RNA–Protein interactions for RNA: ENST00000573095.1

HCFC1R1-204, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3

Gene HCFC1R1, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-204ENST00000573095 GGPS1O95749 300 aa22.37■■□□□ 1.17
HCFC1R1-204ENST00000573095 SELPP16109 830 aa22.37■■□□□ 1.17
HCFC1R1-204ENST00000573095 KIAA0753Q2KHM9 967 aa22.37■■□□□ 1.17
HCFC1R1-204ENST00000573095 LRRC8DQ7L1W4 858 aa22.37■■□□□ 1.17
HCFC1R1-204ENST00000573095 FCHSD1Q86WN1 690 aa22.37■■□□□ 1.17
HCFC1R1-204ENST00000573095 ZNF654Q8IZM8 581 aa22.37■■□□□ 1.17
HCFC1R1-204ENST00000573095 SPATA33Q96N06 139 aa22.37■■□□□ 1.17
HCFC1R1-204ENST00000573095 FTOQ9C0B1 505 aaKnown RBP eCLIP22.37■■□□□ 1.17
HCFC1R1-204ENST00000573095 PPFIA4O75335 1185 aa22.36■■□□□ 1.17
HCFC1R1-204ENST00000573095 KIF5BP33176 963 aa22.36■■□□□ 1.17
HCFC1R1-204ENST00000573095 HSDL1Q3SXM5 330 aa22.36■■□□□ 1.17
HCFC1R1-204ENST00000573095 CTCFLQ8NI51 663 aaPredicted RBP22.36■■□□□ 1.17
HCFC1R1-204ENST00000573095 SYMPKQ92797 1274 aaKnown RBP22.36■■□□□ 1.17
HCFC1R1-204ENST00000573095 ALG1Q9BT22 464 aa22.36■■□□□ 1.17
HCFC1R1-204ENST00000573095 DOCK5Q9H7D0 1870 aa22.36■■□□□ 1.17
HCFC1R1-204ENST00000573095 STAM2O75886 525 aa22.35■■□□□ 1.17
HCFC1R1-204ENST00000573095 CA3P07451 260 aa22.35■■□□□ 1.17
HCFC1R1-204ENST00000573095 CKBP12277 381 aa22.35■■□□□ 1.17
HCFC1R1-204ENST00000573095 SP2Q02086 613 aa22.35■■□□□ 1.17
HCFC1R1-204ENST00000573095 PTK7Q13308 1070 aa22.35■■□□□ 1.17
HCFC1R1-204ENST00000573095 GPNMBQ14956 572 aa22.35■■□□□ 1.17
HCFC1R1-204ENST00000573095 TJAP1Q5JTD0 557 aa22.35■■□□□ 1.17
HCFC1R1-204ENST00000573095 CASC1Q6TDU7 716 aa22.35■■□□□ 1.17
HCFC1R1-204ENST00000573095 LSG1Q9H089 658 aaKnown RBP22.35■■□□□ 1.17
HCFC1R1-204ENST00000573095 COL4A4P53420 1690 aaPredicted RBP22.34■■□□□ 1.17
HCFC1R1-204ENST00000573095 PRC1O43663 620 aa22.34■■□□□ 1.17
HCFC1R1-204ENST00000573095 CXCL10P02778 98 aa22.34■■□□□ 1.17
HCFC1R1-204ENST00000573095 IGFBP4P22692 258 aa22.34■■□□□ 1.17
HCFC1R1-204ENST00000573095 SMARCA1P28370 1054 aa22.34■■□□□ 1.17
HCFC1R1-204ENST00000573095 GNPTABQ3T906 1256 aa22.34■■□□□ 1.17
HCFC1R1-204ENST00000573095 HERC6Q8IVU3 1022 aa22.34■■□□□ 1.17
HCFC1R1-204ENST00000573095 GPKOWQ92917 476 aaPredicted RBP eCLIP22.34■■□□□ 1.17
HCFC1R1-204ENST00000573095 INPP4AQ96PE3 977 aaPredicted RBP22.34■■□□□ 1.17
HCFC1R1-204ENST00000573095 C16orf70Q9BSU1 422 aa22.34■■□□□ 1.17
HCFC1R1-204ENST00000573095 MYL10Q9BUA6 226 aa22.34■■□□□ 1.17
HCFC1R1-204ENST00000573095 PRDM6Q9NQX0 595 aa22.34■■□□□ 1.17
HCFC1R1-204ENST00000573095 SH2B2O14492 632 aaPredicted RBP22.33■■□□□ 1.17
HCFC1R1-204ENST00000573095 SORBS3O60504 671 aa22.33■■□□□ 1.17
HCFC1R1-204ENST00000573095 ICAM3P32942 547 aa22.33■■□□□ 1.17
HCFC1R1-204ENST00000573095 MCM5P33992 734 aa22.33■■□□□ 1.17
HCFC1R1-204ENST00000573095 MRPS9P82933 396 aaKnown RBP22.33■■□□□ 1.17
HCFC1R1-204ENST00000573095 TRIM71Q2Q1W2 868 aaKnown RBP22.33■■□□□ 1.17
HCFC1R1-204ENST00000573095 CNKSR3Q6P9H4 555 aa22.33■■□□□ 1.17
HCFC1R1-204ENST00000573095 PPM1EQ8WY54 764 aa22.33■■□□□ 1.17
HCFC1R1-204ENST00000573095 RRP36Q96EU6 259 aaKnown RBP22.33■■□□□ 1.17
HCFC1R1-204ENST00000573095 ZFP91Q96JP5 570 aaPredicted RBP22.33■■□□□ 1.17
HCFC1R1-204ENST00000573095 TMEM87BQ96K49 555 aa22.33■■□□□ 1.17
HCFC1R1-204ENST00000573095 LZTS2Q9BRK4 669 aa22.33■■□□□ 1.17
HCFC1R1-204ENST00000573095 MLXIPQ9HAP2 919 aa22.33■■□□□ 1.17
HCFC1R1-204ENST00000573095 THEGQ9P2T0 379 aa22.33■■□□□ 1.17
HCFC1R1-204ENST00000573095 PIK3CDO00329 1044 aa22.32■■□□□ 1.16
HCFC1R1-204ENST00000573095 NBNO60934 754 aa22.32■■□□□ 1.16
HCFC1R1-204ENST00000573095 KCNJ6P48051 423 aa22.32■■□□□ 1.16
HCFC1R1-204ENST00000573095 GNAQP50148 359 aa22.32■■□□□ 1.16
HCFC1R1-204ENST00000573095 WDR5P61964 334 aaKnown RBP22.32■■□□□ 1.16
HCFC1R1-204ENST00000573095 TRAF7Q6Q0C0 670 aa22.32■■□□□ 1.16
HCFC1R1-204ENST00000573095 PIBF1Q8WXW3 757 aa22.32■■□□□ 1.16
HCFC1R1-204ENST00000573095 WNT8BQ93098 351 aa22.32■■□□□ 1.16
HCFC1R1-204ENST00000573095 ESYT1Q9BSJ8 1104 aa22.32■■□□□ 1.16
HCFC1R1-204ENST00000573095 SEC63Q9UGP8 760 aaKnown RBP22.32■■□□□ 1.16
HCFC1R1-204ENST00000573095 SPTBN5Q9NRC6 3674 aaKnown RBP22.32■■□□□ 1.16
HCFC1R1-204ENST00000573095 KIF28PB7ZC32 967 aa22.31■■□□□ 1.16
HCFC1R1-204ENST00000573095 SLC27A2O14975 620 aa22.31■■□□□ 1.16
HCFC1R1-204ENST00000573095 FIBPO43427 364 aa22.31■■□□□ 1.16
HCFC1R1-204ENST00000573095 HOXC8P31273 242 aa22.31■■□□□ 1.16
HCFC1R1-204ENST00000573095 HIC1Q14526 733 aa22.31■■□□□ 1.16
HCFC1R1-204ENST00000573095 METTL7BQ6UX53 244 aa22.31■■□□□ 1.16
HCFC1R1-204ENST00000573095 TMTC2Q8N394 836 aa22.31■■□□□ 1.16
HCFC1R1-204ENST00000573095 ATXN2LQ8WWM7 1075 aaKnown RBP22.31■■□□□ 1.16
HCFC1R1-204ENST00000573095 MICAL3Q7RTP6 2002 aa22.3■■□□□ 1.16
HCFC1R1-204ENST00000573095 CCDC69A6NI79 296 aa22.3■■□□□ 1.16
HCFC1R1-204ENST00000573095 PLEKHA8P1O95397 391 aa22.3■■□□□ 1.16
HCFC1R1-204ENST00000573095 LGALS2P05162 132 aa22.3■■□□□ 1.16
HCFC1R1-204ENST00000573095 LIFRP42702 1097 aa22.3■■□□□ 1.16
HCFC1R1-204ENST00000573095 TAP1Q03518 808 aa22.3■■□□□ 1.16
HCFC1R1-204ENST00000573095 SEMA3FQ13275 785 aa22.3■■□□□ 1.16
HCFC1R1-204ENST00000573095 NEDD9Q14511 834 aa22.3■■□□□ 1.16
HCFC1R1-204ENST00000573095 CCDC85BQ15834 202 aaPredicted RBP22.3■■□□□ 1.16
HCFC1R1-204ENST00000573095 PCNX4Q63HM2 1172 aa22.3■■□□□ 1.16
HCFC1R1-204ENST00000573095 NFXL1Q6ZNB6 911 aa22.3■■□□□ 1.16
HCFC1R1-204ENST00000573095 SMARCC2Q8TAQ2 1214 aa22.3■■□□□ 1.16
HCFC1R1-204ENST00000573095 CUL5Q93034 780 aa22.3■■□□□ 1.16
HCFC1R1-204ENST00000573095 ABHD14A-ACY1A0A1B0GW23 586 aa22.29■■□□□ 1.16
HCFC1R1-204ENST00000573095 SPATA31C2B4DYI2 1134 aa22.29■■□□□ 1.16
HCFC1R1-204ENST00000573095 H3BRB1 525 aa22.29■■□□□ 1.16
HCFC1R1-204ENST00000573095 NOP56O00567 594 aaKnown RBP22.29■■□□□ 1.16
HCFC1R1-204ENST00000573095 MEIS2O14770 477 aa22.29■■□□□ 1.16
HCFC1R1-204ENST00000573095 ARHGEF15O94989 841 aa22.29■■□□□ 1.16
HCFC1R1-204ENST00000573095 CALM1P0DP23 149 aa22.29■■□□□ 1.16
HCFC1R1-204ENST00000573095 CALM2P0DP24 149 aa22.29■■□□□ 1.16
HCFC1R1-204ENST00000573095 CALM3P0DP25 149 aa22.29■■□□□ 1.16
HCFC1R1-204ENST00000573095 POU3F3P20264 500 aaPredicted RBP22.29■■□□□ 1.16
HCFC1R1-204ENST00000573095 ZNF200P98182 395 aaPredicted RBP22.29■■□□□ 1.16
HCFC1R1-204ENST00000573095 COL9A3Q14050 684 aaPredicted RBP22.29■■□□□ 1.16
HCFC1R1-204ENST00000573095 NECTIN1Q15223 517 aa22.29■■□□□ 1.16
HCFC1R1-204ENST00000573095 ZNF618Q5T7W0 954 aa22.29■■□□□ 1.16
HCFC1R1-204ENST00000573095 CREB3L3Q68CJ9 461 aa22.29■■□□□ 1.16
HCFC1R1-204ENST00000573095 XRRA1Q6P2D8 792 aa22.29■■□□□ 1.16
HCFC1R1-204ENST00000573095 USP17L6PQ6QN14 398 aa22.29■■□□□ 1.16
HCFC1R1-204ENST00000573095 SERINC5Q86VE9 423 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms