RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 SEPT14Q6ZU15 432 aa8.56□□□□□ -1.04
SMG6-205ENST00000570659 FAM160B2Q86V87 743 aa8.56□□□□□ -1.04
SMG6-205ENST00000570659 LINC01599Q8WXQ3 324 aa8.56□□□□□ -1.04
SMG6-205ENST00000570659 TOP1MTQ969P6 601 aa8.56□□□□□ -1.04
SMG6-205ENST00000570659 TAAR1Q96RJ0 339 aa8.56□□□□□ -1.04
SMG6-205ENST00000570659 GPCPD1Q9NPB8 672 aa8.56□□□□□ -1.04
SMG6-205ENST00000570659 GPHNQ9NQX3 736 aaPredicted RBP8.56□□□□□ -1.04
SMG6-205ENST00000570659 HCSTQ9UBK5 93 aa8.56□□□□□ -1.04
SMG6-205ENST00000570659 FRYLO94915 3013 aa8.55□□□□□ -1.04
SMG6-205ENST00000570659 PROB1E7EW31 1015 aa8.55□□□□□ -1.04
SMG6-205ENST00000570659 PLA2G6O60733 806 aa8.55□□□□□ -1.04
SMG6-205ENST00000570659 F2P00734 622 aa8.55□□□□□ -1.04
SMG6-205ENST00000570659 CTNNB1P35222 781 aa8.55□□□□□ -1.04
SMG6-205ENST00000570659 NOVP48745 357 aa8.55□□□□□ -1.04
SMG6-205ENST00000570659 SP2Q02086 613 aa8.55□□□□□ -1.04
SMG6-205ENST00000570659 PDE4DQ08499 809 aa8.55□□□□□ -1.04
SMG6-205ENST00000570659 MFSD10Q14728 455 aa8.55□□□□□ -1.04
SMG6-205ENST00000570659 KIAA0753Q2KHM9 967 aa8.55□□□□□ -1.04
SMG6-205ENST00000570659 FRMD5Q7Z6J6 570 aa8.55□□□□□ -1.04
SMG6-205ENST00000570659 IFNL3Q8IZI9 196 aa8.55□□□□□ -1.04
SMG6-205ENST00000570659 SCFD2Q8WU76 684 aa8.55□□□□□ -1.04
SMG6-205ENST00000570659 CRBNQ96SW2 442 aa8.55□□□□□ -1.04
SMG6-205ENST00000570659 CD207Q9UJ71 328 aa8.55□□□□□ -1.04
SMG6-205ENST00000570659 TRPC6Q9Y210 931 aa8.55□□□□□ -1.04
SMG6-205ENST00000570659 USP15Q9Y4E8 981 aaPredicted RBP8.55□□□□□ -1.04
SMG6-205ENST00000570659 MYO10Q9HD67 2058 aa8.54□□□□□ -1.04
SMG6-205ENST00000570659 C5orf67F2Z3F1 127 aa8.54□□□□□ -1.04
SMG6-205ENST00000570659 IPO8O15397 1037 aaKnown RBP8.54□□□□□ -1.04
SMG6-205ENST00000570659 TREHO43280 583 aa8.54□□□□□ -1.04
SMG6-205ENST00000570659 EYA4O95677 639 aa8.54□□□□□ -1.04
SMG6-205ENST00000570659 IFIT2P09913 472 aaKnown RBP8.54□□□□□ -1.04
SMG6-205ENST00000570659 TSPY3P0CV98 308 aa8.54□□□□□ -1.04
SMG6-205ENST00000570659 TSPY8P0CW00 308 aa8.54□□□□□ -1.04
SMG6-205ENST00000570659 HOXC8P31273 242 aa8.54□□□□□ -1.04
SMG6-205ENST00000570659 THPOP40225 353 aa8.54□□□□□ -1.04
SMG6-205ENST00000570659 PDE4BQ07343 736 aa8.54□□□□□ -1.04
SMG6-205ENST00000570659 PTK7Q13308 1070 aa8.54□□□□□ -1.04
SMG6-205ENST00000570659 PTPROQ16827 1216 aa8.54□□□□□ -1.04
SMG6-205ENST00000570659 CCDC96Q2M329 555 aa8.54□□□□□ -1.04
SMG6-205ENST00000570659 SYDE2Q5VT97 1194 aa8.54□□□□□ -1.04
SMG6-205ENST00000570659 BTNL9Q6UXG8 535 aa8.54□□□□□ -1.04
SMG6-205ENST00000570659 RNF207Q6ZRF8 634 aa8.54□□□□□ -1.04
SMG6-205ENST00000570659 SERINC5Q86VE9 423 aa8.54□□□□□ -1.04
SMG6-205ENST00000570659 ZNF444Q8N0Y2 327 aaPredicted RBP8.54□□□□□ -1.04
SMG6-205ENST00000570659 SMRP1Q8NCR6 262 aa8.54□□□□□ -1.04
SMG6-205ENST00000570659 IL31RAQ8NI17 732 aa8.54□□□□□ -1.04
SMG6-205ENST00000570659 CHURC1Q8WUH1 139 aa8.54□□□□□ -1.04
SMG6-205ENST00000570659 RMDN1Q96DB5 314 aa8.54□□□□□ -1.04
SMG6-205ENST00000570659 ZBTB10Q96DT7 871 aa8.54□□□□□ -1.04
SMG6-205ENST00000570659 RPGRIP1Q96KN7 1286 aa8.54□□□□□ -1.04
SMG6-205ENST00000570659 YME1L1Q96TA2 773 aa8.54□□□□□ -1.04
SMG6-205ENST00000570659 C16orf70Q9BSU1 422 aa8.54□□□□□ -1.04
SMG6-205ENST00000570659 DDX41Q9UJV9 622 aaKnown RBP8.54□□□□□ -1.04
SMG6-205ENST00000570659 RALYQ9UKM9 306 aaKnown RBP8.54□□□□□ -1.04
SMG6-205ENST00000570659 EP300Q09472 2414 aaPredicted RBP8.54□□□□□ -1.04
SMG6-205ENST00000570659 CFAP47Q6ZTR5 3102 aa8.54□□□□□ -1.04
SMG6-205ENST00000570659 RSPH10B2B2RC85 870 aa8.53□□□□□ -1.04
SMG6-205ENST00000570659 OPLAHO14841 1288 aa8.53□□□□□ -1.04
SMG6-205ENST00000570659 PER2O15055 1255 aa8.53□□□□□ -1.04
SMG6-205ENST00000570659 AMHP03971 560 aa8.53□□□□□ -1.04
SMG6-205ENST00000570659 ITGB1P05556 798 aa8.53□□□□□ -1.04
SMG6-205ENST00000570659 RSPH10BP0C881 870 aa8.53□□□□□ -1.04
SMG6-205ENST00000570659 HOXD8P13378 290 aaPredicted RBP8.53□□□□□ -1.04
SMG6-205ENST00000570659 BMPR1AP36894 532 aa8.53□□□□□ -1.04
SMG6-205ENST00000570659 NBL1P41271 181 aa8.53□□□□□ -1.04
SMG6-205ENST00000570659 TDO2P48775 406 aa8.53□□□□□ -1.04
SMG6-205ENST00000570659 PPARAQ07869 468 aa8.53□□□□□ -1.04
SMG6-205ENST00000570659 SIGLEC14Q08ET2 396 aa8.53□□□□□ -1.04
SMG6-205ENST00000570659 HSDL1Q3SXM5 330 aa8.53□□□□□ -1.04
SMG6-205ENST00000570659 USH1GQ495M9 461 aa8.53□□□□□ -1.04
SMG6-205ENST00000570659 VPS53Q5VIR6 699 aa8.53□□□□□ -1.04
SMG6-205ENST00000570659 RBM23Q86U06 439 aaKnown RBP8.53□□□□□ -1.04
SMG6-205ENST00000570659 ERC1Q8IUD2 1116 aa8.53□□□□□ -1.04
SMG6-205ENST00000570659 SUGP1Q8IWZ8 645 aaKnown RBP8.53□□□□□ -1.04
SMG6-205ENST00000570659 AMOTL1Q8IY63 956 aa8.53□□□□□ -1.04
SMG6-205ENST00000570659 CLASRPQ8N2M8 674 aaKnown RBP8.53□□□□□ -1.04
SMG6-205ENST00000570659 SYTL5Q8TDW5 730 aaPredicted RBP8.53□□□□□ -1.04
SMG6-205ENST00000570659 OTUD7AQ8TE49 926 aaPredicted RBP8.53□□□□□ -1.04
SMG6-205ENST00000570659 KIF1BPQ96EK5 621 aa8.53□□□□□ -1.04
SMG6-205ENST00000570659 APOL5Q9BWW9 433 aa8.53□□□□□ -1.04
SMG6-205ENST00000570659 IFIH1Q9BYX4 1025 aaKnown RBP8.53□□□□□ -1.04
SMG6-205ENST00000570659 UPF3BQ9BZI7 483 aaKnown RBP8.53□□□□□ -1.04
SMG6-205ENST00000570659 SYNPO2Q9UMS6 1093 aa8.53□□□□□ -1.04
SMG6-205ENST00000570659 STX8Q9UNK0 236 aa8.53□□□□□ -1.04
SMG6-205ENST00000570659 MRPL42Q9Y6G3 142 aaKnown RBP8.53□□□□□ -1.04
SMG6-205ENST00000570659 CEP250Q9BV73 2442 aa8.52□□□□□ -1.05
SMG6-205ENST00000570659 NKRFO15226 690 aaKnown RBP eCLIP8.52□□□□□ -1.05
SMG6-205ENST00000570659 GALR2O43603 387 aaPredicted RBP8.52□□□□□ -1.05
SMG6-205ENST00000570659 KPNA6O60684 536 aa8.52□□□□□ -1.05
SMG6-205ENST00000570659 GH1P01241 217 aa8.52□□□□□ -1.05
SMG6-205ENST00000570659 CHRNA1P02708 482 aa8.52□□□□□ -1.05
SMG6-205ENST00000570659 GOLGA8HP0CJ92 632 aa8.52□□□□□ -1.05
SMG6-205ENST00000570659 FDX1P10109 184 aa8.52□□□□□ -1.05
SMG6-205ENST00000570659 NRIP1P48552 1158 aa8.52□□□□□ -1.05
SMG6-205ENST00000570659 GIMAP6Q6P9H5 292 aa8.52□□□□□ -1.05
SMG6-205ENST00000570659 RUFY4Q6ZNE9 571 aa8.52□□□□□ -1.05
SMG6-205ENST00000570659 RTN4RL1Q86UN2 441 aaPredicted RBP8.52□□□□□ -1.05
SMG6-205ENST00000570659 TRIM50Q86XT4 487 aa8.52□□□□□ -1.05
SMG6-205ENST00000570659 CRIPAKQ8N1N5 446 aa8.52□□□□□ -1.05
SMG6-205ENST00000570659 CCDC155Q8N6L0 562 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms