RNA–Protein interactions for RNA: ENST00000568566.5

TSC2-223, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-223ENST00000568566 NTRK3Q16288 839 aa9.69□□□□□ -0.86
TSC2-223ENST00000568566 CDC37Q16543 378 aaPredicted RBP9.69□□□□□ -0.86
TSC2-223ENST00000568566 ME3Q16798 604 aa9.69□□□□□ -0.86
TSC2-223ENST00000568566 USH1GQ495M9 461 aa9.69□□□□□ -0.86
TSC2-223ENST00000568566 ASPRV1Q53RT3 343 aa9.69□□□□□ -0.86
TSC2-223ENST00000568566 IQSEC1Q6DN90 963 aa9.69□□□□□ -0.86
TSC2-223ENST00000568566 NSMFQ6X4W1 530 aa9.69□□□□□ -0.86
TSC2-223ENST00000568566 TMTC3Q6ZXV5 915 aa9.69□□□□□ -0.86
TSC2-223ENST00000568566 SPRED2Q7Z698 418 aa9.69□□□□□ -0.86
TSC2-223ENST00000568566 FAM160B2Q86V87 743 aa9.69□□□□□ -0.86
TSC2-223ENST00000568566 HOMER1Q86YM7 354 aa9.69□□□□□ -0.86
TSC2-223ENST00000568566 CLEC4DQ8WXI8 215 aa9.69□□□□□ -0.86
TSC2-223ENST00000568566 KHSRPQ92945 711 aaKnown RBP eCLIP9.69□□□□□ -0.86
TSC2-223ENST00000568566 MTMR8Q96EF0 704 aa9.69□□□□□ -0.86
TSC2-223ENST00000568566 AIFM3Q96NN9 605 aa9.69□□□□□ -0.86
TSC2-223ENST00000568566 SEZ6LQ9BYH1 1024 aa9.69□□□□□ -0.86
TSC2-223ENST00000568566 RIOX1Q9H6W3 641 aa9.69□□□□□ -0.86
TSC2-223ENST00000568566 CYP39A1Q9NYL5 469 aa9.69□□□□□ -0.86
TSC2-223ENST00000568566 BAZ2BQ9UIF8 2168 aaKnown RBP9.68□□□□□ -0.86
TSC2-223ENST00000568566 TET1Q8NFU7 2136 aa9.68□□□□□ -0.86
TSC2-223ENST00000568566 ZBTB43O43298 467 aa9.68□□□□□ -0.86
TSC2-223ENST00000568566 TLL1O43897 1013 aa9.68□□□□□ -0.86
TSC2-223ENST00000568566 MYL3P08590 195 aa9.68□□□□□ -0.86
TSC2-223ENST00000568566 HMGB1P09429 215 aaKnown RBP9.68□□□□□ -0.86
TSC2-223ENST00000568566 FDX1P10109 184 aa9.68□□□□□ -0.86
TSC2-223ENST00000568566 ACTN1P12814 892 aa9.68□□□□□ -0.86
TSC2-223ENST00000568566 POU3F3P20264 500 aaPredicted RBP9.68□□□□□ -0.86
TSC2-223ENST00000568566 EVCP57679 992 aa9.68□□□□□ -0.86
TSC2-223ENST00000568566 FGD1P98174 961 aa9.68□□□□□ -0.86
TSC2-223ENST00000568566 PURAQ00577 322 aaKnown RBP9.68□□□□□ -0.86
TSC2-223ENST00000568566 GRB10Q13322 594 aa9.68□□□□□ -0.86
TSC2-223ENST00000568566 TKFCQ3LXA3 575 aa9.68□□□□□ -0.86
TSC2-223ENST00000568566 DUSP28Q4G0W2 176 aa9.68□□□□□ -0.86
TSC2-223ENST00000568566 FAM47CQ5HY64 1035 aa9.68□□□□□ -0.86
TSC2-223ENST00000568566 PPP4R3BQ5MIZ7 849 aa9.68□□□□□ -0.86
TSC2-223ENST00000568566 TYW1BQ6NUM6 668 aa9.68□□□□□ -0.86
TSC2-223ENST00000568566 HERC6Q8IVU3 1022 aa9.68□□□□□ -0.86
TSC2-223ENST00000568566 GPKOWQ92917 476 aaPredicted RBP eCLIP9.68□□□□□ -0.86
TSC2-223ENST00000568566 PHKBQ93100 1093 aa9.68□□□□□ -0.86
TSC2-223ENST00000568566 HLA-CQ95604 372 aa9.68□□□□□ -0.86
TSC2-223ENST00000568566 SLC9A7Q96T83 725 aa9.68□□□□□ -0.86
TSC2-223ENST00000568566 MTA3Q9BTC8 594 aa9.68□□□□□ -0.86
TSC2-223ENST00000568566 FTOQ9C0B1 505 aaKnown RBP eCLIP9.68□□□□□ -0.86
TSC2-223ENST00000568566 VTA1Q9NP79 307 aa9.68□□□□□ -0.86
TSC2-223ENST00000568566 C11orf16Q9NQ32 467 aa9.68□□□□□ -0.86
TSC2-223ENST00000568566 GJB4Q9NTQ9 266 aa9.68□□□□□ -0.86
TSC2-223ENST00000568566 COL20A1Q9P218 1284 aa9.68□□□□□ -0.86
TSC2-223ENST00000568566 CCPG1Q9ULG6 757 aa9.68□□□□□ -0.86
TSC2-223ENST00000568566 COG5Q9UP83 839 aa9.68□□□□□ -0.86
TSC2-223ENST00000568566 Q9Y3F1 56 aa9.68□□□□□ -0.86
TSC2-223ENST00000568566 V9GY48 417 aaPredicted RBP9.68□□□□□ -0.86
TSC2-223ENST00000568566 SCN10AQ9Y5Y9 1956 aa9.68□□□□□ -0.86
TSC2-223ENST00000568566 CNTNAP5Q8WYK1 1306 aa9.67□□□□□ -0.86
TSC2-223ENST00000568566 PTPRSQ13332 1948 aa9.67□□□□□ -0.86
TSC2-223ENST00000568566 ICAM1P05362 532 aa9.67□□□□□ -0.86
TSC2-223ENST00000568566 SUPT20HL2P0C7V6 817 aa9.67□□□□□ -0.86
TSC2-223ENST00000568566 SCRN1Q12765 414 aa9.67□□□□□ -0.86
TSC2-223ENST00000568566 PKN1Q16512 942 aa9.67□□□□□ -0.86
TSC2-223ENST00000568566 RTN1Q16799 776 aa9.67□□□□□ -0.86
TSC2-223ENST00000568566 GPATCH4Q5T3I0 446 aaKnown RBP9.67□□□□□ -0.86
TSC2-223ENST00000568566 TMTC2Q8N394 836 aa9.67□□□□□ -0.86
TSC2-223ENST00000568566 FBXL16Q8N461 479 aa9.67□□□□□ -0.86
TSC2-223ENST00000568566 GDPD5Q8WTR4 605 aa9.67□□□□□ -0.86
TSC2-223ENST00000568566 ZFP91Q96JP5 570 aaPredicted RBP9.67□□□□□ -0.86
TSC2-223ENST00000568566 WDR11Q9BZH6 1224 aa9.67□□□□□ -0.86
TSC2-223ENST00000568566 POLR3EQ9NVU0 708 aa9.67□□□□□ -0.86
TSC2-223ENST00000568566 LCHNA4D1U4 455 aa9.66□□□□□ -0.86
TSC2-223ENST00000568566 JAK2O60674 1132 aa9.66□□□□□ -0.86
TSC2-223ENST00000568566 LPXNO60711 386 aa9.66□□□□□ -0.86
TSC2-223ENST00000568566 RFC2P35250 354 aa9.66□□□□□ -0.86
TSC2-223ENST00000568566 NT5C2P49902 561 aa9.66□□□□□ -0.86
TSC2-223ENST00000568566 CPT1AP50416 773 aa9.66□□□□□ -0.86
TSC2-223ENST00000568566 METAP2P50579 478 aaKnown RBP eCLIP9.66□□□□□ -0.86
TSC2-223ENST00000568566 ALDH5A1P51649 535 aaPredicted RBP9.66□□□□□ -0.86
TSC2-223ENST00000568566 FOSBP53539 338 aa9.66□□□□□ -0.86
TSC2-223ENST00000568566 CHMP4BP1P59074 171 aa9.66□□□□□ -0.86
TSC2-223ENST00000568566 BAATQ14032 418 aaPredicted RBP9.66□□□□□ -0.86
TSC2-223ENST00000568566 NBPF20Q3BBV1 942 aa9.66□□□□□ -0.86
TSC2-223ENST00000568566 SLC30A10Q6XR72 485 aa9.66□□□□□ -0.86
TSC2-223ENST00000568566 TMCO2Q7Z6W1 182 aaPredicted RBP9.66□□□□□ -0.86
TSC2-223ENST00000568566 RETREG2Q8NC44 543 aa9.66□□□□□ -0.86
TSC2-223ENST00000568566 OR6J1Q8NGC5 347 aa9.66□□□□□ -0.86
TSC2-223ENST00000568566 CTCFLQ8NI51 663 aaPredicted RBP9.66□□□□□ -0.86
TSC2-223ENST00000568566 MORC4Q8TE76 937 aa9.66□□□□□ -0.86
TSC2-223ENST00000568566 MTG1Q9BT17 334 aaPredicted RBP9.66□□□□□ -0.86
TSC2-223ENST00000568566 MTUS1Q9ULD2 1270 aa9.66□□□□□ -0.86
TSC2-223ENST00000568566 ARIH1Q9Y4X5 557 aaPredicted RBP9.66□□□□□ -0.86
TSC2-223ENST00000568566 PTPDC1A2A3K4 754 aa9.65□□□□□ -0.86
TSC2-223ENST00000568566 KIF28PB7ZC32 967 aa9.65□□□□□ -0.86
TSC2-223ENST00000568566 RBAK-RBAKDNI3L0D1 243 aa9.65□□□□□ -0.86
TSC2-223ENST00000568566 PITPNM1O00562 1244 aa9.65□□□□□ -0.86
TSC2-223ENST00000568566 ZBTB5O15062 677 aa9.65□□□□□ -0.86
TSC2-223ENST00000568566 PFKFB2O60825 505 aa9.65□□□□□ -0.86
TSC2-223ENST00000568566 IQCF3P0C7M6 154 aa9.65□□□□□ -0.86
TSC2-223ENST00000568566 FDPSP14324 419 aaKnown RBP9.65□□□□□ -0.86
TSC2-223ENST00000568566 HOXA13P31271 388 aaPredicted RBP9.65□□□□□ -0.86
TSC2-223ENST00000568566 KCNJ6P48051 423 aa9.65□□□□□ -0.86
TSC2-223ENST00000568566 WWC2Q6AWC2 1192 aa9.65□□□□□ -0.86
TSC2-223ENST00000568566 SYNE3Q6ZMZ3 975 aa9.65□□□□□ -0.86
TSC2-223ENST00000568566 FBXO11Q86XK2 927 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms