RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 ICAM3P32942 547 aa16.48■□□□□ 0.23
NPLOC4-209ENST00000572760 CIITAP33076 1130 aa16.48■□□□□ 0.23
NPLOC4-209ENST00000572760 SETQ01105 290 aaPredicted RBP16.48■□□□□ 0.23
NPLOC4-209ENST00000572760 LY6KQ17RY6 165 aa16.48■□□□□ 0.23
NPLOC4-209ENST00000572760 DUSP28Q4G0W2 176 aa16.48■□□□□ 0.23
NPLOC4-209ENST00000572760 NIPA1Q7RTP0 329 aa16.48■□□□□ 0.23
NPLOC4-209ENST00000572760 FERMT3Q86UX7 667 aa16.48■□□□□ 0.23
NPLOC4-209ENST00000572760 CYP2W1Q8TAV3 490 aa16.48■□□□□ 0.23
NPLOC4-209ENST00000572760 PAK6Q9NQU5 681 aaPredicted RBP16.48■□□□□ 0.23
NPLOC4-209ENST00000572760 PKD2L1Q9P0L9 805 aa16.48■□□□□ 0.23
NPLOC4-209ENST00000572760 DDX41Q9UJV9 622 aaKnown RBP16.48■□□□□ 0.23
NPLOC4-209ENST00000572760 MYH15Q9Y2K3 1946 aa16.48■□□□□ 0.23
NPLOC4-209ENST00000572760 MYH9P35579 1960 aaKnown RBP16.47■□□□□ 0.23
NPLOC4-209ENST00000572760 SPATA31C2B4DYI2 1134 aa16.47■□□□□ 0.23
NPLOC4-209ENST00000572760 FAM86B1E9PN63 330 aa16.47■□□□□ 0.23
NPLOC4-209ENST00000572760 MEIS1O00470 390 aa16.47■□□□□ 0.23
NPLOC4-209ENST00000572760 DYNC1LI2O43237 492 aaPredicted RBP16.47■□□□□ 0.23
NPLOC4-209ENST00000572760 TDP2O95551 362 aa16.47■□□□□ 0.23
NPLOC4-209ENST00000572760 GH1P01241 217 aa16.47■□□□□ 0.23
NPLOC4-209ENST00000572760 TFRCP02786 760 aaKnown RBP16.47■□□□□ 0.23
NPLOC4-209ENST00000572760 FAM86B2P0C5J1 330 aa16.47■□□□□ 0.23
NPLOC4-209ENST00000572760 GCFC2P16383 781 aaKnown RBP16.47■□□□□ 0.23
NPLOC4-209ENST00000572760 NEDD9Q14511 834 aa16.47■□□□□ 0.23
NPLOC4-209ENST00000572760 MOXD1Q6UVY6 613 aa16.47■□□□□ 0.23
NPLOC4-209ENST00000572760 DHX37Q8IY37 1157 aaKnown RBP16.47■□□□□ 0.23
NPLOC4-209ENST00000572760 GIMAP8Q8ND71 665 aaPredicted RBP16.47■□□□□ 0.23
NPLOC4-209ENST00000572760 OR6J1Q8NGC5 347 aa16.47■□□□□ 0.23
NPLOC4-209ENST00000572760 LENG1Q96BZ8 264 aaPredicted RBP16.47■□□□□ 0.23
NPLOC4-209ENST00000572760 MLXIPQ9HAP2 919 aa16.47■□□□□ 0.23
NPLOC4-209ENST00000572760 XPNPEP3Q9NQH7 507 aa16.47■□□□□ 0.23
NPLOC4-209ENST00000572760 KCNH7Q9NS40 1196 aa16.47■□□□□ 0.23
NPLOC4-209ENST00000572760 DDX25Q9UHL0 483 aaKnown RBP16.47■□□□□ 0.23
NPLOC4-209ENST00000572760 MTMR6Q9Y217 621 aa16.47■□□□□ 0.23
NPLOC4-209ENST00000572760 KAT6AQ92794 2004 aa16.46■□□□□ 0.23
NPLOC4-209ENST00000572760 CCDC85CA6NKD9 419 aa16.46■□□□□ 0.23
NPLOC4-209ENST00000572760 SORBS3O60504 671 aa16.46■□□□□ 0.23
NPLOC4-209ENST00000572760 ARIH2O95376 493 aa16.46■□□□□ 0.23
NPLOC4-209ENST00000572760 SGPL1O95470 568 aa16.46■□□□□ 0.23
NPLOC4-209ENST00000572760 GGPS1O95749 300 aa16.46■□□□□ 0.23
NPLOC4-209ENST00000572760 ARP10275 920 aa16.46■□□□□ 0.23
NPLOC4-209ENST00000572760 BRDTQ58F21 947 aaPredicted RBP16.46■□□□□ 0.23
NPLOC4-209ENST00000572760 GJC2Q5T442 439 aaPredicted RBP16.46■□□□□ 0.23
NPLOC4-209ENST00000572760 CCDC62Q6P9F0 684 aa16.46■□□□□ 0.23
NPLOC4-209ENST00000572760 BRAPQ7Z569 592 aa16.46■□□□□ 0.23
NPLOC4-209ENST00000572760 TLK2Q86UE8 772 aa16.46■□□□□ 0.23
NPLOC4-209ENST00000572760 ARRDC4Q8NCT1 418 aa16.46■□□□□ 0.23
NPLOC4-209ENST00000572760 U2AF1L4Q8WU68 220 aaKnown RBP16.46■□□□□ 0.23
NPLOC4-209ENST00000572760 COPS5Q92905 334 aa16.46■□□□□ 0.23
NPLOC4-209ENST00000572760 TCEAL9Q9UHQ7 104 aa16.46■□□□□ 0.23
NPLOC4-209ENST00000572760 GNEQ9Y223 722 aaKnown RBP16.46■□□□□ 0.23
NPLOC4-209ENST00000572760 Q9Y3F1 56 aa16.46■□□□□ 0.23
NPLOC4-209ENST00000572760 WDR81Q562E7 1941 aa16.46■□□□□ 0.23
NPLOC4-209ENST00000572760 IGLV3-22A0A075B6J6 115 aa16.45■□□□□ 0.22
NPLOC4-209ENST00000572760 CYP3A7-CYP3A51PA0A087WV96 503 aa16.45■□□□□ 0.22
NPLOC4-209ENST00000572760 PGK1P00558 417 aa16.45■□□□□ 0.22
NPLOC4-209ENST00000572760 C6orf222P0C671 652 aaPredicted RBP16.45■□□□□ 0.22
NPLOC4-209ENST00000572760 UBA1P22314 1058 aaKnown RBP16.45■□□□□ 0.22
NPLOC4-209ENST00000572760 CYP3A7P24462 503 aa16.45■□□□□ 0.22
NPLOC4-209ENST00000572760 TRAPPC10P48553 1259 aa16.45■□□□□ 0.22
NPLOC4-209ENST00000572760 SEMA3FQ13275 785 aa16.45■□□□□ 0.22
NPLOC4-209ENST00000572760 LAMC2Q13753 1193 aa16.45■□□□□ 0.22
NPLOC4-209ENST00000572760 Q4G0T1 1027 aa16.45■□□□□ 0.22
NPLOC4-209ENST00000572760 RILPL1Q5EBL4 403 aa16.45■□□□□ 0.22
NPLOC4-209ENST00000572760 TTC38Q5R3I4 469 aa16.45■□□□□ 0.22
NPLOC4-209ENST00000572760 TMEM63BQ5T3F8 832 aa16.45■□□□□ 0.22
NPLOC4-209ENST00000572760 FOXD4L5Q5VV16 416 aaPredicted RBP16.45■□□□□ 0.22
NPLOC4-209ENST00000572760 LHX8Q68G74 356 aa16.45■□□□□ 0.22
NPLOC4-209ENST00000572760 PPP4R3AQ6IN85 833 aa16.45■□□□□ 0.22
NPLOC4-209ENST00000572760 RNF180Q86T96 592 aa16.45■□□□□ 0.22
NPLOC4-209ENST00000572760 FOXD4L4Q8WXT5 416 aaPredicted RBP16.45■□□□□ 0.22
NPLOC4-209ENST00000572760 UIMC1Q96RL1 719 aa16.45■□□□□ 0.22
NPLOC4-209ENST00000572760 SENP7Q9BQF6 1050 aa16.45■□□□□ 0.22
NPLOC4-209ENST00000572760 SDF4Q9BRK5 362 aa16.45■□□□□ 0.22
NPLOC4-209ENST00000572760 ZNF577Q9BSK1 485 aa16.45■□□□□ 0.22
NPLOC4-209ENST00000572760 ZSCAN16Q9H4T2 348 aaPredicted RBP16.45■□□□□ 0.22
NPLOC4-209ENST00000572760 AGO4Q9HCK5 861 aaKnown RBP16.45■□□□□ 0.22
NPLOC4-209ENST00000572760 ADCY6O43306 1168 aa16.44■□□□□ 0.22
NPLOC4-209ENST00000572760 EDIL3O43854 480 aa16.44■□□□□ 0.22
NPLOC4-209ENST00000572760 ATP9AO75110 1047 aa16.44■□□□□ 0.22
NPLOC4-209ENST00000572760 BAG4O95429 457 aaKnown RBP16.44■□□□□ 0.22
NPLOC4-209ENST00000572760 MCM7P33993 719 aa16.44■□□□□ 0.22
NPLOC4-209ENST00000572760 SP2Q02086 613 aa16.44■□□□□ 0.22
NPLOC4-209ENST00000572760 ZNF174Q15697 407 aa16.44■□□□□ 0.22
NPLOC4-209ENST00000572760 CELF3Q5SZQ8 465 aaKnown RBP16.44■□□□□ 0.22
NPLOC4-209ENST00000572760 CYFIP1Q7L576 1253 aa16.44■□□□□ 0.22
NPLOC4-209ENST00000572760 TCHHQ07283 1943 aa16.44■□□□□ 0.22
NPLOC4-209ENST00000572760 SYNRGQ9UMZ2 1314 aa16.44■□□□□ 0.22
NPLOC4-209ENST00000572760 DDX39AO00148 427 aaKnown RBP16.43■□□□□ 0.22
NPLOC4-209ENST00000572760 IPO5O00410 1097 aaKnown RBP16.43■□□□□ 0.22
NPLOC4-209ENST00000572760 NOP56O00567 594 aaKnown RBP16.43■□□□□ 0.22
NPLOC4-209ENST00000572760 ZEB2O60315 1214 aa16.43■□□□□ 0.22
NPLOC4-209ENST00000572760 NEMFO60524 1076 aa16.43■□□□□ 0.22
NPLOC4-209ENST00000572760 ZSCAN22P10073 491 aaPredicted RBP16.43■□□□□ 0.22
NPLOC4-209ENST00000572760 KCNA2P16389 499 aa16.43■□□□□ 0.22
NPLOC4-209ENST00000572760 CAPN2P17655 700 aa16.43■□□□□ 0.22
NPLOC4-209ENST00000572760 PTGS1P23219 599 aa16.43■□□□□ 0.22
NPLOC4-209ENST00000572760 GJA8P48165 433 aa16.43■□□□□ 0.22
NPLOC4-209ENST00000572760 GJA9P57773 515 aa16.43■□□□□ 0.22
NPLOC4-209ENST00000572760 SP4Q02446 784 aa16.43■□□□□ 0.22
NPLOC4-209ENST00000572760 GNASQ5JWF2 1037 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms