPLOC4-213ENST00000573519 PITPNM1O00562 1244 aa14.58□□□□□ -0.08
NPLOC4-213ENST00000573519 IQCF3P0C7M6 154 aa14.58□□□□□ -0.08
NPLOC4-213ENST00000573519 CDC27P30260 824 aa14.58□□□□□ -0.08
NPLOC4-213ENST00000573519 ICAM3P32942 547 aa14.58□□□□□ -0.08
NPLOC4-213ENST00000573519 PBX2P40425 430 aa14.58□□□□□ -0.08
NPLOC4-213ENST00000573519 METAP2P50579 478 aaKnown RBP eCLIP14.58□□□□□ -0.08
NPLOC4-213ENST00000573519 XRRA1Q6P2D8 792 aa14.58□□□□□ -0.08
NPLOC4-213ENST00000573519 SESTD1Q86VW0 696 aa14.58□□□□□ -0.08
NPLOC4-213ENST00000573519 SLC17A8Q8NDX2 589 aa14.58□□□□□ -0.08
NPLOC4-213ENST00000573519 BRF1Q92994 677 aa14.58□□□□□ -0.08
NPLOC4-213ENST00000573519 PBX4Q9BYU1 374 aa14.58□□□□□ -0.08
NPLOC4-213ENST00000573519 EHMT1Q9H9B1 1298 aa14.58□□□□□ -0.08
NPLOC4-213ENST00000573519 PCDHA6Q9UN73 950 aa14.58□□□□□ -0.08
NPLOC4-213ENST00000573519 PCDHA8Q9Y5H6 950 aa14.58□□□□□ -0.08
NPLOC4-213ENST00000573519 SLC4A7Q9Y6M7 1214 aa14.58□□□□□ -0.08
NPLOC4-213ENST00000573519 TMEM265A0A087WTH1 108 aa14.57□□□□□ -0.08
NPLOC4-213ENST00000573519 HAS3O00219 553 aa14.57□□□□□ -0.08
NPLOC4-213ENST00000573519 LGALS2P05162 132 aa14.57□□□□□ -0.08
NPLOC4-213ENST00000573519 PFKMP08237 780 aa14.57□□□□□ -0.08
NPLOC4-213ENST00000573519 ACTN1P12814 892 aa14.57□□□□□ -0.08
NPLOC4-213ENST00000573519 RFC2P35250 354 aa14.57□□□□□ -0.08
NPLOC4-213ENST00000573519 SEMA3FQ13275 785 aa14.57□□□□□ -0.08
NPLOC4-213ENST00000573519 METTL7BQ6UX53 244 aa14.57□□□□□ -0.08
NPLOC4-213ENST00000573519 CAGE1Q8TC20 777 aa14.57□□□□□ -0.08
NPLOC4-213ENST00000573519 MYLIPQ8WY64 445 aa14.57□□□□□ -0.08
NPLOC4-213ENST00000573519 KCNB2Q92953 911 aa14.57□□□□□ -0.08
NPLOC4-213ENST00000573519 PKD2L1Q9P0L9 805 aa14.57□□□□□ -0.08
NPLOC4-213ENST00000573519 MSRAQ9UJ68 235 aa14.57□□□□□ -0.08
NPLOC4-213ENST00000573519 H3BRB1 525 aa14.56□□□□□ -0.08
NPLOC4-213ENST00000573519 HOXD8P13378 290 aaPredicted RBP14.56□□□□□ -0.08
NPLOC4-213ENST00000573519 FOSL2P15408 326 aa14.56□□□□□ -0.08
NPLOC4-213ENST00000573519 RPS6KB1P23443 525 aa14.56□□□□□ -0.08
NPLOC4-213ENST00000573519 PSMA5P28066 241 aa14.56□□□□□ -0.08
NPLOC4-213ENST00000573519 ADD1P35611 737 aaKnown RBP14.56□□□□□ -0.08
NPLOC4-213ENST00000573519 ADCY7P51828 1080 aa14.56□□□□□ -0.08
NPLOC4-213ENST00000573519 ZNF200P98182 395 aaPredicted RBP14.56□□□□□ -0.08
NPLOC4-213ENST00000573519 RAB30Q15771 203 aa14.56□□□□□ -0.08
NPLOC4-213ENST00000573519 UTP14CQ5TAP6 766 aaKnown RBP14.56□□□□□ -0.08
NPLOC4-213ENST00000573519 AFAP1L1Q8TED9 768 aa14.56□□□□□ -0.08
NPLOC4-213ENST00000573519 DHX38Q92620 1227 aaKnown RBP14.56□□□□□ -0.08
NPLOC4-213ENST00000573519 PGBD1Q96JS3 809 aa14.56□□□□□ -0.08
NPLOC4-213ENST00000573519 CTAGE1Q96RT6 745 aa14.56□□□□□ -0.08
NPLOC4-213ENST00000573519 C16orf70Q9BSU1 422 aa14.56□□□□□ -0.08
NPLOC4-213ENST00000573519 ZNF576Q9H609 170 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms