RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 TRIM71Q2Q1W2 868 aaKnown RBP20.96■□□□□ 0.95
CHD3-214ENST00000572579 USP17L6PQ6QN14 398 aa20.96■□□□□ 0.95
CHD3-214ENST00000572579 ALG1Q9BT22 464 aa20.96■□□□□ 0.95
CHD3-214ENST00000572579 MSRAQ9UJ68 235 aa20.96■□□□□ 0.95
CHD3-214ENST00000572579 ZBBXA8MT70 800 aa20.95■□□□□ 0.94
CHD3-214ENST00000572579 PPFIA4O75335 1185 aa20.95■□□□□ 0.94
CHD3-214ENST00000572579 ATP2A2P16615 1042 aaKnown RBP20.95■□□□□ 0.94
CHD3-214ENST00000572579 SMARCA1P28370 1054 aa20.95■□□□□ 0.94
CHD3-214ENST00000572579 MCM5P33992 734 aa20.95■□□□□ 0.94
CHD3-214ENST00000572579 MFSD10Q14728 455 aa20.95■□□□□ 0.94
CHD3-214ENST00000572579 RAB30Q15771 203 aa20.95■□□□□ 0.94
CHD3-214ENST00000572579 KIAA0753Q2KHM9 967 aa20.95■□□□□ 0.94
CHD3-214ENST00000572579 SPATA33Q96N06 139 aa20.95■□□□□ 0.94
CHD3-214ENST00000572579 MTA3Q9BTC8 594 aa20.95■□□□□ 0.94
CHD3-214ENST00000572579 RTEL1Q9NZ71 1219 aa20.95■□□□□ 0.94
CHD3-214ENST00000572579 hCG_1642624A0A1W2PR95 340 aa20.94■□□□□ 0.94
CHD3-214ENST00000572579 SPATA31C2B4DYI2 1134 aa20.94■□□□□ 0.94
CHD3-214ENST00000572579 PFKMP08237 780 aa20.94■□□□□ 0.94
CHD3-214ENST00000572579 TGFB3P10600 412 aa20.94■□□□□ 0.94
CHD3-214ENST00000572579 CCND2P30279 289 aa20.94■□□□□ 0.94
CHD3-214ENST00000572579 RFC2P35250 354 aa20.94■□□□□ 0.94
CHD3-214ENST00000572579 RBL2Q08999 1139 aa20.94■□□□□ 0.94
CHD3-214ENST00000572579 BFSP2Q13515 415 aa20.94■□□□□ 0.94
CHD3-214ENST00000572579 RETREG2Q8NC44 543 aa20.94■□□□□ 0.94
CHD3-214ENST00000572579 INPP4AQ96PE3 977 aaPredicted RBP20.94■□□□□ 0.94
CHD3-214ENST00000572579 MTIF3Q9H2K0 278 aaKnown RBP20.94■□□□□ 0.94
CHD3-214ENST00000572579 NBNO60934 754 aa20.93■□□□□ 0.94
CHD3-214ENST00000572579 ICAM3P32942 547 aa20.93■□□□□ 0.94
CHD3-214ENST00000572579 LIFRP42702 1097 aa20.93■□□□□ 0.94
CHD3-214ENST00000572579 MBTPS1Q14703 1052 aa20.93■□□□□ 0.94
CHD3-214ENST00000572579 BMP2KLQ5H9B9 411 aa20.93■□□□□ 0.94
CHD3-214ENST00000572579 KCNV1Q6PIU1 500 aa20.93■□□□□ 0.94
CHD3-214ENST00000572579 CASC1Q6TDU7 716 aa20.93■□□□□ 0.94
CHD3-214ENST00000572579 RASEFQ8IZ41 740 aa20.93■□□□□ 0.94
CHD3-214ENST00000572579 CTCFLQ8NI51 663 aaPredicted RBP20.93■□□□□ 0.94
CHD3-214ENST00000572579 TMEM87BQ96K49 555 aa20.93■□□□□ 0.94
CHD3-214ENST00000572579 ANO2Q9NQ90 1003 aa20.93■□□□□ 0.94
CHD3-214ENST00000572579 NOD1Q9Y239 953 aa20.93■□□□□ 0.94
CHD3-214ENST00000572579 PCDHA11Q9Y5I1 949 aa20.93■□□□□ 0.94
CHD3-214ENST00000572579 SCN5AQ14524 2016 aa20.93■□□□□ 0.94
CHD3-214ENST00000572579 TET1Q8NFU7 2136 aa20.93■□□□□ 0.94
CHD3-214ENST00000572579 PIK3CDO00329 1044 aa20.92■□□□□ 0.94
CHD3-214ENST00000572579 CKBP12277 381 aa20.92■□□□□ 0.94
CHD3-214ENST00000572579 EXOSC10Q01780 885 aaKnown RBP20.92■□□□□ 0.94
CHD3-214ENST00000572579 TRAF1Q13077 416 aa20.92■□□□□ 0.94
CHD3-214ENST00000572579 C7orf31Q8N865 590 aa20.92■□□□□ 0.94
CHD3-214ENST00000572579 CAGE1Q8TC20 777 aa20.92■□□□□ 0.94
CHD3-214ENST00000572579 RRP36Q96EU6 259 aaKnown RBP20.92■□□□□ 0.94
CHD3-214ENST00000572579 SLC28A3Q9HAS3 691 aa20.92■□□□□ 0.94
CHD3-214ENST00000572579 KIAA1217Q5T5P2 1943 aa20.92■□□□□ 0.94
CHD3-214ENST00000572579 EPOPA6NHQ4 379 aa20.91■□□□□ 0.94
CHD3-214ENST00000572579 SELPP16109 830 aa20.91■□□□□ 0.94
CHD3-214ENST00000572579 KIF5BP33176 963 aa20.91■□□□□ 0.94
CHD3-214ENST00000572579 MUC3AQ02505 3323 aa20.91■□□□□ 0.94
CHD3-214ENST00000572579 MYO9BQ13459 2157 aa20.91■□□□□ 0.94
CHD3-214ENST00000572579 ADCK5Q3MIX3 580 aa20.91■□□□□ 0.94
CHD3-214ENST00000572579 NFXL1Q6ZNB6 911 aa20.91■□□□□ 0.94
CHD3-214ENST00000572579 SPRED2Q7Z698 418 aa20.91■□□□□ 0.94
CHD3-214ENST00000572579 TMCO2Q7Z6W1 182 aaPredicted RBP20.91■□□□□ 0.94
CHD3-214ENST00000572579 TMTC2Q8N394 836 aa20.91■□□□□ 0.94
CHD3-214ENST00000572579 CCDC82Q8N4S0 544 aa20.91■□□□□ 0.94
CHD3-214ENST00000572579 AFAP1L1Q8TED9 768 aa20.91■□□□□ 0.94
CHD3-214ENST00000572579 TCEANC2Q96MN5 208 aa20.91■□□□□ 0.94
CHD3-214ENST00000572579 OSBPL7Q9BZF2 842 aa20.91■□□□□ 0.94
CHD3-214ENST00000572579 FTOQ9C0B1 505 aaKnown RBP eCLIP20.91■□□□□ 0.94
CHD3-214ENST00000572579 REV3LO60673 3130 aa20.91■□□□□ 0.94
CHD3-214ENST00000572579 MYH6P13533 1939 aa20.9■□□□□ 0.94
CHD3-214ENST00000572579 RFXAPO00287 272 aa20.9■□□□□ 0.94
CHD3-214ENST00000572579 CXCL10P02778 98 aa20.9■□□□□ 0.94
CHD3-214ENST00000572579 CA3P07451 260 aa20.9■□□□□ 0.94
CHD3-214ENST00000572579 HOXC8P31273 242 aa20.9■□□□□ 0.94
CHD3-214ENST00000572579 ZNF618Q5T7W0 954 aa20.9■□□□□ 0.94
CHD3-214ENST00000572579 TMTC3Q6ZXV5 915 aa20.9■□□□□ 0.94
CHD3-214ENST00000572579 LRRC8DQ7L1W4 858 aa20.9■□□□□ 0.94
CHD3-214ENST00000572579 CENPQQ7L2Z9 268 aaPredicted RBP20.9■□□□□ 0.94
CHD3-214ENST00000572579 SGMS1Q86VZ5 419 aa20.9■□□□□ 0.94
CHD3-214ENST00000572579 FANCBQ8NB91 859 aa20.9■□□□□ 0.94
CHD3-214ENST00000572579 LZTS2Q9BRK4 669 aa20.9■□□□□ 0.94
CHD3-214ENST00000572579 MLXIPQ9HAP2 919 aa20.9■□□□□ 0.94
CHD3-214ENST00000572579 BRPF3Q9ULD4 1205 aa20.9■□□□□ 0.94
CHD3-214ENST00000572579 CCDC69A6NI79 296 aa20.89■□□□□ 0.93
CHD3-214ENST00000572579 FUT2Q10981 343 aa20.89■□□□□ 0.93
CHD3-214ENST00000572579 PTK7Q13308 1070 aa20.89■□□□□ 0.93
CHD3-214ENST00000572579 CYFIP1Q7L576 1253 aa20.89■□□□□ 0.93
CHD3-214ENST00000572579 HERC6Q8IVU3 1022 aa20.89■□□□□ 0.93
CHD3-214ENST00000572579 PHOSPHO2Q8TCD6 241 aa20.89■□□□□ 0.93
CHD3-214ENST00000572579 PPM1EQ8WY54 764 aa20.89■□□□□ 0.93
CHD3-214ENST00000572579 GPR20Q99678 358 aa20.89■□□□□ 0.93
CHD3-214ENST00000572579 KATNAL1Q9BW62 490 aa20.89■□□□□ 0.93
CHD3-214ENST00000572579 XIRP2A4UGR9 3374 aa20.89■□□□□ 0.93
CHD3-214ENST00000572579 TTC28Q96AY4 2481 aa20.88■□□□□ 0.93
CHD3-214ENST00000572579 ATP9AO75110 1047 aa20.88■□□□□ 0.93
CHD3-214ENST00000572579 LGALS2P05162 132 aa20.88■□□□□ 0.93
CHD3-214ENST00000572579 ITGB5P18084 799 aa20.88■□□□□ 0.93
CHD3-214ENST00000572579 GNAQP50148 359 aa20.88■□□□□ 0.93
CHD3-214ENST00000572579 UBE2SQ16763 222 aa20.88■□□□□ 0.93
CHD3-214ENST00000572579 PCNX4Q63HM2 1172 aa20.88■□□□□ 0.93
CHD3-214ENST00000572579 PPP2R2DQ66LE6 453 aa20.88■□□□□ 0.93
CHD3-214ENST00000572579 TYW1BQ6NUM6 668 aa20.88■□□□□ 0.93
CHD3-214ENST00000572579 METTL7BQ6UX53 244 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms