RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 TGFB3P10600 412 aa15.83■□□□□ 0.12
CNOT1-215ENST00000569020 CCND2P30279 289 aa15.83■□□□□ 0.12
CNOT1-215ENST00000569020 PTH1RQ03431 593 aa15.83■□□□□ 0.12
CNOT1-215ENST00000569020 RBL2Q08999 1139 aa15.83■□□□□ 0.12
CNOT1-215ENST00000569020 MYSM1Q5VVJ2 828 aa15.83■□□□□ 0.12
CNOT1-215ENST00000569020 VSIG10LQ86VR7 867 aa15.83■□□□□ 0.12
CNOT1-215ENST00000569020 CERS4Q9HA82 394 aa15.83■□□□□ 0.12
CNOT1-215ENST00000569020 DOCK5Q9H7D0 1870 aa15.82■□□□□ 0.12
CNOT1-215ENST00000569020 PNMA6FA0A0J9YX94 578 aa15.82■□□□□ 0.12
CNOT1-215ENST00000569020 E7EWF7 191 aa15.82■□□□□ 0.12
CNOT1-215ENST00000569020 GGPS1O95749 300 aa15.82■□□□□ 0.12
CNOT1-215ENST00000569020 CKBP12277 381 aa15.82■□□□□ 0.12
CNOT1-215ENST00000569020 PTK7Q13308 1070 aa15.82■□□□□ 0.12
CNOT1-215ENST00000569020 CELF3Q5SZQ8 465 aaKnown RBP15.82■□□□□ 0.12
CNOT1-215ENST00000569020 CNKSR3Q6P9H4 555 aa15.82■□□□□ 0.12
CNOT1-215ENST00000569020 FCHSD1Q86WN1 690 aa15.82■□□□□ 0.12
CNOT1-215ENST00000569020 DHX38Q92620 1227 aaKnown RBP15.82■□□□□ 0.12
CNOT1-215ENST00000569020 SPATA33Q96N06 139 aa15.82■□□□□ 0.12
CNOT1-215ENST00000569020 MLXIPQ9HAP2 919 aa15.82■□□□□ 0.12
CNOT1-215ENST00000569020 RFXAPO00287 272 aa15.81■□□□□ 0.12
CNOT1-215ENST00000569020 CYTH3O43739 400 aa15.81■□□□□ 0.12
CNOT1-215ENST00000569020 TLL1O43897 1013 aa15.81■□□□□ 0.12
CNOT1-215ENST00000569020 SORBS3O60504 671 aa15.81■□□□□ 0.12
CNOT1-215ENST00000569020 HOXD8P13378 290 aaPredicted RBP15.81■□□□□ 0.12
CNOT1-215ENST00000569020 WDR5P61964 334 aaKnown RBP15.81■□□□□ 0.12
CNOT1-215ENST00000569020 TAP1Q03518 808 aa15.81■□□□□ 0.12
CNOT1-215ENST00000569020 TROAPQ12815 778 aa15.81■□□□□ 0.12
CNOT1-215ENST00000569020 HSDL1Q3SXM5 330 aa15.81■□□□□ 0.12
CNOT1-215ENST00000569020 GNPTABQ3T906 1256 aa15.81■□□□□ 0.12
CNOT1-215ENST00000569020 CATIPQ7Z7H3 387 aa15.81■□□□□ 0.12
CNOT1-215ENST00000569020 ARNTL2Q8WYA1 636 aa15.81■□□□□ 0.12
CNOT1-215ENST00000569020 ZBED2Q9BTP6 218 aa15.81■□□□□ 0.12
CNOT1-215ENST00000569020 COL4A4P53420 1690 aaPredicted RBP15.8■□□□□ 0.12
CNOT1-215ENST00000569020 ABHD14A-ACY1A0A1B0GW23 586 aa15.8■□□□□ 0.12
CNOT1-215ENST00000569020 SGSM2O43147 1006 aa15.8■□□□□ 0.12
CNOT1-215ENST00000569020 NBNO60934 754 aa15.8■□□□□ 0.12
CNOT1-215ENST00000569020 CXCL10P02778 98 aa15.8■□□□□ 0.12
CNOT1-215ENST00000569020 POU3F3P20264 500 aaPredicted RBP15.8■□□□□ 0.12
CNOT1-215ENST00000569020 UBA1P22314 1058 aaKnown RBP15.8■□□□□ 0.12
CNOT1-215ENST00000569020 GPNMBQ14956 572 aa15.8■□□□□ 0.12
CNOT1-215ENST00000569020 SKIV2LQ15477 1246 aaKnown RBP15.8■□□□□ 0.12
CNOT1-215ENST00000569020 SLC35G1Q2M3R5 365 aa15.8■□□□□ 0.12
CNOT1-215ENST00000569020 IL31RAQ8NI17 732 aa15.8■□□□□ 0.12
CNOT1-215ENST00000569020 ADAMTS19Q8TE59 1207 aa15.8■□□□□ 0.12
CNOT1-215ENST00000569020 ZFP91Q96JP5 570 aaPredicted RBP15.8■□□□□ 0.12
CNOT1-215ENST00000569020 SENP2Q9HC62 589 aa15.8■□□□□ 0.12
CNOT1-215ENST00000569020 MTCH2Q9Y6C9 303 aa15.8■□□□□ 0.12
CNOT1-215ENST00000569020 TCF20Q9UGU0 1960 aaKnown RBP15.8■□□□□ 0.12
CNOT1-215ENST00000569020 SIP14410 1827 aa15.8■□□□□ 0.12
CNOT1-215ENST00000569020 MICAL3Q7RTP6 2002 aa15.79■□□□□ 0.12
CNOT1-215ENST00000569020 EFCAB14O75071 495 aa15.79■□□□□ 0.12
CNOT1-215ENST00000569020 STAM2O75886 525 aa15.79■□□□□ 0.12
CNOT1-215ENST00000569020 SP2Q02086 613 aa15.79■□□□□ 0.12
CNOT1-215ENST00000569020 IKBKEQ14164 716 aa15.79■□□□□ 0.12
CNOT1-215ENST00000569020 AAK1Q2M2I8 961 aa15.79■□□□□ 0.12
CNOT1-215ENST00000569020 ZNF618Q5T7W0 954 aa15.79■□□□□ 0.12
CNOT1-215ENST00000569020 CTCFLQ8NI51 663 aaPredicted RBP15.79■□□□□ 0.12
CNOT1-215ENST00000569020 MAP4K1Q92918 833 aa15.79■□□□□ 0.12
CNOT1-215ENST00000569020 VCANP13611 3396 aa15.79■□□□□ 0.12
CNOT1-215ENST00000569020 KAT6AQ92794 2004 aa15.78■□□□□ 0.12
CNOT1-215ENST00000569020 EPOPA6NHQ4 379 aa15.78■□□□□ 0.12
CNOT1-215ENST00000569020 H3BRB1 525 aa15.78■□□□□ 0.12
CNOT1-215ENST00000569020 NOP56O00567 594 aaKnown RBP15.78■□□□□ 0.12
CNOT1-215ENST00000569020 KIF5BP33176 963 aa15.78■□□□□ 0.12
CNOT1-215ENST00000569020 DEFB103AP81534 67 aa15.78■□□□□ 0.12
CNOT1-215ENST00000569020 ZNF200P98182 395 aaPredicted RBP15.78■□□□□ 0.12
CNOT1-215ENST00000569020 CASC1Q6TDU7 716 aa15.78■□□□□ 0.12
CNOT1-215ENST00000569020 MB21D2Q8IYB1 491 aaPredicted RBP15.78■□□□□ 0.12
CNOT1-215ENST00000569020 SMARCC2Q8TAQ2 1214 aa15.78■□□□□ 0.12
CNOT1-215ENST00000569020 IGDCC4Q8TDY8 1250 aa15.78■□□□□ 0.12
CNOT1-215ENST00000569020 PIBF1Q8WXW3 757 aa15.78■□□□□ 0.12
CNOT1-215ENST00000569020 GPKOWQ92917 476 aaPredicted RBP eCLIP15.78■□□□□ 0.12
CNOT1-215ENST00000569020 CUL5Q93034 780 aa15.78■□□□□ 0.12
CNOT1-215ENST00000569020 UHRF1Q96T88 793 aaPredicted RBP15.78■□□□□ 0.12
CNOT1-215ENST00000569020 MAP3K14Q99558 947 aa15.78■□□□□ 0.12
CNOT1-215ENST00000569020 C16orf70Q9BSU1 422 aa15.78■□□□□ 0.12
CNOT1-215ENST00000569020 TUT1Q9H6E5 874 aaKnown RBP15.78■□□□□ 0.12
CNOT1-215ENST00000569020 TAF6LQ9Y6J9 622 aa15.78■□□□□ 0.12
CNOT1-215ENST00000569020 CHD9Q3L8U1 2897 aa15.77■□□□□ 0.12
CNOT1-215ENST00000569020 FRMPD4Q14CM0 1322 aa15.77■□□□□ 0.12
CNOT1-215ENST00000569020 EMSYQ7Z589 1322 aa15.77■□□□□ 0.12
CNOT1-215ENST00000569020 C17orf102A2RUQ5 167 aa15.77■□□□□ 0.12
CNOT1-215ENST00000569020 DDAH1O94760 285 aa15.77■□□□□ 0.12
CNOT1-215ENST00000569020 ARHGEF15O94989 841 aa15.77■□□□□ 0.12
CNOT1-215ENST00000569020 LGALS2P05162 132 aa15.77■□□□□ 0.12
CNOT1-215ENST00000569020 ICAM3P32942 547 aa15.77■□□□□ 0.12
CNOT1-215ENST00000569020 ANTXR2P58335 489 aa15.77■□□□□ 0.12
CNOT1-215ENST00000569020 NEDD9Q14511 834 aa15.77■□□□□ 0.12
CNOT1-215ENST00000569020 TRIM71Q2Q1W2 868 aaKnown RBP15.77■□□□□ 0.12
CNOT1-215ENST00000569020 TMCO2Q7Z6W1 182 aaPredicted RBP15.77■□□□□ 0.12
CNOT1-215ENST00000569020 ATP6V0A1Q93050 837 aa15.77■□□□□ 0.12
CNOT1-215ENST00000569020 WNT8BQ93098 351 aa15.77■□□□□ 0.12
CNOT1-215ENST00000569020 RRP36Q96EU6 259 aaKnown RBP15.77■□□□□ 0.12
CNOT1-215ENST00000569020 MTA3Q9BTC8 594 aa15.77■□□□□ 0.12
CNOT1-215ENST00000569020 SPZ1Q9BXG8 430 aa15.77■□□□□ 0.12
CNOT1-215ENST00000569020 USP26Q9BXU7 913 aa15.77■□□□□ 0.12
CNOT1-215ENST00000569020 SEC63Q9UGP8 760 aaKnown RBP15.77■□□□□ 0.12
CNOT1-215ENST00000569020 RBM8AQ9Y5S9 174 aaKnown RBP15.77■□□□□ 0.12
CNOT1-215ENST00000569020 RSPH10B2B2RC85 870 aa15.76■□□□□ 0.11
CNOT1-215ENST00000569020 FIBPO43427 364 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms