RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 IL31RAQ8NI17 732 aa11.88□□□□□ -0.51
CDH3-210ENST00000569117 PXYLP1Q8TE99 480 aa11.88□□□□□ -0.51
CDH3-210ENST00000569117 ZNF296Q8WUU4 475 aaPredicted RBP11.88□□□□□ -0.51
CDH3-210ENST00000569117 ERO1AQ96HE7 468 aa11.88□□□□□ -0.51
CDH3-210ENST00000569117 PURBQ96QR8 312 aaKnown RBP11.88□□□□□ -0.51
CDH3-210ENST00000569117 TAAR1Q96RJ0 339 aa11.88□□□□□ -0.51
CDH3-210ENST00000569117 IWS1Q96ST2 819 aa11.88□□□□□ -0.51
CDH3-210ENST00000569117 NAP1L4Q99733 375 aaKnown RBP11.88□□□□□ -0.51
CDH3-210ENST00000569117 APBA2Q99767 749 aa11.88□□□□□ -0.51
CDH3-210ENST00000569117 NUDT12Q9BQG2 462 aa11.88□□□□□ -0.51
CDH3-210ENST00000569117 ARHGAP39Q9C0H5 1083 aa11.88□□□□□ -0.51
CDH3-210ENST00000569117 DIS3Q9Y2L1 958 aaKnown RBP11.88□□□□□ -0.51
CDH3-210ENST00000569117 EDIL3O43854 480 aa11.87□□□□□ -0.51
CDH3-210ENST00000569117 FKTNO75072 461 aa11.87□□□□□ -0.51
CDH3-210ENST00000569117 COBLO75128 1261 aa11.87□□□□□ -0.51
CDH3-210ENST00000569117 GNRH1P01148 92 aa11.87□□□□□ -0.51
CDH3-210ENST00000569117 CIITAP33076 1130 aa11.87□□□□□ -0.51
CDH3-210ENST00000569117 RGS2P41220 211 aa11.87□□□□□ -0.51
CDH3-210ENST00000569117 TOB1P50616 345 aaPredicted RBP11.87□□□□□ -0.51
CDH3-210ENST00000569117 CAP1Q01518 475 aa11.87□□□□□ -0.51
CDH3-210ENST00000569117 TTC38Q5R3I4 469 aa11.87□□□□□ -0.51
CDH3-210ENST00000569117 ARHGEF16Q5VV41 709 aa11.87□□□□□ -0.51
CDH3-210ENST00000569117 ATL3Q6DD88 541 aa11.87□□□□□ -0.51
CDH3-210ENST00000569117 FAM173BQ6P4H8 233 aa11.87□□□□□ -0.51
CDH3-210ENST00000569117 CD99L2Q8TCZ2 262 aa11.87□□□□□ -0.51
CDH3-210ENST00000569117 MORC4Q8TE76 937 aa11.87□□□□□ -0.51
CDH3-210ENST00000569117 MPHOSPH6Q99547 160 aaKnown RBP11.87□□□□□ -0.51
CDH3-210ENST00000569117 SLC5A4Q9NY91 659 aa11.87□□□□□ -0.51
CDH3-210ENST00000569117 GJD2Q9UKL4 321 aa11.87□□□□□ -0.51
CDH3-210ENST00000569117 COLQQ9Y215 455 aaPredicted RBP11.87□□□□□ -0.51
CDH3-210ENST00000569117 ADGRG1Q9Y653 693 aa11.87□□□□□ -0.51
CDH3-210ENST00000569117 CYP3A7-CYP3A51PA0A087WV96 503 aa11.86□□□□□ -0.51
CDH3-210ENST00000569117 B4DLN1 442 aa11.86□□□□□ -0.51
CDH3-210ENST00000569117 WNT7AO00755 349 aa11.86□□□□□ -0.51
CDH3-210ENST00000569117 STAM2O75886 525 aa11.86□□□□□ -0.51
CDH3-210ENST00000569117 TDP2O95551 362 aa11.86□□□□□ -0.51
CDH3-210ENST00000569117 NR3C2P08235 984 aa11.86□□□□□ -0.51
CDH3-210ENST00000569117 CYP3A7P24462 503 aa11.86□□□□□ -0.51
CDH3-210ENST00000569117 CCND2P30279 289 aa11.86□□□□□ -0.51
CDH3-210ENST00000569117 UBXN2AP68543 259 aa11.86□□□□□ -0.51
CDH3-210ENST00000569117 LETM2Q2VYF4 491 aa11.86□□□□□ -0.51
CDH3-210ENST00000569117 PPP4R3AQ6IN85 833 aa11.86□□□□□ -0.51
CDH3-210ENST00000569117 MAMDC4Q6UXC1 1216 aa11.86□□□□□ -0.51
CDH3-210ENST00000569117 DPP9Q86TI2 863 aa11.86□□□□□ -0.51
CDH3-210ENST00000569117 MSL3Q8N5Y2 521 aaKnown RBP11.86□□□□□ -0.51
CDH3-210ENST00000569117 KCTD17Q8N5Z5 321 aa11.86□□□□□ -0.51
CDH3-210ENST00000569117 TNPO1Q92973 898 aaKnown RBP11.86□□□□□ -0.51
CDH3-210ENST00000569117 MAML3Q96JK9 1138 aa11.86□□□□□ -0.51
CDH3-210ENST00000569117 MBOAT7Q96N66 472 aa11.86□□□□□ -0.51
CDH3-210ENST00000569117 ZNF396Q96N95 335 aaPredicted RBP11.86□□□□□ -0.51
CDH3-210ENST00000569117 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.86□□□□□ -0.51
CDH3-210ENST00000569117 TSKSQ9UJT2 592 aa11.86□□□□□ -0.51
CDH3-210ENST00000569117 SYNGAP1Q96PV0 1343 aa11.86□□□□□ -0.51
CDH3-210ENST00000569117 IGLV3-22A0A075B6J6 115 aa11.85□□□□□ -0.51
CDH3-210ENST00000569117 ASB14A6NK59 587 aa11.85□□□□□ -0.51
CDH3-210ENST00000569117 FAM86B1E9PN63 330 aa11.85□□□□□ -0.51
CDH3-210ENST00000569117 NEMFO60524 1076 aa11.85□□□□□ -0.51
CDH3-210ENST00000569117 CCNT1O60563 726 aaKnown RBP11.85□□□□□ -0.51
CDH3-210ENST00000569117 BMP15O95972 392 aa11.85□□□□□ -0.51
CDH3-210ENST00000569117 FAM86B2P0C5J1 330 aa11.85□□□□□ -0.51
CDH3-210ENST00000569117 XRCC5P13010 732 aaKnown RBP11.85□□□□□ -0.51
CDH3-210ENST00000569117 NASPP49321 788 aaPredicted RBP11.85□□□□□ -0.51
CDH3-210ENST00000569117 KRT85P78386 507 aa11.85□□□□□ -0.51
CDH3-210ENST00000569117 MRPS9P82933 396 aaKnown RBP11.85□□□□□ -0.51
CDH3-210ENST00000569117 SETQ01105 290 aaPredicted RBP11.85□□□□□ -0.51
CDH3-210ENST00000569117 DNM1Q05193 864 aaKnown RBP11.85□□□□□ -0.51
CDH3-210ENST00000569117 PRKCZQ05513 592 aa11.85□□□□□ -0.51
CDH3-210ENST00000569117 CEP55Q53EZ4 464 aa11.85□□□□□ -0.51
CDH3-210ENST00000569117 OLFML2BQ68BL8 750 aa11.85□□□□□ -0.51
CDH3-210ENST00000569117 PADI6Q6TGC4 694 aa11.85□□□□□ -0.51
CDH3-210ENST00000569117 CLEC17AQ6ZS10 378 aa11.85□□□□□ -0.51
CDH3-210ENST00000569117 NIPA1Q7RTP0 329 aa11.85□□□□□ -0.51
CDH3-210ENST00000569117 VSIG10LQ86VR7 867 aa11.85□□□□□ -0.51
CDH3-210ENST00000569117 NPLOC4Q8TAT6 608 aa11.85□□□□□ -0.51
CDH3-210ENST00000569117 LENG9Q96B70 501 aa11.85□□□□□ -0.51
CDH3-210ENST00000569117 INPP4AQ96PE3 977 aaPredicted RBP11.85□□□□□ -0.51
CDH3-210ENST00000569117 USP28Q96RU2 1077 aa11.85□□□□□ -0.51
CDH3-210ENST00000569117 FTOQ9C0B1 505 aaKnown RBP eCLIP11.85□□□□□ -0.51
CDH3-210ENST00000569117 PCDHB6Q9Y5E3 794 aa11.85□□□□□ -0.51
CDH3-210ENST00000569117 UBIAD1Q9Y5Z9 338 aa11.85□□□□□ -0.51
CDH3-210ENST00000569117 MORC2Q9Y6X9 1032 aaPredicted RBP11.85□□□□□ -0.51
CDH3-210ENST00000569117 SLC37A4O43826 429 aa11.84□□□□□ -0.51
CDH3-210ENST00000569117 YEATS4O95619 227 aa11.84□□□□□ -0.51
CDH3-210ENST00000569117 IGHA2P01877 340 aa11.84□□□□□ -0.51
CDH3-210ENST00000569117 MYCLP12524 364 aaPredicted RBP11.84□□□□□ -0.51
CDH3-210ENST00000569117 ITGB5P18084 799 aa11.84□□□□□ -0.51
CDH3-210ENST00000569117 FLT3LGP49771 235 aa11.84□□□□□ -0.51
CDH3-210ENST00000569117 IRF5Q13568 498 aa11.84□□□□□ -0.51
CDH3-210ENST00000569117 ARHGEF6Q15052 776 aa11.84□□□□□ -0.51
CDH3-210ENST00000569117 STXBP2Q15833 593 aa11.84□□□□□ -0.51
CDH3-210ENST00000569117 Q4G0T1 1027 aa11.84□□□□□ -0.51
CDH3-210ENST00000569117 TMEM259Q4ZIN3 620 aa11.84□□□□□ -0.51
CDH3-210ENST00000569117 ANO1Q5XXA6 986 aa11.84□□□□□ -0.51
CDH3-210ENST00000569117 ARMCX2Q7L311 632 aa11.84□□□□□ -0.51
CDH3-210ENST00000569117 RTEL1Q9NZ71 1219 aa11.84□□□□□ -0.51
CDH3-210ENST00000569117 SRRDQ9UH36 339 aa11.84□□□□□ -0.51
CDH3-210ENST00000569117 DDX25Q9UHL0 483 aaKnown RBP11.84□□□□□ -0.51
CDH3-210ENST00000569117 CFAP45Q9UL16 551 aa11.84□□□□□ -0.51
CDH3-210ENST00000569117 GABRQQ9UN88 632 aa11.84□□□□□ -0.51
CDH3-210ENST00000569117 CEP131Q9UPN4 1083 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms